mRNA_L-elsbetiae_contig7335.16209.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7335.16209.1 vs. uniprot
Match: A0A835ZJK2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJK2_9STRA) HSP 1 Score: 162 bits (410), Expect = 2.590e-39 Identity = 110/364 (30.22%), Postives = 158/364 (43.41%), Query Frame = 1 Query: 487 DSRRAILLKLTCLNLFLALILIIVGGVGPQYPGHSGTTNNPVPNWGSRRLTTHVSPLYQANCPTEEVDSANASILRSALIVGLVIWFTQPCSAHFISTQVDRAGAAATLLTSVASALTCLGSFVVVMLDINYIAGCCSLLEDNCEVSNLCTQFVDDCCIGNDV-----------------------------------------------------------------------------------------------------------------EDYCGNPSYHIGAVSMIFLVFVSTMSMVIMASTITCRCWLDSDPEKQAMLMVLTGSPY--GSPRGSAHPESPTFSPRSTLLSGLGFGG 1233 D R+ ILL++T +NL L ++++++ +GP YPGH +G+ S +Y C + EV AN SIL SALI G+VIW QP +A I QV + GA TLL+S A+TC +F+V++LD+ Y+A CC+ L++ CE S+LCT+ +D CCIG V E YC +P Y SMIF+VF+ST + +MA TI C+CWLD+DPEKQA++MV++ SP+ S+ +P F+P + G FGG Sbjct: 70 DLRQVILLRMTYVNLALGVVMVVLYALGPSYPGH----------FGALTQARADSVIYGDTCASGEVADANDSILHSALIAGVVIWMLQPVAAWAIHKQVGQRGAHCTLLSSCVCAVTCACAFLVILLDMEYVADCCAQLQNECERSDLCTELIDTCCIGASVXXXXXXXXXXXXXXXXXXXXXVVSSSQYLMIEFILKSVVSALHDEYYNRRMYESDENHDSDSRSRCATHCERNRLYRQLMTSCMELVDMCGDEHKHGLIASSLLSLRCLDQQQESYCEDPKYRYAGASMIFVVFISTFAQAMMACTIGCKCWLDADPEKQALMMVVSSSPHFNNGNFNSSTASTPMFTP--SPAGGQHFGG 421 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7335.16209.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7335.16209.1 >prot_L-elsbetiae_contig7335.16209.1 ID=prot_L-elsbetiae_contig7335.16209.1|Name=mRNA_L-elsbetiae_contig7335.16209.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=569bp QHLKNSRPVHQPAESSKIIEGTPDPSGNQRTSSLRLGGVRVFTEEKLPTEback to top mRNA from alignment at L-elsbetiae_contig7335:685..8334- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7335.16209.1 ID=mRNA_L-elsbetiae_contig7335.16209.1|Name=mRNA_L-elsbetiae_contig7335.16209.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7650bp|location=Sequence derived from alignment at L-elsbetiae_contig7335:685..8334- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7335:685..8334- >mRNA_L-elsbetiae_contig7335.16209.1 ID=mRNA_L-elsbetiae_contig7335.16209.1|Name=mRNA_L-elsbetiae_contig7335.16209.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3414bp|location=Sequence derived from alignment at L-elsbetiae_contig7335:685..8334- (Laminarionema elsbetiae ELsaHSoW15)back to top |