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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 515 |
Cds size | 321 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816816.6355484-UTR-L-elsbetiae_contig7331:4675..4723 | 1622816816.6355484-UTR-L-elsbetiae_contig7331:4675..4723 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7331 4676..4723 + |
1691683835.6746159-UTR-L-elsbetiae_contig7331:4675..4723 | 1691683835.6746159-UTR-L-elsbetiae_contig7331:4675..4723 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7331 4676..4723 + |
1622816816.6633806-UTR-L-elsbetiae_contig7331:5044..5190 | 1622816816.6633806-UTR-L-elsbetiae_contig7331:5044..5190 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7331 5045..5190 + |
1691683835.699941-UTR-L-elsbetiae_contig7331:5044..5190 | 1691683835.699941-UTR-L-elsbetiae_contig7331:5044..5190 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7331 5045..5190 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816816.6483257-CDS-L-elsbetiae_contig7331:4723..5044 | 1622816816.6483257-CDS-L-elsbetiae_contig7331:4723..5044 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7331 4724..5044 + |
1691683835.6864731-CDS-L-elsbetiae_contig7331:4723..5044 | 1691683835.6864731-CDS-L-elsbetiae_contig7331:4723..5044 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7331 4724..5044 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7331.16204.1 >prot_L-elsbetiae_contig7331.16204.1 ID=prot_L-elsbetiae_contig7331.16204.1|Name=mRNA_L-elsbetiae_contig7331.16204.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=107bp
MSKLPGTASCLGSSEYDKAPAGGGEEEEEPRGSSSTAPTHPTLLLPALLP KRGRPEPVAAVRLGWASRLADAASSPAAAEEIDRSGPDVAEDLVGENTPL SVPLVR* back to topmRNA from alignment at L-elsbetiae_contig7331:4676..5190+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig7331.16204.1 ID=mRNA_L-elsbetiae_contig7331.16204.1|Name=mRNA_L-elsbetiae_contig7331.16204.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=515bp|location=Sequence derived from alignment at L-elsbetiae_contig7331:4676..5190+ (Laminarionema elsbetiae ELsaHSoW15) GCGCCGCCGAGACTGCCGCCTACACCCCCCGTCGCCCCTCTCTCCGCGAT
GAGCAAGCTTCCGGGCACGGCAAGCTGCCTGGGCAGCTCAGAGTATGATA
AGGCGCCGGCGGGAGGAGGAGAAGAAGAAGAAGAGCCCCGTGGTTCGTCG
AGCACGGCGCCCACCCATCCCACGCTGCTGCTGCCGGCGCTGTTGCCGAA
GAGAGGGCGGCCCGAGCCCGTCGCCGCTGTCCGCCTCGGCTGGGCCAGCC
GATTGGCCGACGCCGCCTCATCGCCTGCGGCGGCGGAGGAGATAGATCGC
AGCGGCCCCGACGTGGCCGAAGACCTTGTCGGAGAAAACACGCCTTTGTC
GGTGCCGTTGGTGCGGTGAGAATGGACGACAGGCGTTCTGTTGGTCTGCG
CCCCTGGAATCCATCGGAACGGCTCCTCCTGCTCGTTCGCGTTGGCCGCC
CCCGCCACGAGAGAAACCCTCGCGCCCGTCTTAGCCCTCGCCCTGCCCGG
CCCCGCCAGTGCTGC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig7331:4676..5190+ >mRNA_L-elsbetiae_contig7331.16204.1 ID=mRNA_L-elsbetiae_contig7331.16204.1|Name=mRNA_L-elsbetiae_contig7331.16204.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=642bp|location=Sequence derived from alignment at L-elsbetiae_contig7331:4676..5190+ (Laminarionema elsbetiae ELsaHSoW15) ATGAGCAAGCTTCCGGGCACGGCAAGCTGCCTGGGCAGCTCAGAGTATGA TAAGGCGCCGGCGGGAGGAGGAGAAGAAGAAGAAGAGCCCCGTGGTTCGT CGAGCACGGCGCCCACCCATCCCACGCTGCTGCTGCCGGCGCTGTTGCCG AAGAGAGGGCGGCCCGAGCCCGTCGCCGCTGTCCGCCTCGGCTGGGCCAG CCGATTGGCCGACGCCGCCTCATCGCCTGCGGCGGCGGAGGAGATAGATC GCAGCGGCCCCGACGTGGCCGAAGACCTTGTCGGAGAAAACACGCCTTTG TCGGTGCCGTTGGTGCGGTGAATGAGCAAGCTTCCGGGCACGGCAAGCTG CCTGGGCAGCTCAGAGTATGATAAGGCGCCGGCGGGAGGAGGAGAAGAAG AAGAAGAGCCCCGTGGTTCGTCGAGCACGGCGCCCACCCATCCCACGCTG CTGCTGCCGGCGCTGTTGCCGAAGAGAGGGCGGCCCGAGCCCGTCGCCGC TGTCCGCCTCGGCTGGGCCAGCCGATTGGCCGACGCCGCCTCATCGCCTG CGGCGGCGGAGGAGATAGATCGCAGCGGCCCCGACGTGGCCGAAGACCTT GTCGGAGAAAACACGCCTTTGTCGGTGCCGTTGGTGCGGTGA back to top
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