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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 836 |
Cds size | 453 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816805.1465378-UTR-L-elsbetiae_contig723:20356..20579 | 1622816805.1465378-UTR-L-elsbetiae_contig723:20356..20579 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig723 20357..20579 + |
1691683826.6431167-UTR-L-elsbetiae_contig723:20356..20579 | 1691683826.6431167-UTR-L-elsbetiae_contig723:20356..20579 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig723 20357..20579 + |
1622816805.1672873-UTR-L-elsbetiae_contig723:21032..21192 | 1622816805.1672873-UTR-L-elsbetiae_contig723:21032..21192 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig723 21033..21192 + |
1691683826.6633928-UTR-L-elsbetiae_contig723:21032..21192 | 1691683826.6633928-UTR-L-elsbetiae_contig723:21032..21192 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig723 21033..21192 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816805.1571183-CDS-L-elsbetiae_contig723:20579..21032 | 1622816805.1571183-CDS-L-elsbetiae_contig723:20579..21032 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig723 20580..21032 + |
1691683826.6531572-CDS-L-elsbetiae_contig723:20579..21032 | 1691683826.6531572-CDS-L-elsbetiae_contig723:20579..21032 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig723 20580..21032 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig723.16087.1 >prot_L-elsbetiae_contig723.16087.1 ID=prot_L-elsbetiae_contig723.16087.1|Name=mRNA_L-elsbetiae_contig723.16087.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=151bp
MSVVTFRQSRRPRYLRRAQKTKHTIKCPHRTRTTKDQTEITARRLGSFKE PGRKEPVCGCFHLAGYIWDIFEDQTRSFFLLVACYEKSGVKKRWHNKSIY PKQRNAHGGSELPPLLPPPRITAFESNRHKMRQAGSPREARGIRAALKKR * back to topmRNA from alignment at L-elsbetiae_contig723:20357..21192+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig723.16087.1 ID=mRNA_L-elsbetiae_contig723.16087.1|Name=mRNA_L-elsbetiae_contig723.16087.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=836bp|location=Sequence derived from alignment at L-elsbetiae_contig723:20357..21192+ (Laminarionema elsbetiae ELsaHSoW15) AACGCAAATCTCCGAAAAAATAGGGCGGAAAGACCCGTCAAGGACGGGCC
GGGCCACCACCGCAGAAAGGCAACCAGCTAGAGTGTCATAGCAGGTAAAA
CCGCACAAGGCTGAGGTTCTATTTGATAGAAGTAGTAGTAAAAATAAAAA
GAATAAAACACGAAATCAGCCGGGCGAGCAGCGAAAAGACACAAAGCGAA
GCCCGTTGTCTGATGTGTGTTGTATGTCTGTCGTAACTTTCCGTCAATCA
AGGCGCCCGAGATATCTCAGGCGGGCCCAAAAAACGAAGCACACAATCAA
ATGCCCACACAGAACCCGAACCACCAAAGACCAAACCGAAATCACTGCCC
GTAGGTTAGGTTCTTTTAAAGAGCCTGGTAGAAAGGAACCGGTGTGCGGT
TGTTTCCACTTGGCAGGATACATATGGGACATTTTTGAGGACCAAACGCG
TTCATTCTTTCTTCTTGTCGCGTGCTACGAAAAAAGTGGCGTTAAAAAGC
GCTGGCACAATAAATCCATATACCCAAAACAGAGAAACGCCCATGGTGGA
AGTGAACTTCCTCCCCTTCTACCCCCCCCCCGCATCACGGCGTTCGAATC
GAATCGACATAAGATGAGACAAGCTGGGAGCCCTCGCGAAGCGCGTGGAA
TCCGGGCCGCTCTTAAAAAGAGGTGAAAACATAGACTTGGGGCTTCCGTG
AAGCAAAACTGAAACCCGAGTACAGCCATCATCAAATGTGAGTTAGTTCT
TAACATCGAAACGATGGCGCGATGGCGACTCTAGAGTCACCAACCCGCAC
GCCGAAGCACGAACAGCAGCAAAACCGAAGGAGGAA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig723:20357..21192+ >mRNA_L-elsbetiae_contig723.16087.1 ID=mRNA_L-elsbetiae_contig723.16087.1|Name=mRNA_L-elsbetiae_contig723.16087.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=906bp|location=Sequence derived from alignment at L-elsbetiae_contig723:20357..21192+ (Laminarionema elsbetiae ELsaHSoW15) ATGTCTGTCGTAACTTTCCGTCAATCAAGGCGCCCGAGATATCTCAGGCG GGCCCAAAAAACGAAGCACACAATCAAATGCCCACACAGAACCCGAACCA CCAAAGACCAAACCGAAATCACTGCCCGTAGGTTAGGTTCTTTTAAAGAG CCTGGTAGAAAGGAACCGGTGTGCGGTTGTTTCCACTTGGCAGGATACAT ATGGGACATTTTTGAGGACCAAACGCGTTCATTCTTTCTTCTTGTCGCGT GCTACGAAAAAAGTGGCGTTAAAAAGCGCTGGCACAATAAATCCATATAC CCAAAACAGAGAAACGCCCATGGTGGAAGTGAACTTCCTCCCCTTCTACC CCCCCCCCGCATCACGGCGTTCGAATCGAATCGACATAAGATGAGACAAG CTGGGAGCCCTCGCGAAGCGCGTGGAATCCGGGCCGCTCTTAAAAAGAGG TGAATGTCTGTCGTAACTTTCCGTCAATCAAGGCGCCCGAGATATCTCAG GCGGGCCCAAAAAACGAAGCACACAATCAAATGCCCACACAGAACCCGAA CCACCAAAGACCAAACCGAAATCACTGCCCGTAGGTTAGGTTCTTTTAAA GAGCCTGGTAGAAAGGAACCGGTGTGCGGTTGTTTCCACTTGGCAGGATA CATATGGGACATTTTTGAGGACCAAACGCGTTCATTCTTTCTTCTTGTCG CGTGCTACGAAAAAAGTGGCGTTAAAAAGCGCTGGCACAATAAATCCATA TACCCAAAACAGAGAAACGCCCATGGTGGAAGTGAACTTCCTCCCCTTCT ACCCCCCCCCCGCATCACGGCGTTCGAATCGAATCGACATAAGATGAGAC AAGCTGGGAGCCCTCGCGAAGCGCGTGGAATCCGGGCCGCTCTTAAAAAG AGGTGA back to top
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