mRNA_L-elsbetiae_contig7214.16063.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: D7FV16_ECTSI (PUB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV16_ECTSI) HSP 1 Score: 348 bits (892), Expect = 3.640e-117 Identity = 241/283 (85.16%), Postives = 250/283 (88.34%), Query Frame = 1 Query: 1 RLEDELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEAEVTAAVSLHESREAVSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGGNATEKKAA------ILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLELDERF 831 RLEDELSKKV+KFE+RL+ETDPV+GAPRYGESMTAKVVALGAKHQ LL+RL Q+EAE+TAAVS HESREAVSAEEA+KREVERQ XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX XXX X REREAQEL SSVAVGAAGVEDGLRRIDDACGG EKKAA ILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLK+ELDERF Sbjct: 42 RLEDELSKKVSKFERRLNETDPVSGAPRYGESMTAKVVALGAKHQALLERLPQLEAEITAAVSQHESREAVSAEEARKREVERQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTREREAQELASSVAVGAAGVEDGLRRIDDACGGKPAEKKAAVQALQQILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKMELDERF 324
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A835YSV6_9STRA (PUB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSV6_9STRA) HSP 1 Score: 159 bits (403), Expect = 2.380e-43 Identity = 135/283 (47.70%), Postives = 170/283 (60.07%), Query Frame = 1 Query: 4 LEDELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEAEVTAAVSLHESREAVSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGG---NATEKKAA-----ILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLELDER 828 +E EL K+AKFEKRL+ETDP++G RYGE M AKV L ++ L L E ++ AA++ H + XXXXXXXXXXXXXXXXXXXXXXX XXX XXX REREA + +SV VGAAGVE GLR + DACGG +A +K IL+N+ S+PEDPRFRRI+ +NE F +GRFEG +Q+LLSSGF++ VEEG ++LVM EPDL+ DMDGWT WY + + ++RL E + R Sbjct: 43 VEGELQGKMAKFEKRLTETDPISGQLRYGEGMRAKVAQLQQQYDALAAELRLAEGKLAAALAAHANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLAREAAVLRDKKKADXXXXXXXXXXARLAREREAAAIMASVPVGAAGVEAGLRALRDACGGGGGSAQMRKTCGALLQILQNMRSSPEDPRFRRIRCENERFAADVGRFEGAVQVLLSSGFKVVVEEGASLLVMAEPDLATDMDGWTTWYDTLKDTIDRLNDETNAR 325
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: G4ZJA0_PHYSP (PUB domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJA0_PHYSP) HSP 1 Score: 92.4 bits (228), Expect = 1.360e-18 Identity = 94/276 (34.06%), Postives = 141/276 (51.09%), Query Frame = 1 Query: 28 VAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEA--EVTAAVSLHESREAVSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGGNAT-----EKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFR--MQVEEGQ--TVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLELD 822 + KF R S DPVT PR+G +M AKV Q LL+R +++ E A + L E++ A AE A+++E ER XXXXX + L+ XXXXXXXXX +E R E E ++L +S+ G G+E + + D+ G A +K A++ N+ S+PE+ FR I ++N +F LG++ GG Q LL+ GF+ Q +E Q V V+ EPDLSED+D W+ W+ + E ++ +L+ Sbjct: 2 IEKFRARCSMVDPVTNQPRFGPNMLAKV-------QDLLRRYDEVKLAMEEEAPLRLQEAQRA--AELAREQEQERHLQGARXXXXXQQ------------REELQRIEALAAAAXXXXXXXXXXXXXEELLRQL-----EEEEREKLNASIPHGKEGLERAIAMLKDSTGSEALYRQSLQKLLAVVSNICSSPENTAFRHIPKENAHFHADLGQYAGGHQCLLALGFKELQQGDEAQLRAVFVLEEPDLSEDLDAWSNWFDELKEMQSFVEYKLN 251
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A7S1YSV5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YSV5_TRICV) HSP 1 Score: 87.4 bits (215), Expect = 5.410e-16 Identity = 92/283 (32.51%), Postives = 143/283 (50.53%), Query Frame = 1 Query: 25 KVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLG------------QIEAEVTAAVSLHESREAVSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGGNATEKKAA------ILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLEL 819 K +F KRL+E DP+T APRYG +VVA+ K+ L +G Q++ EV A V +++ + ++ +K+E E XX XXXXXXXXXXXXXXXXXX XXX XX R +S+ GA GV + L + D + + + A I +A++PE+ ++RRI+RD+ F +GR GG ++L+++GF+++ +G + EPD+ DMDGW+ W+ I + +E ++ E+ Sbjct: 120 KAGRFRKRLAERDPITDAPRYGGKTMGRVVAMLEKYDALRVGIGMAFGGNQPGEGHQMDGEVLADVMRKLAKQEKAIKDQEKQEAETGKVDVESRREAEALALKELQKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRA-----FVASIKKGADGVREQLAAMRDGTSSDPSGHRKALDSLHMIFNQIAAHPEEMKYRRIRRDHPKFMEDIGRHPGGKELLIAAGFKLETLDGVSCFFSKEPDIENDMDGWSAWFDAIKQTLEIIEEEM 397
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A6A3IUC9_9STRA (PUB domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IUC9_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.600e-15 Identity = 107/292 (36.64%), Postives = 156/292 (53.42%), Query Frame = 1 Query: 13 ELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEAEVTAAVSLHESREA----VSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAK---------QEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGGNAT-----EKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEG-----QTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLEL 819 E+ + KF R S DPVT PR+G M AKV Q LL+R +++ + L EA ++AEEA K++ + XXXXXXXXXXXX + +LE XXXXXXXXXXXXXXX AA +E A XXX E + L +S+ G G+E + + ++ A +K A++ N+ S+PE+ FR I +DN +F LG++ GG Q LL+ GF+ ++++G + V V+ EPDLSED+D W+ W+ + E ++ +L Sbjct: 60 EMDDMMEKFRARCSMVDPVTNQPRFGPKMLAKV-------QDLLRRYDEVKVAMEEDAPLGLQVEAKINQLTAEEAAKKQ---EQAARXXXXXXXXXXXXLAREQEQERLLLEAREXXXXXXXXXXXXXXXLAAXXXXXXXQRGKERAEXXXXRQLEGEERERLNASIPHGKEGLEKAIAMLRNSTASEALFRQSLQKLLAVVSNICSSPENAAFRHIPKDNAHFHADLGQYAGGPQCLLALGFK-ELQQGDEAHPRAVFVLEEPDLSEDLDAWSNWFDELKEMQSLVESKL 340
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A6U3X4B2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3X4B2_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 3.710e-15 Identity = 48/140 (34.29%), Postives = 75/140 (53.57%), Query Frame = 1 Query: 445 EREAQE----LTSSVAVGAAGVEDGLRRIDDACGGNAT---EKK--------AAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLEL 819 E EA+E +SV G GV + I +AC N EK+ I + S PE+P+FRRI+RD+ F +GR GG +I ++SGFR+ EG + EP++ DMDGW++W+ + E ++ ++ E+ Sbjct: 78 EEEAREADRAFVASVPRGGDGVRAQIGLIREACRSNTDGSGEKEWNTAIGALHTIFTQIMSRPEEPKFRRIRRDHPKFLEDVGRHPGGKEIFIASGFRLDNIEGVSCFFSKEPNIEHDMDGWSDWFNELKETLQIIEEEM 217
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A8K1FKC0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKC0_PYTOL) HSP 1 Score: 84.0 bits (206), Expect = 5.220e-15 Identity = 100/281 (35.59%), Postives = 152/281 (54.09%), Query Frame = 1 Query: 4 LEDELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEAEVTAAVSL---HESREAVSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGGNAT-----EKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFR-MQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLEL 819 +E E+ + KF R + DPVT PR+G AKV+ + ++ L + +G E TA S+ H+ ++A + XXXXXXXXXXXXXXXXXXXXXX A+ E XX + +Q XXX XXX+ER Q+ +SV VG G++D + ++ G T +K ++ NV + PE +R I +DN +F + +G+++GG + LL+ GF+ ++ E + V +M EPDLSED+D W+ W+ + + E L+ L Sbjct: 52 VEGEVDVTMEKFRARSTMVDPVTNEPRFGPKTLAKVLDMLLRYDALKENVGSGEVLRTARKSIEAFHKEQQAHAQRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARRAQELEQXXIAELARLAQQKRIEREQQXXXXXXXXXXXQERLNQQ-NASVQVGVEGLQDAISTLETNLGDPKTFRSVLQKLHVLIGNVCAAPEKTEYRHIPKDNAHFHQDIGQYQGGHECLLTMGFKELEPEPTKRVFIMEEPDLSEDLDRWSAWFDGLKDMKELLEQRL 331
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A833S132_PHYIN (PUB domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833S132_PHYIN) HSP 1 Score: 77.0 bits (188), Expect = 3.520e-14 Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 547 EKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFR--MQVEEGQ--TVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLEL 819 +K A++RN+ +PE+ FR I +DN +F LG++ GG Q LL+ GF+ Q +E Q V V+ EPDLSED+D W+ W+ + E ++ +L Sbjct: 21 QKLLAVVRNICQSPENAAFRHIPKDNAHFHADLGQYPGGHQCLLAMGFKELQQGDETQPRNVFVLEEPDLSEDLDAWSSWFDELKELQSLVESKL 115
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A3F2RTW5_9STRA (PUB domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RTW5_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 6.410e-14 Identity = 44/135 (32.59%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 457 QELTSSVAVGAAGVEDGLRRIDDACGGNAT-----EKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQT-----VLVMNEPDLSEDMDGWTEWYKHITEAVERLKLELDERF 831 + L +S+ G G+E+ + + D+ G A K A++ N+ S+PE+ FR I + N NF LG++ GG Q +L+ GFR ++++G + V V+ EPDLSED D W+ W+ + + +K ++ +F Sbjct: 124 ERLNASIQHGKEGLENAITMLQDSTGSEALFHRSLGKLLAVVSNICSSPENAAFRHIPKGNANFHTDLGQYTGGHQCILALGFR-ELQQGDSTQSRAVFVLEEPDLSEDFDAWSNWFDELKD----MKSLIESKF 253
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: F0WG38_9STRA (Uncharacterized protein AlNc14C87G5567 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG38_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 7.340e-14 Identity = 78/272 (28.68%), Postives = 121/272 (44.49%), Query Frame = 1 Query: 10 DELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEAEVTAAVSLHESRE-AVSAEEAQ----KREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXR-EREAQELTS---SVAVGAAGVEDGL----RRIDD-ACGGNATEKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEE--GQTVLVMNEPDLSEDMDGWTEWY 777 ++LS V++ EKR DPVT APR+G M KV AL ++R + E+ + L + + + E + K +VE+ XX QA ++ AR + R + E Q+L + +V +G G+ L R +DD A + +K I+ N+ S PE +R+I +DN FQ G+FEGG LLS GF+ +E +T+ + EPD++EDMD WT+W+ Sbjct: 63 EKLSTLVSRLEKRTKMMDPVTKAPRFGPRMLEKVNAL-------IRRFDAWKLELETSDVLRDIKSMGLCLRERKLCKLKEKVEQSRLSKVEEVRREHELLQMVREDXXXXXXXRIVKDEIERQNLTMLARQAQAIREAKARKLEEDALRSDEELQKLNAQKEAVVLGKEGLRQALLTLERNVDDKALYRSKLDKVHKIVSNICSEPEKELYRKIDKDNYRFQEDFGKFEGGYHFLLSMGFKEVYDEIESKTMFYLEEPDVNEDMDAWTDWF 327 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7214.16063.1 >prot_L-elsbetiae_contig7214.16063.1 ID=prot_L-elsbetiae_contig7214.16063.1|Name=mRNA_L-elsbetiae_contig7214.16063.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=278bp RLEDELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRback to top mRNA from alignment at L-elsbetiae_contig7214:1751..5861+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7214.16063.1 ID=mRNA_L-elsbetiae_contig7214.16063.1|Name=mRNA_L-elsbetiae_contig7214.16063.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4111bp|location=Sequence derived from alignment at L-elsbetiae_contig7214:1751..5861+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7214:1751..5861+ >mRNA_L-elsbetiae_contig7214.16063.1 ID=mRNA_L-elsbetiae_contig7214.16063.1|Name=mRNA_L-elsbetiae_contig7214.16063.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1668bp|location=Sequence derived from alignment at L-elsbetiae_contig7214:1751..5861+ (Laminarionema elsbetiae ELsaHSoW15)back to top |