mRNA_L-elsbetiae_contig7214.16063.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7214.16063.1
Unique NamemRNA_L-elsbetiae_contig7214.16063.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: D7FV16_ECTSI (PUB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV16_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 3.640e-117
Identity = 241/283 (85.16%), Postives = 250/283 (88.34%), Query Frame = 1
Query:    1 RLEDELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEAEVTAAVSLHESREAVSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGGNATEKKAA------ILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLELDERF 831
            RLEDELSKKV+KFE+RL+ETDPV+GAPRYGESMTAKVVALGAKHQ LL+RL Q+EAE+TAAVS HESREAVSAEEA+KREVERQ  XXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXX         XXX X  REREAQEL SSVAVGAAGVEDGLRRIDDACGG   EKKAA      ILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLK+ELDERF
Sbjct:   42 RLEDELSKKVSKFERRLNETDPVSGAPRYGESMTAKVVALGAKHQALLERLPQLEAEITAAVSQHESREAVSAEEARKREVERQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTREREAQELASSVAVGAAGVEDGLRRIDDACGGKPAEKKAAVQALQQILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKMELDERF 324          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A835YSV6_9STRA (PUB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSV6_9STRA)

HSP 1 Score: 159 bits (403), Expect = 2.380e-43
Identity = 135/283 (47.70%), Postives = 170/283 (60.07%), Query Frame = 1
Query:    4 LEDELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEAEVTAAVSLHESREAVSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGG---NATEKKAA-----ILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLELDER 828
            +E EL  K+AKFEKRL+ETDP++G  RYGE M AKV  L  ++  L   L   E ++ AA++ H +                 XXXXXXXXXXXXXXXXXXXXXXX      XXX                        XXX    REREA  + +SV VGAAGVE GLR + DACGG   +A  +K       IL+N+ S+PEDPRFRRI+ +NE F   +GRFEG +Q+LLSSGF++ VEEG ++LVM EPDL+ DMDGWT WY  + + ++RL  E + R
Sbjct:   43 VEGELQGKMAKFEKRLTETDPISGQLRYGEGMRAKVAQLQQQYDALAAELRLAEGKLAAALAAHANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLAREAAVLRDKKKADXXXXXXXXXXARLAREREAAAIMASVPVGAAGVEAGLRALRDACGGGGGSAQMRKTCGALLQILQNMRSSPEDPRFRRIRCENERFAADVGRFEGAVQVLLSSGFKVVVEEGASLLVMAEPDLATDMDGWTTWYDTLKDTIDRLNDETNAR 325          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: G4ZJA0_PHYSP (PUB domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJA0_PHYSP)

HSP 1 Score: 92.4 bits (228), Expect = 1.360e-18
Identity = 94/276 (34.06%), Postives = 141/276 (51.09%), Query Frame = 1
Query:   28 VAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEA--EVTAAVSLHESREAVSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGGNAT-----EKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFR--MQVEEGQ--TVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLELD 822
            + KF  R S  DPVT  PR+G +M AKV       Q LL+R  +++   E  A + L E++ A  AE A+++E ER      XXXXX              +  L+         XXXXXXXXX    +E  R        E E ++L +S+  G  G+E  +  + D+ G  A      +K  A++ N+ S+PE+  FR I ++N +F   LG++ GG Q LL+ GF+   Q +E Q   V V+ EPDLSED+D W+ W+  + E    ++ +L+
Sbjct:    2 IEKFRARCSMVDPVTNQPRFGPNMLAKV-------QDLLRRYDEVKLAMEEEAPLRLQEAQRA--AELAREQEQERHLQGARXXXXXQQ------------REELQRIEALAAAAXXXXXXXXXXXXXEELLRQL-----EEEEREKLNASIPHGKEGLERAIAMLKDSTGSEALYRQSLQKLLAVVSNICSSPENTAFRHIPKENAHFHADLGQYAGGHQCLLALGFKELQQGDEAQLRAVFVLEEPDLSEDLDAWSNWFDELKEMQSFVEYKLN 251          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A7S1YSV5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YSV5_TRICV)

HSP 1 Score: 87.4 bits (215), Expect = 5.410e-16
Identity = 92/283 (32.51%), Postives = 143/283 (50.53%), Query Frame = 1
Query:   25 KVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLG------------QIEAEVTAAVSLHESREAVSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGGNATEKKAA------ILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLEL 819
            K  +F KRL+E DP+T APRYG     +VVA+  K+  L   +G            Q++ EV A V    +++  + ++ +K+E E                       XX      XXXXXXXXXXXXXXXXXX         XXX XX R        +S+  GA GV + L  + D    + +  + A      I   +A++PE+ ++RRI+RD+  F   +GR  GG ++L+++GF+++  +G +     EPD+  DMDGW+ W+  I + +E ++ E+
Sbjct:  120 KAGRFRKRLAERDPITDAPRYGGKTMGRVVAMLEKYDALRVGIGMAFGGNQPGEGHQMDGEVLADVMRKLAKQEKAIKDQEKQEAETGKVDVESRREAEALALKELQKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRA-----FVASIKKGADGVREQLAAMRDGTSSDPSGHRKALDSLHMIFNQIAAHPEEMKYRRIRRDHPKFMEDIGRHPGGKELLIAAGFKLETLDGVSCFFSKEPDIENDMDGWSAWFDAIKQTLEIIEEEM 397          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A6A3IUC9_9STRA (PUB domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IUC9_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.600e-15
Identity = 107/292 (36.64%), Postives = 156/292 (53.42%), Query Frame = 1
Query:   13 ELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEAEVTAAVSLHESREA----VSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAK---------QEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGGNAT-----EKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEG-----QTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLEL 819
            E+   + KF  R S  DPVT  PR+G  M AKV       Q LL+R  +++  +     L    EA    ++AEEA K++   +    XXXXXXXXXXXX        + +LE   XXXXXXXXXXXXXXX AA          +E A XXX       E + L +S+  G  G+E  +  + ++    A      +K  A++ N+ S+PE+  FR I +DN +F   LG++ GG Q LL+ GF+ ++++G     + V V+ EPDLSED+D W+ W+  + E    ++ +L
Sbjct:   60 EMDDMMEKFRARCSMVDPVTNQPRFGPKMLAKV-------QDLLRRYDEVKVAMEEDAPLGLQVEAKINQLTAEEAAKKQ---EQAARXXXXXXXXXXXXLAREQEQERLLLEAREXXXXXXXXXXXXXXXLAAXXXXXXXQRGKERAEXXXXRQLEGEERERLNASIPHGKEGLEKAIAMLRNSTASEALFRQSLQKLLAVVSNICSSPENAAFRHIPKDNAHFHADLGQYAGGPQCLLALGFK-ELQQGDEAHPRAVFVLEEPDLSEDLDAWSNWFDELKEMQSLVESKL 340          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A6U3X4B2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3X4B2_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.710e-15
Identity = 48/140 (34.29%), Postives = 75/140 (53.57%), Query Frame = 1
Query:  445 EREAQE----LTSSVAVGAAGVEDGLRRIDDACGGNAT---EKK--------AAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLEL 819
            E EA+E      +SV  G  GV   +  I +AC  N     EK+          I   + S PE+P+FRRI+RD+  F   +GR  GG +I ++SGFR+   EG +     EP++  DMDGW++W+  + E ++ ++ E+
Sbjct:   78 EEEAREADRAFVASVPRGGDGVRAQIGLIREACRSNTDGSGEKEWNTAIGALHTIFTQIMSRPEEPKFRRIRRDHPKFLEDVGRHPGGKEIFIASGFRLDNIEGVSCFFSKEPNIEHDMDGWSDWFNELKETLQIIEEEM 217          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A8K1FKC0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKC0_PYTOL)

HSP 1 Score: 84.0 bits (206), Expect = 5.220e-15
Identity = 100/281 (35.59%), Postives = 152/281 (54.09%), Query Frame = 1
Query:    4 LEDELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEAEVTAAVSL---HESREAVSAEEAQKREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXREREAQELTSSVAVGAAGVEDGLRRIDDACGGNAT-----EKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFR-MQVEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLEL 819
            +E E+   + KF  R +  DPVT  PR+G    AKV+ +  ++  L + +G  E   TA  S+   H+ ++A +            XXXXXXXXXXXXXXXXXXXXXX A+   E   XX             +  +Q    XXX XXX+ER  Q+  +SV VG  G++D +  ++   G   T     +K   ++ NV + PE   +R I +DN +F + +G+++GG + LL+ GF+ ++ E  + V +M EPDLSED+D W+ W+  + +  E L+  L
Sbjct:   52 VEGEVDVTMEKFRARSTMVDPVTNEPRFGPKTLAKVLDMLLRYDALKENVGSGEVLRTARKSIEAFHKEQQAHAQRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARRAQELEQXXIAELARLAQQKRIEREQQXXXXXXXXXXXQERLNQQ-NASVQVGVEGLQDAISTLETNLGDPKTFRSVLQKLHVLIGNVCAAPEKTEYRHIPKDNAHFHQDIGQYQGGHECLLTMGFKELEPEPTKRVFIMEEPDLSEDLDRWSAWFDGLKDMKELLEQRL 331          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A833S132_PHYIN (PUB domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833S132_PHYIN)

HSP 1 Score: 77.0 bits (188), Expect = 3.520e-14
Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 1
Query:  547 EKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFR--MQVEEGQ--TVLVMNEPDLSEDMDGWTEWYKHITEAVERLKLEL 819
            +K  A++RN+  +PE+  FR I +DN +F   LG++ GG Q LL+ GF+   Q +E Q   V V+ EPDLSED+D W+ W+  + E    ++ +L
Sbjct:   21 QKLLAVVRNICQSPENAAFRHIPKDNAHFHADLGQYPGGHQCLLAMGFKELQQGDETQPRNVFVLEEPDLSEDLDAWSSWFDELKELQSLVESKL 115          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: A0A3F2RTW5_9STRA (PUB domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RTW5_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 6.410e-14
Identity = 44/135 (32.59%), Postives = 76/135 (56.30%), Query Frame = 1
Query:  457 QELTSSVAVGAAGVEDGLRRIDDACGGNAT-----EKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQT-----VLVMNEPDLSEDMDGWTEWYKHITEAVERLKLELDERF 831
            + L +S+  G  G+E+ +  + D+ G  A       K  A++ N+ S+PE+  FR I + N NF   LG++ GG Q +L+ GFR ++++G +     V V+ EPDLSED D W+ W+  + +    +K  ++ +F
Sbjct:  124 ERLNASIQHGKEGLENAITMLQDSTGSEALFHRSLGKLLAVVSNICSSPENAAFRHIPKGNANFHTDLGQYTGGHQCILALGFR-ELQQGDSTQSRAVFVLEEPDLSEDFDAWSNWFDELKD----MKSLIESKF 253          
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Match: F0WG38_9STRA (Uncharacterized protein AlNc14C87G5567 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG38_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 7.340e-14
Identity = 78/272 (28.68%), Postives = 121/272 (44.49%), Query Frame = 1
Query:   10 DELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQRLGQIEAEVTAAVSLHESRE-AVSAEEAQ----KREVERQXXXXXXXXXXXXXXXXXXXXXXXAQSILEXXXXXXXXXXXXXXXXXXQAAKQEAARXXXDXXXR-EREAQELTS---SVAVGAAGVEDGL----RRIDD-ACGGNATEKKAAILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEE--GQTVLVMNEPDLSEDMDGWTEWY 777
            ++LS  V++ EKR    DPVT APR+G  M  KV AL       ++R    + E+  +  L + +   +   E +    K +VE+                      XX                        QA ++  AR   +   R + E Q+L +   +V +G  G+   L    R +DD A   +  +K   I+ N+ S PE   +R+I +DN  FQ   G+FEGG   LLS GF+   +E   +T+  + EPD++EDMD WT+W+
Sbjct:   63 EKLSTLVSRLEKRTKMMDPVTKAPRFGPRMLEKVNAL-------IRRFDAWKLELETSDVLRDIKSMGLCLRERKLCKLKEKVEQSRLSKVEEVRREHELLQMVREDXXXXXXXRIVKDEIERQNLTMLARQAQAIREAKARKLEEDALRSDEELQKLNAQKEAVVLGKEGLRQALLTLERNVDDKALYRSKLDKVHKIVSNICSEPEKELYRKIDKDNYRFQEDFGKFEGGYHFLLSMGFKEVYDEIESKTMFYLEEPDVNEDMDAWTDWF 327          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7214.16063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FV16_ECTSI3.640e-11785.16PUB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YSV6_9STRA2.380e-4347.70PUB domain-containing protein n=1 Tax=Tribonema mi... [more]
G4ZJA0_PHYSP1.360e-1834.06PUB domain-containing protein n=1 Tax=Phytophthora... [more]
A0A7S1YSV5_TRICV5.410e-1632.51Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6A3IUC9_9STRA1.600e-1536.64PUB domain-containing protein n=5 Tax=Phytophthora... [more]
A0A6U3X4B2_9STRA3.710e-1534.29Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A8K1FKC0_PYTOL5.220e-1535.59Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A833S132_PHYIN3.520e-1440.00PUB domain-containing protein n=1 Tax=Phytophthora... [more]
A0A3F2RTW5_9STRA6.410e-1432.59PUB domain-containing protein n=3 Tax=Phytophthora... [more]
F0WG38_9STRA7.340e-1428.68Uncharacterized protein AlNc14C87G5567 n=1 Tax=Alb... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7214contigL-elsbetiae_contig7214:1751..5861 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score351.3
Seed ortholog evalue4.2e-94
Seed eggNOG ortholog2880.D7FV16
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PUB domain
EggNOG OGs2BVEC@1,2S26D@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionPUB domain
Ec32 orthologEc-14_003810.1
Exons8
Model size834
Cds size834
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7214.16063.1prot_L-elsbetiae_contig7214.16063.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7214 1751..5861 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816803.312475-CDS-L-elsbetiae_contig7214:1750..18581622816803.312475-CDS-L-elsbetiae_contig7214:1750..1858Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7214 1751..1858 +
1691683825.4562924-CDS-L-elsbetiae_contig7214:1750..18581691683825.4562924-CDS-L-elsbetiae_contig7214:1750..1858Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7214 1751..1858 +
1622816803.3267224-CDS-L-elsbetiae_contig7214:2242..23681622816803.3267224-CDS-L-elsbetiae_contig7214:2242..2368Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7214 2243..2368 +
1691683825.4704723-CDS-L-elsbetiae_contig7214:2242..23681691683825.4704723-CDS-L-elsbetiae_contig7214:2242..2368Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7214 2243..2368 +
1622816803.3411725-CDS-L-elsbetiae_contig7214:2984..30651622816803.3411725-CDS-L-elsbetiae_contig7214:2984..3065Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7214 2985..3065 +
1691683825.482283-CDS-L-elsbetiae_contig7214:2984..30651691683825.482283-CDS-L-elsbetiae_contig7214:2984..3065Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7214 2985..3065 +
1622816803.3548412-CDS-L-elsbetiae_contig7214:3284..34091622816803.3548412-CDS-L-elsbetiae_contig7214:3284..3409Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7214 3285..3409 +
1691683825.4935362-CDS-L-elsbetiae_contig7214:3284..34091691683825.4935362-CDS-L-elsbetiae_contig7214:3284..3409Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7214 3285..3409 +
1622816803.3684502-CDS-L-elsbetiae_contig7214:4110..41801622816803.3684502-CDS-L-elsbetiae_contig7214:4110..4180Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7214 4111..4180 +
1691683825.5049682-CDS-L-elsbetiae_contig7214:4110..41801691683825.5049682-CDS-L-elsbetiae_contig7214:4110..4180Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7214 4111..4180 +
1622816803.3821568-CDS-L-elsbetiae_contig7214:4371..44221622816803.3821568-CDS-L-elsbetiae_contig7214:4371..4422Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7214 4372..4422 +
1691683825.5137007-CDS-L-elsbetiae_contig7214:4371..44221691683825.5137007-CDS-L-elsbetiae_contig7214:4371..4422Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7214 4372..4422 +
1622816803.3931553-CDS-L-elsbetiae_contig7214:4952..50901622816803.3931553-CDS-L-elsbetiae_contig7214:4952..5090Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7214 4953..5090 +
1691683825.5235403-CDS-L-elsbetiae_contig7214:4952..50901691683825.5235403-CDS-L-elsbetiae_contig7214:4952..5090Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7214 4953..5090 +
1622816803.4068043-CDS-L-elsbetiae_contig7214:5726..58611622816803.4068043-CDS-L-elsbetiae_contig7214:5726..5861Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7214 5727..5861 +
1691683825.5356827-CDS-L-elsbetiae_contig7214:5726..58611691683825.5356827-CDS-L-elsbetiae_contig7214:5726..5861Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7214 5727..5861 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7214.16063.1

>prot_L-elsbetiae_contig7214.16063.1 ID=prot_L-elsbetiae_contig7214.16063.1|Name=mRNA_L-elsbetiae_contig7214.16063.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=278bp
RLEDELSKKVAKFEKRLSETDPVTGAPRYGESMTAKVVALGAKHQTLLQR
LGQIEAEVTAAVSLHESREAVSAEEAQKREVERQEEEEARVRIRLAEAEE
ERRRAVAAQSILERDRERQAAEANRSREEREQAAKQEAARQAEDKRRRER
EAQELTSSVAVGAAGVEDGLRRIDDACGGNATEKKAAILRNVASNPEDPR
FRRIKRDNENFQRALGRFEGGIQILLSSGFRMQVEEGQTVLVMNEPDLSE
DMDGWTEWYKHITEAVERLKLELDERF*
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mRNA from alignment at L-elsbetiae_contig7214:1751..5861+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7214.16063.1 ID=mRNA_L-elsbetiae_contig7214.16063.1|Name=mRNA_L-elsbetiae_contig7214.16063.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4111bp|location=Sequence derived from alignment at L-elsbetiae_contig7214:1751..5861+ (Laminarionema elsbetiae ELsaHSoW15)
CGGCTGGAAGATGAGCTCTCCAAGAAGGTGGCGAAGTTCGAGAAGCGCTT GAGTGAAACCGACCCCGTTACGGGCGCGCCGCGATACGGAGAGAGCATGA CCGCCAAGGTGAGACGCCGGAACTTGCTGTCGCAAGCTACAATGCCCCCG TGTTAAGACTTGGCTGTGAACAGAGTATTTAGACAAATGTCTGCTGGGCG TCTGAATACTGCCTGCCTGCAGTGGGGCTAAACATCCGCGTTGCAATTAA TTTTTCCAGAGATCGTCTCTCAGTAGTGATTTTTGGATCTTCTTTTTTCC CCTCGCCTTTTGCACATTCAAGCGGCGGCAAGCCCGCAGTCCATGCATCT ATTTGTTTGCCTCCTTCAGAAGGAAACTGCGCTTTCCGCGGGCGCTTTGG TTGAGGACTGCGCACACCTCCCCCCCCGCCCGGGGTTGTAATTCCGTTCG TCCCCTTCGCACCCCTCGTTCTGACCCGCCCGCCCGACAAAGGTGGTTGC CCTCGGCGCCAAGCACCAAACGTTGCTCCAGCGGCTGGGACAAATTGAAG CTGAAGTTACGGCCGCGGTTTCCCTGCACGAATCGCGCGAAGCCGTCAGT GCGGAGGAGGCCCAGAAGGTTGGTGTTTCGTCCATGATTTTTACTTTGTC GCATATGTACATCGATACCCTCTCCGTCCACCTGCGAGGCCCCGACGCTC GTAGCAGGAAAGGCAAGAGGTAGTCGCATTGGTATGGGCGTATCGGTACA CAGAGCAAGCACAGCAGCAGCAGCAGCAGCTGGCTGTCTTGGAACGTTTA TGTGGTGTCCATCCCTCAACCTACCCGCTCTCCTCGTGTACTATCGAGTT CGAGGCAACTTGTACGGCAATATGCGTCTCCTCTCCACCCACCCGCCCCC TTTCCCCGTTGCTACATGCATAGTGTGCTCTGTCTCTATCGAGAGGGGAT TTTGCACGTCTTTTTTACTGATACAGCTCAGGTAAGAGCAACACATCAGT ATTTACTCTCTCGCGCACGAAAGCACACCGGACGCACGTGATCATGGTGG CGGGCGGCGTTTGGAGGTTGGACCGGTGTTTGACCTGTGCTTGCTTTGTA TCCGGAATGCTTTTGCACATCGGCTAAAGGCAAGGAGCGAGTAGTCTGGA CTAACCAAAAAGCTGCTGTGTTTTGCAACCTCGCGCCGTGTGTTTTTTTT CTGCCGTTGCGCTGGTTCGGCTGCACCCGCGCAGCGAGAGGTGGAAAGGC AGGAGGAGGAGGAGGCGCGAGTGAGGATACGGCTGGCAGAGGCTGAGGAG GAGCGGCGGAGAGCCGTGAGTGGGCAAAAGAGAGCGGGAGTCAAAGTACA GGTTTTCCCATCGCTGGGTTTCAGGCGTTCTTCTTCTGCCGAGTTTTGAA GGGCAATAAAGAATACACTCTCTCATTCCCTTTTGACACTCACCCTTTCG CCCCCGCCACCCCAAACCCACAACGCCACCCGTTTCTTGGCCTGCGTCGG CCTCTGCCGGCACGCATGCTCGCACGGATAAAAGGTTGCAGCGCAAAGCA TCCTCGAGCGGGATCGCGAGCGCCAAGCGGCGGAGGCGAACCGCAGCCGA GAAGAGCGCGAGCAAGCTGCAAAGCAGGAAGCGGCGCGGCAAGCAGAGGA CAAGAGAAGGTAGATACCCTTAAGTGTTTCGCGCGGATTGGCACAGGTGT GCGCGCGATCGTTGTTTGTGTATGTTTTATCGTTCCAATCTGGCTTTTTT TTAATCGCACAAGGGGGTGCGCTGTCACCGTCCCGGTGTGAACTCGCGGC ACTACTGCTGTGCCAACCTGCGAGTACTTACGGTACATCTATCTTTGATG GTGCGACTCAATCGGCATGGAGTGCTGCGCGTGCAGTGTATGGCCAGAGA ACGTGGTGTGTCGCTGTGTTTTTTACGTTTATGTATTCGAGAGGAGAGGG TTCAGTGCACTTGAACTGCTCGGTGGTTGGTTGCCCGCGTCGTACCCAAT ACAAGCGTGTTTCGAACGCTCGCGGGATACTCGTTTAGCTTGGTTTTTGT GCACCACGGGTTTTAAGAGTTGGTTGAAGAATTTTGTTCAGCTCTTTTCT TGAGTTTGTAGAGGCTACACGCGTCACCCAAGGATCTTCGGTCGCGCCTA TTTTTTGGAATTTCGCCGCAGATGTCTTGGCCAATCAGCGAATTGCGTGC CACAAAACCTTGTTTCTGCGTCTGCGAGTGCGACATTGAGCTTGATCGTC TCTTTCGGTGGGGACCTCCGCGTGCCCACCATCATAGGCGTAGTTAACCC GTTGCCTAATGCCCGCTCTCTCTTCTTTCTTTCTCTCTCTCCCCCCTCCC CTCCACTCAGGCGAGAGCGAGAAGCCCAGGAATTGACGAGCTCAGTGGCG GTGGGGGCGGCGGGCGTGGAGGACGGGTTGGTGGGTGATCGGTGTGTTAC ATGATGAGCTGTGTGGCGGGCGATGTTGTTCAGCCTGGCCTGTCTTTGAT GCCTTGTATAGGACCTTGCAACAGCTGCTGCTGCTGCTGTCGCTTCTTTG ATATCTGCGCTCATTATTACAGACTTGTTATTTGCGCGTCCCTAATCTCA CCATACTCCTTTGGCGCGCAGCGGCGCATAGACGACGCGTGCGGAGGAAA CGCCACGGAGAAAAAAGCCGCCGTCCAAGCGCTACAGCAGGCAAGCTATG CTGCTGATAATCCCTGTGATGCCTAACCCGCCCGTTACTGGTACACAGAG TGTGGACAACAATTGCCGCAGATGGGGTTGCCTGCGCCAAACGCGGTAAA CGCACACACCCTCGCATAGCAGACCTGTTTTCTAGACAATCGGGATTCGT TGAGGGCTCTCTTGTGTGGTGGTGATAAATACGATGCAAGCACGTAGTTA CACCATCTACATGGCAAGCTACGTGCGTAGCCATTTGTCTCCATCGCGAG TAGCATGTGCGGAACCCCCCGCCGCGCTTGGCGAGGACGAGGGCATTTCG CTCTGGTTTCAGCCGCGTTCACGATAAATTCGTTTCTCCTACTCCTGAAC CCCGGCAGATATTCCCTTCCTTGGTGTGTGTGTGATGCGAGTTCCCGCGC GGCGGCTGGGTGTGTGCTAATGTTTGCGTGTATGTATGTACGGCAGCGTG TATATCGCCGTTCGTGTTTGCGTTGTCTTTTATTTGGGATTATTTTGCGC AGATCTTGCGCAACGTGGCCTCGAACCCGGAGGACCCGCGATTCCGACGC ATCAAGCGAGACAACGAGAACTTCCAGCGGGCGCTGGGGCGCTTCGAAGG AGGCATTCAGATCCTCCTCTCGTCGGGTTTCAGGATGCAGGTAGGCACGC GCAATAGGCGAGAAGCGGGGGTGCCCGTACGTTGGTGGTTTTCTATTCGT CGGCGCGATTCCTGTTCGGATGTGAGACGCACAGCGAAGCCTGCGGCGCC GCCCGCCACTCACGCTGTCCCGTCGATTGGAAGGGGCTGAAAGTTTCTCG AAGATCAATCTTACCGGACGCAGATCTAACGCACGGCTCGCCGCTCTGTT TTGTCTTTTTCTCGACGCAAGAGGTGGGGGGTTGAGCACCCAAAACTGCC GAAGCACTGCGGAACAAACCGTGCTGCTGCTCGTGTCGTTTTCCCTTGTC CGTCTCTTCATAAAAACGTGCACGCGTTTCCTCACCCGCTTATTATTTCT CTCTTTTTCTCTCTAATCACCGGTCGCCCCCCCCCCCCCCCCCCCCCCCC CCGCCGCCGGGGGCGCCCCCACTTCTTTTTTGTGTTGTTTTGTCCTTTTG TATGGNNNNNNNNNNTCCTTCCTTTTTAAAAAACTCGTCCCCCTTCTCCC CCCCCTCTTTTTTTTTTCTTTTTTTTTCCTTTCCCCCCCGGCCCCCCCCC CCCCCCCCCCCCCTTGCGGGCGCGAGAACTGAACTCATGTTTTTTTCGTG TTTCTCTTACATGTTTCCGGTGACAGGTAGAAGAAGGCCAGACCGTCCTT GTGATGAACGAGCCGGATCTATCGGAAGATATGGATGGCTGGACCGAGTG GTACAAACACATCACAGAGGCGGTGGAAAGGCTCAAGCTGGAGCTTGACG AAAGATTTTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7214:1751..5861+

>mRNA_L-elsbetiae_contig7214.16063.1 ID=mRNA_L-elsbetiae_contig7214.16063.1|Name=mRNA_L-elsbetiae_contig7214.16063.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1668bp|location=Sequence derived from alignment at L-elsbetiae_contig7214:1751..5861+ (Laminarionema elsbetiae ELsaHSoW15)
CGGCTGGAAGATGAGCTCTCCAAGAAGGTGGCGAAGTTCGAGAAGCGCTT
GAGTGAAACCGACCCCGTTACGGGCGCGCCGCGATACGGAGAGAGCATGA
CCGCCAAGCGGCTGGAAGATGAGCTCTCCAAGAAGGTGGCGAAGTTCGAG
AAGCGCTTGAGTGAAACCGACCCCGTTACGGGCGCGCCGCGATACGGAGA
GAGCATGACCGCCAAGGTGGTTGCCCTCGGCGCCAAGCACCAAACGTTGC
TCCAGCGGCTGGGACAAATTGAAGCTGAAGTTACGGCCGCGGTTTCCCTG
CACGAATCGCGCGAAGCCGTCAGTGCGGAGGAGGCCCAGAAGGTGGTTGC
CCTCGGCGCCAAGCACCAAACGTTGCTCCAGCGGCTGGGACAAATTGAAG
CTGAAGTTACGGCCGCGGTTTCCCTGCACGAATCGCGCGAAGCCGTCAGT
GCGGAGGAGGCCCAGAAGCGAGAGGTGGAAAGGCAGGAGGAGGAGGAGGC
GCGAGTGAGGATACGGCTGGCAGAGGCTGAGGAGGAGCGGCGGAGAGCCC
GAGAGGTGGAAAGGCAGGAGGAGGAGGAGGCGCGAGTGAGGATACGGCTG
GCAGAGGCTGAGGAGGAGCGGCGGAGAGCCGTTGCAGCGCAAAGCATCCT
CGAGCGGGATCGCGAGCGCCAAGCGGCGGAGGCGAACCGCAGCCGAGAAG
AGCGCGAGCAAGCTGCAAAGCAGGAAGCGGCGCGGCAAGCAGAGGACAAG
AGAAGGTTGCAGCGCAAAGCATCCTCGAGCGGGATCGCGAGCGCCAAGCG
GCGGAGGCGAACCGCAGCCGAGAAGAGCGCGAGCAAGCTGCAAAGCAGGA
AGCGGCGCGGCAAGCAGAGGACAAGAGAAGGCGAGAGCGAGAAGCCCAGG
AATTGACGAGCTCAGTGGCGGTGGGGGCGGCGGGCGTGGAGGACGGGTTG
GCGAGAGCGAGAAGCCCAGGAATTGACGAGCTCAGTGGCGGTGGGGGCGG
CGGGCGTGGAGGACGGGTTGCGGCGCATAGACGACGCGTGCGGAGGAAAC
GCCACGGAGAAAAAAGCCGCCCGGCGCATAGACGACGCGTGCGGAGGAAA
CGCCACGGAGAAAAAAGCCGCCATCTTGCGCAACGTGGCCTCGAACCCGG
AGGACCCGCGATTCCGACGCATCAAGCGAGACAACGAGAACTTCCAGCGG
GCGCTGGGGCGCTTCGAAGGAGGCATTCAGATCCTCCTCTCGTCGGGTTT
CAGGATGCAGATCTTGCGCAACGTGGCCTCGAACCCGGAGGACCCGCGAT
TCCGACGCATCAAGCGAGACAACGAGAACTTCCAGCGGGCGCTGGGGCGC
TTCGAAGGAGGCATTCAGATCCTCCTCTCGTCGGGTTTCAGGATGCAGGT
AGAAGAAGGCCAGACCGTCCTTGTGATGAACGAGCCGGATCTATCGGAAG
ATATGGATGGCTGGACCGAGTGGTACAAACACATCACAGAGGCGGTGGAA
AGGCTCAAGCTGGAGCTTGACGAAAGATTTTGAGTAGAAGAAGGCCAGAC
CGTCCTTGTGATGAACGAGCCGGATCTATCGGAAGATATGGATGGCTGGA
CCGAGTGGTACAAACACATCACAGAGGCGGTGGAAAGGCTCAAGCTGGAG
CTTGACGAAAGATTTTGA
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