mRNA_L-elsbetiae_contig7102.15913.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7102.15913.1 vs. uniprot
Match: A0A6H5JYY6_9PHAE (SQHop_cyclase_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYY6_9PHAE) HSP 1 Score: 235 bits (599), Expect = 8.010e-74 Identity = 103/112 (91.96%), Postives = 107/112 (95.54%), Query Frame = 1 Query: 1 QADGGWGTHIECASTMFGTILSYVSLRLLGAPADDPACARGLAFVRENGGGSMAPSWAKFWMAVLGVYEWEGINSIPAELWLLPRWFPFHPWRMWCHSRMVYLPMSYLYSTR 336 QADGGWGTHIECASTMFGT+LSY+SLRLLG +D ACARGL FVRENGGGSMAPSWAKFWMAVLGVYEWEGINS+PAELWLLPRWFPFHPWRMWCHSRMVYLPMSYLYSTR Sbjct: 221 QADGGWGTHIECASTMFGTVLSYISLRLLGVSVEDGACARGLKFVRENGGGSMAPSWAKFWMAVLGVYEWEGINSVPAELWLLPRWFPFHPWRMWCHSRMVYLPMSYLYSTR 332
BLAST of mRNA_L-elsbetiae_contig7102.15913.1 vs. uniprot
Match: D8LFF9_ECTSI (Cycloartenol synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFF9_ECTSI) HSP 1 Score: 235 bits (599), Expect = 1.140e-72 Identity = 103/112 (91.96%), Postives = 107/112 (95.54%), Query Frame = 1 Query: 1 QADGGWGTHIECASTMFGTILSYVSLRLLGAPADDPACARGLAFVRENGGGSMAPSWAKFWMAVLGVYEWEGINSIPAELWLLPRWFPFHPWRMWCHSRMVYLPMSYLYSTR 336 QADGGWGTHIECASTMFGT+LSY+SLRLLG +D ACARGL FVRENGGGSMAPSWAKFWMAVLGVYEWEGINS+PAELWLLPRWFPFHPWRMWCHSRMVYLPMSYLYSTR Sbjct: 221 QADGGWGTHIECASTMFGTVLSYISLRLLGVSVEDGACARGLKFVRENGGGSMAPSWAKFWMAVLGVYEWEGINSVPAELWLLPRWFPFHPWRMWCHSRMVYLPMSYLYSTR 332
BLAST of mRNA_L-elsbetiae_contig7102.15913.1 vs. uniprot
Match: A0A813LWY9_POLGL (Hypothetical protein (Fragment) n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LWY9_POLGL) HSP 1 Score: 181 bits (459), Expect = 2.280e-54 Identity = 76/112 (67.86%), Postives = 89/112 (79.46%), Query Frame = 1 Query: 1 QADGGWGTHIECASTMFGTILSYVSLRLLGAPADDPACARGLAFVRENGGGSMAPSWAKFWMAVLGVYEWEGINSIPAELWLLPRWFPFHPWRMWCHSRMVYLPMSYLYSTR 336 Q DGGWGTH+E STMFG++L+YV+LRL+GA D PAC G F+RE+GG APSWAKFW+AVLGVYEWEGI +P E+WLLP WFP HP R WCH RMVYLPM +LY+ R Sbjct: 209 QEDGGWGTHVESPSTMFGSVLNYVTLRLVGAAVDSPACIEGRKFMREHGGALYAPSWAKFWLAVLGVYEWEGIAPVPPEMWLLPHWFPLHPGRFWCHCRMVYLPMCWLYARR 320
BLAST of mRNA_L-elsbetiae_contig7102.15913.1 vs. uniprot
Match: A0A6T5V9R7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A6T5V9R7_9STRA) HSP 1 Score: 178 bits (451), Expect = 7.880e-53 Identity = 74/112 (66.07%), Postives = 91/112 (81.25%), Query Frame = 1 Query: 1 QADGGWGTHIECASTMFGTILSYVSLRLLGAPADDPACARGLAFVRENGGGSMAPSWAKFWMAVLGVYEWEGINSIPAELWLLPRWFPFHPWRMWCHSRMVYLPMSYLYSTR 336 Q DGGWGTHIECASTMFGTILSY+SLRLLG +++ G F+ ++GG APSWAKFW+A +GVY+W+GINS+P E+WLLP+WFPFHP ++WCH RMVYLPM Y+Y R Sbjct: 191 QEDGGWGTHIECASTMFGTILSYISLRLLGISSNEDFMKLGRKFLLDHGGARYAPSWAKFWLASIGVYDWKGINSVPVEMWLLPQWFPFHPSKLWCHCRMVYLPMGYVYCKR 302
BLAST of mRNA_L-elsbetiae_contig7102.15913.1 vs. uniprot
Match: A0A482SSA2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SSA2_9ARCH) HSP 1 Score: 184 bits (467), Expect = 2.030e-52 Identity = 77/112 (68.75%), Postives = 92/112 (82.14%), Query Frame = 1 Query: 1 QADGGWGTHIECASTMFGTILSYVSLRLLGAPADDPACARGLAFVRENGGGSMAPSWAKFWMAVLGVYEWEGINSIPAELWLLPRWFPFHPWRMWCHSRMVYLPMSYLYSTR 336 Q DGGWGTHIECASTMFGT+L+YV+LRLLG AD+ +G F+ + GG APSWAKFW+AV+GVY+W+GINSIP E+WLLPRWFPFHP ++WCH RMVYLPM Y+Y R Sbjct: 144 QLDGGWGTHIECASTMFGTVLNYVALRLLGVSADEEYMKKGREFILKWGGALFAPSWAKFWLAVIGVYDWDGINSIPVEMWLLPRWFPFHPGKLWCHCRMVYLPMGYVYCKR 255
BLAST of mRNA_L-elsbetiae_contig7102.15913.1 vs. uniprot
Match: A0A6U4XWX2_HEMAN (Terpene cyclase/mutase family member n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4XWX2_HEMAN) HSP 1 Score: 185 bits (470), Expect = 2.310e-52 Identity = 77/112 (68.75%), Postives = 91/112 (81.25%), Query Frame = 1 Query: 1 QADGGWGTHIECASTMFGTILSYVSLRLLGAPADDPACARGLAFVRENGGGSMAPSWAKFWMAVLGVYEWEGINSIPAELWLLPRWFPFHPWRMWCHSRMVYLPMSYLYSTR 336 QADGGWGTHIE +STMFGT+LSYVSLRLLG P+ D C F+R GG PSWAKFW+++LGV+EWEG+NSIP+E+WLLP WFPFHP ++WCH RMVYLPM YLY +R Sbjct: 260 QADGGWGTHIEASSTMFGTVLSYVSLRLLGVPSGDTQCIHAREFIRSKGGAVTCPSWAKFWLSLLGVHEWEGVNSIPSEMWLLPLWFPFHPGKLWCHCRMVYLPMCYLYCSR 371
BLAST of mRNA_L-elsbetiae_contig7102.15913.1 vs. uniprot
Match: A0A482R400_9EURY (SQHop_cyclase_N domain-containing protein (Fragment) n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A482R400_9EURY) HSP 1 Score: 172 bits (436), Expect = 2.840e-52 Identity = 73/112 (65.18%), Postives = 86/112 (76.79%), Query Frame = 1 Query: 1 QADGGWGTHIECASTMFGTILSYVSLRLLGAPADDPACARGLAFVRENGGGSMAPSWAKFWMAVLGVYEWEGINSIPAELWLLPRWFPFHPWRMWCHSRMVYLPMSYLYSTR 336 Q DGGWG HIE ST+FGTI++YVS+RLLG A+D A R F+ E+GG + P W KFWMA LGV+EWEG+N IP ELWLLP WFP+HP +MWCH RMVYLPMSY+Y R Sbjct: 35 QKDGGWGLHIEGPSTIFGTIMNYVSMRLLGVSAEDAALVRAREFIHEHGGATHLPHWGKFWMATLGVFEWEGVNPIPPELWLLPYWFPYHPAKMWCHCRMVYLPMSYVYGGR 146
BLAST of mRNA_L-elsbetiae_contig7102.15913.1 vs. uniprot
Match: A0A835ZEP3_9STRA (Terpene cyclase/mutase family member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEP3_9STRA) HSP 1 Score: 185 bits (469), Expect = 3.400e-52 Identity = 80/112 (71.43%), Postives = 89/112 (79.46%), Query Frame = 1 Query: 1 QADGGWGTHIECASTMFGTILSYVSLRLLGAPADDPACARGLAFVRENGGGSMAPSWAKFWMAVLGVYEWEGINSIPAELWLLPRWFPFHPWRMWCHSRMVYLPMSYLYSTR 336 Q DGGWGTH+ECASTMFGT L+YV+LRLLGA D CA AF+ GG M SWAKFW+A+LGVY W+GINS+PAE+WLLPRW PFHP RMWCHSRMVYLPM YLY R Sbjct: 262 QRDGGWGTHVECASTMFGTALNYVALRLLGAAPDAAPCAAARAFLHARGGALMTTSWAKFWLALLGVYGWDGINSVPAEMWLLPRWLPFHPGRMWCHSRMVYLPMCYLYCRR 373
BLAST of mRNA_L-elsbetiae_contig7102.15913.1 vs. uniprot
Match: A0A7S0VGU1_9CRYP (Terpene cyclase/mutase family member (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VGU1_9CRYP) HSP 1 Score: 182 bits (463), Expect = 5.920e-52 Identity = 77/112 (68.75%), Postives = 90/112 (80.36%), Query Frame = 1 Query: 1 QADGGWGTHIECASTMFGTILSYVSLRLLGAPADDPACARGLAFVRENGGGSMAPSWAKFWMAVLGVYEWEGINSIPAELWLLPRWFPFHPWRMWCHSRMVYLPMSYLYSTR 336 QADGGWGTHIE ASTMFGT+LSYVSLRLLG + D C F+R GG PSWAKFW+++LGV+EW+G+NSIPAE+WLLP WFPFHP ++WCH RMVYLPM YLY +R Sbjct: 254 QADGGWGTHIEAASTMFGTVLSYVSLRLLGVSSADTQCMHAREFIRAQGGAVSCPSWAKFWLSLLGVHEWQGVNSIPAEMWLLPLWFPFHPGKLWCHCRMVYLPMCYLYCSR 365
BLAST of mRNA_L-elsbetiae_contig7102.15913.1 vs. uniprot
Match: A0A7S1CYZ6_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CYZ6_CYCTE) HSP 1 Score: 166 bits (421), Expect = 1.700e-51 Identity = 70/104 (67.31%), Postives = 81/104 (77.88%), Query Frame = 1 Query: 7 DGGWGTHIECASTMFGTILSYVSLRLLGAPADDPACARGLAFVRENGGGSMAPSWAKFWMAVLGVYEWEGINSIPAELWLLPRWFPFHPWRMWCHSRMVYLPMS 318 DGGWGTHIE STMFGT+L YV+LRLLG DDP C +G AF+R+NGG M SWAKF + +LG EW+G NS+P E+WLLP WFPFHP R+WCH RMVYLPM Sbjct: 1 DGGWGTHIESPSTMFGTVLMYVALRLLGKDMDDPICVKGRAFIRDNGGAIMTSSWAKFSLCLLGCMEWDGHNSVPPEMWLLPNWFPFHPGRLWCHCRMVYLPMG 104 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7102.15913.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7102.15913.1 >prot_L-elsbetiae_contig7102.15913.1 ID=prot_L-elsbetiae_contig7102.15913.1|Name=mRNA_L-elsbetiae_contig7102.15913.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=113bp QADGGWGTHIECASTMFGTILSYVSLRLLGAPADDPACARGLAFVRENGGback to top mRNA from alignment at L-elsbetiae_contig7102:636..1742+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7102.15913.1 ID=mRNA_L-elsbetiae_contig7102.15913.1|Name=mRNA_L-elsbetiae_contig7102.15913.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1107bp|location=Sequence derived from alignment at L-elsbetiae_contig7102:636..1742+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7102:636..1742+ >mRNA_L-elsbetiae_contig7102.15913.1 ID=mRNA_L-elsbetiae_contig7102.15913.1|Name=mRNA_L-elsbetiae_contig7102.15913.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=678bp|location=Sequence derived from alignment at L-elsbetiae_contig7102:636..1742+ (Laminarionema elsbetiae ELsaHSoW15)back to top |