mRNA_L-elsbetiae_contig7082.15888.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7082.15888.1 vs. uniprot
Match: A0A6H5KGX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGX1_9PHAE) HSP 1 Score: 224 bits (570), Expect = 7.570e-72 Identity = 105/115 (91.30%), Postives = 110/115 (95.65%), Query Frame = 1 Query: 1 VAVRVRFDEDKDFEPPQGSLEIIEDNPYFTQQAGKARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNEEITLKGGGTIAAGRLYVKVDHRRDDELGPTLKSGTVGVKLVER 345 VAVRVRFDE++DFEPPQGSLE+IEDNPYFTQQAGKARWTLSEAEDTRGAGLWVWGLFK+PLYPFLLLQVNN EI LKGG IA GRLYVKVDHRRDDELGPTLKSGTVGVK+VER Sbjct: 127 VAVRVRFDEERDFEPPQGSLEVIEDNPYFTQQAGKARWTLSEAEDTRGAGLWVWGLFKEPLYPFLLLQVNNLEIPLKGGAKIAPGRLYVKVDHRRDDELGPTLKSGTVGVKIVER 241
BLAST of mRNA_L-elsbetiae_contig7082.15888.1 vs. uniprot
Match: A0A836CDS7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDS7_9STRA) HSP 1 Score: 112 bits (281), Expect = 3.540e-28 Identity = 58/120 (48.33%), Postives = 74/120 (61.67%), Query Frame = 1 Query: 1 VAVRVRFDEDKDFEPPQGSLEIIEDNPYFTQQAGK-ARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNEEITLKGGGT------IAAGRLYVKVDHRRDDELGPTLKSGTVGVKLV 339 +AV VRF E+ FEPPQG +E++E+N Y G ARWTLSE D R LW+WGLF+ +PFLL Q+ +EI L G G I AG+LY KV H+ + E G L++G VGVK Sbjct: 122 IAVVVRFVEEPGFEPPQGRVEVLEENRYVRADQGPFARWTLSEDPDDRKDSLWIWGLFRQLPFPFLLFQLEIDEIPLGGTGADGVARVIPAGKLYAKVPHKFEKETGSQLRAGDVGVKYT 241
BLAST of mRNA_L-elsbetiae_contig7082.15888.1 vs. uniprot
Match: C1EGI5_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EGI5_MICCC) HSP 1 Score: 105 bits (263), Expect = 5.350e-26 Identity = 50/115 (43.48%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 1 VAVRVRFDEDKDFEPPQGSLEIIEDNPYFTQQAGKARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNEEITL-KGGGTIAAGRLYVKVDHRRDDELGPTLKSGTVGVKLVE 342 + VR RF D+ +EPPQGS+EI +D QAG RWTL+E + R AGLW+WGLF++PLYP++LL + I + +GG I G+L+ +V H R + G L G + K+ + Sbjct: 80 ITVRARFVVDEGYEPPQGSIEIEDDQELAFVQAGFHRWTLAEDPNERKAGLWIWGLFEEPLYPYMLLSFDCNRIEVAEGGYHIPKGKLFAEVKHARGSKSGHVLSDGKLSFKVTK 194
BLAST of mRNA_L-elsbetiae_contig7082.15888.1 vs. uniprot
Match: A0A7S4SSA2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SSA2_9STRA) HSP 1 Score: 103 bits (258), Expect = 2.600e-25 Identity = 53/119 (44.54%), Postives = 76/119 (63.87%), Query Frame = 1 Query: 4 AVRVRFDEDKDFEPPQGSLEIIEDNPYFTQQAG----KARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNEEITLKGG--GTIAAGRLYVKVDHRRDDELGPTLKSGTVGVKLVE 342 +V F E++ +EPPQG ++ I + + G K+RW LSE + R GLWVWGLFK+PLYPF+LLQ+ +EEI L G TI +LY +++H RD+ELG LK+ + V+ +E Sbjct: 73 SVNAHFIEEEGYEPPQGFIKQIVSDESEENKGGLKITKSRWILSEDPNERKDGLWVWGLFKEPLYPFMLLQLESEEIELPGEEKDTIQPLKLYAQINHSRDEELGVVLKTTILNVRELE 191
BLAST of mRNA_L-elsbetiae_contig7082.15888.1 vs. uniprot
Match: A0A7S0I175_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I175_9EUKA) HSP 1 Score: 103 bits (257), Expect = 4.120e-25 Identity = 54/117 (46.15%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 1 VAVRVRFDEDKDFEPPQGSLEIIEDNPYFTQQAG--KARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVN-NEEITLKGGGTIAAGRLYVKVDHRRDDELGPTLKSGTVGVKLVE 342 + V +RF +++ FEPPQG + + P T + G K RWTLSE D + LW+WGLF PLYPFLLL V E + L GG TI AG+L+++ +HRRD + L +GTV K+ E Sbjct: 78 LIVTLRFMQEQGFEPPQGLMLVESCLPEGTVELGEQKDRWTLSEDPDDQKDSLWIWGLFSQPLYPFLLLAVTLTEPVELPGGETIPAGKLFLQGEHRRDPDADTLLGAGTVVFKVSE 194
BLAST of mRNA_L-elsbetiae_contig7082.15888.1 vs. uniprot
Match: A0A7S4C309_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C309_CHRCT) HSP 1 Score: 103 bits (256), Expect = 1.210e-24 Identity = 51/117 (43.59%), Postives = 67/117 (57.26%), Query Frame = 1 Query: 1 VAVRVRFDEDKDFEPPQGSLEIIEDNPYFTQQAGK--ARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNEEITLKGGGTIAAGRLYVKVDHRRDDELGPTLKSGTVGVKLVER 345 V VRF D+ +EPPQG + + P + G+ RW LSE D R LW+WGLFK+PLYPF+L Q+ EI L G I AGRLY++ DHRR G L G V ++ ++ Sbjct: 114 VTATVRFALDEGYEPPQGLIRVESCLPEGALKLGEMPTRWMLSEDPDDRKDSLWIWGLFKEPLYPFILFQLECSEIALPTGVAIPAGRLYIQADHRRSPTEGVRLGDGKVSYRVAQQ 230
BLAST of mRNA_L-elsbetiae_contig7082.15888.1 vs. uniprot
Match: A0A7S0NTZ1_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NTZ1_9EUKA) HSP 1 Score: 98.2 bits (243), Expect = 1.310e-23 Identity = 49/116 (42.24%), Postives = 64/116 (55.17%), Query Frame = 1 Query: 1 VAVRVRFDEDKDFEPPQGSLEIIEDNPYFTQQAGKA--RWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNEEITLKGGGTIAAGRLYVKVDHRRDDELGPTLKSGTVGVKLVE 342 V VRF E+ +EPPQG + + P Q G+ RW LSE + R LW+WGLFK+PLYPF+L QV + L GG I G LYV+ +HRR G L G V ++ + Sbjct: 23 VTAAVRFAEEAGYEPPQGRIRVESSLPEGALQLGEVSTRWMLSEDPEDRKDSLWIWGLFKEPLYPFILFQVPCLGLELPNGGRIPPGLLYVQAEHRRHPTEGVRLGDGKVSYRVAQ 138
BLAST of mRNA_L-elsbetiae_contig7082.15888.1 vs. uniprot
Match: A0A7R9TJF9_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TJF9_MICPS) HSP 1 Score: 95.9 bits (237), Expect = 2.170e-22 Identity = 44/115 (38.26%), Postives = 69/115 (60.00%), Query Frame = 1 Query: 1 VAVRVRFDEDKDFEPPQGSLEIIEDNPYFTQQAGKARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNEEITLKGGGT-IAAGRLYVKVDHRRDDELGPTLKSGTVGVKLVE 342 V R F D+ +EPPQG ++I+ED+ G RWTL E + R AGLW+WGLF++PLYP++LL + + ++ GG + AG+L+ ++ H R + G L G + K+ + Sbjct: 52 VDARCVFVVDEGYEPPQGVVQIVEDDDGVFVDGGLHRWTLEEDPNERKAGLWIWGLFEEPLYPYMLLSFDVNRVEVREGGYHVPAGKLFGEMRHARGSKSGHVLSDGRLSFKVTK 166
BLAST of mRNA_L-elsbetiae_contig7082.15888.1 vs. uniprot
Match: A0A7S2IJE4_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IJE4_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 4.990e-22 Identity = 49/103 (47.57%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 40 EPPQGSLEIIEDNPYFTQQAGKARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNEEITLKG--GGTIAAGRLYVKVDHRRDDELGPTLKSGTVGVKLVE 342 E G+L+II K+RW LSE D R GLWVWGLFK+PLYPF+LLQ+ EEI L G I +LY ++ H RD E G LKS T+ V+ +E Sbjct: 2 EESSGALKII-----------KSRWILSEDPDDRKDGLWVWGLFKEPLYPFMLLQLETEEIKLPGEENDMIKPLKLYAQISHSRDQEKGVELKSATLNVRELE 93
BLAST of mRNA_L-elsbetiae_contig7082.15888.1 vs. uniprot
Match: A0A7S4JLM2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JLM2_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.770e-21 Identity = 49/120 (40.83%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 7 VRVRFDEDKDFEPPQGSLEIIEDNPYFTQQAGK------ARWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNEEITLKG--GGTIAAGRLYVKVDHRRDDELGPTLKSGTVGVKLVE 342 V +F E+ +EPPQG + I + AGK + W LSE D R GLWVWGLFK+PLYPF+LLQ+ +E+ L G G +I +LY +++H R+ E G L++ + V+ +E Sbjct: 77 VEAQFVEEVGYEPPQGIVRQILSENEDEEGAGKMLEISNSYWKLSEDPDDRKDGLWVWGLFKEPLYPFMLLQLETKEVALPGEEGDSIKPLKLYAQINHSREKEEGVVLQASALSVRELE 196 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7082.15888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7082.15888.1 >prot_L-elsbetiae_contig7082.15888.1 ID=prot_L-elsbetiae_contig7082.15888.1|Name=mRNA_L-elsbetiae_contig7082.15888.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=116bp VAVRVRFDEDKDFEPPQGSLEIIEDNPYFTQQAGKARWTLSEAEDTRGAGback to top mRNA from alignment at L-elsbetiae_contig7082:7813..9542- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7082.15888.1 ID=mRNA_L-elsbetiae_contig7082.15888.1|Name=mRNA_L-elsbetiae_contig7082.15888.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1730bp|location=Sequence derived from alignment at L-elsbetiae_contig7082:7813..9542- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7082:7813..9542- >mRNA_L-elsbetiae_contig7082.15888.1 ID=mRNA_L-elsbetiae_contig7082.15888.1|Name=mRNA_L-elsbetiae_contig7082.15888.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=696bp|location=Sequence derived from alignment at L-elsbetiae_contig7082:7813..9542- (Laminarionema elsbetiae ELsaHSoW15)back to top |