mRNA_L-elsbetiae_contig7030.15833.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: A0A6H5KEB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB2_9PHAE) HSP 1 Score: 311 bits (796), Expect = 7.980e-103 Identity = 172/215 (80.00%), Postives = 179/215 (83.26%), Query Frame = 3 Query: 48 MSGGNVAVTMVLALLMMSATIVSSFVYSST-----RWSSDWNKRCNRSTGGRSSYRGTRICRQELTCGLQITVRIRGKKSREEDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 677 M GGNV V V ALL S T VSS V+S + R SS W +R S G Y T ++ELTCGLQITVRIRGKKSREEDYTNQAYDEY KRLRPVLALDTQWHKTD+DLEAAVRKD GVVVCLDEGGRQM+SPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLK KPP GGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE Sbjct: 1 MLGGNVVVV-VSALLATSTTFVSSLVHSRSTTQLSRESSAWRRR---SPSGTRRYSETGR-KRELTCGLQITVRIRGKKSREEDYTNQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 210
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: D7FIP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIP1_ECTSI) HSP 1 Score: 247 bits (631), Expect = 3.630e-78 Identity = 121/130 (93.08%), Postives = 125/130 (96.15%), Query Frame = 3 Query: 288 TNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 677 + QAYDEY KRLRPVLALDTQWHKTD+DLEAAVRKD GVVVCLDEGGRQM+SPAFSDF+FSKLEEGGSRLTFVVGGAEGLPPGLK KPP GGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE Sbjct: 60 SKQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 189
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: W7TG35_9STRA (Ribosomal rna large subunit methyltransferase h n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG35_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.130e-54 Identity = 93/158 (58.86%), Postives = 115/158 (72.78%), Query Frame = 3 Query: 204 TRICRQELTCGLQITVRIRGKKSREEDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 677 T R CGLQ+T+ IRGK+S E++ N AY EY KRLRPVL L T WHKTD +LEAA+ K+ V+CLDEGG+Q+ S +D ++ +LEEGG+RL+ V+GGAEGLPP L++ SLS +TFTH WAR LLAEQIYRASEI+RGS YHKE Sbjct: 60 THAFRVTPACGLQVTIHIRGKRSGGEEFLNDAYLEYTKRLRPVLGLTTVWHKTDSELEAAIAKEKAPVICLDEGGKQLSSMELADILYKRLEEGGARLSLVIGGAEGLPPRLRASKELW----SLSRLTFTHQWARVLLAEQIYRASEIKRGSGYHKE 213
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: A0A835ZC53_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC53_9STRA) HSP 1 Score: 174 bits (441), Expect = 7.460e-50 Identity = 85/149 (57.05%), Postives = 113/149 (75.84%), Query Frame = 3 Query: 228 TCGLQITVRIRGKKSREEDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 674 TCG ++T+ IRGK+ E + +DEYVKRLRP L L T WHKTD D+EAAV ++ V+C+DE G+Q+DS +FS++++ KLE GGSRL FV+GGAEGLP +K++ + K+SLS M TH WA ALL+EQIYRA+EIR+G+KYHK Sbjct: 27 TCGPRVTIHIRGKE--ERGFLADGHDEYVKRLRPTLQLTTVWHKTDSDMEAAVFREQCPVICMDERGKQLDSTSFSEYLYKKLEIGGSRLAFVIGGAEGLPASMKAE--KSYDKMSLSKMVLTHTWAWALLSEQIYRATEIRKGTKYHK 171
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: A0A7S2UUR8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUR8_9STRA) HSP 1 Score: 166 bits (419), Expect = 2.550e-46 Identity = 83/150 (55.33%), Postives = 108/150 (72.00%), Query Frame = 3 Query: 225 LTCGLQITVRIRGKKSREEDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 674 +TCGL++T+ IRGKKS ED+ + DEY KRLR L L T+W+K D L V+K+ GV+V LDE G+ ++S FS ++ LE+GGSRL FV+GGAEGLPP LK++ +SLS MTFTH AR +LAEQIYRA+EIR+G+ YHK Sbjct: 45 MTCGLEVTIHIRGKKSGGEDWISTGIDEYQKRLRSTLKLQTKWYKDDSALIQGVKKEKGVIVTLDERGKLLNSKEFSQMMYKMLEDGGSRLHFVIGGAEGLPPSLKTEAKH---LISLSKMTFTHQQARLILAEQIYRATEIRKGTGYHK 191
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: A0A7S2R9V3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9V3_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.740e-38 Identity = 77/133 (57.89%), Postives = 91/133 (68.42%), Query Frame = 3 Query: 279 EDYTNQAYDEYVKRLRPV-LALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 674 + + Y EY KRL+P + L T WH+TD+ L AAV V+CLD G Q S FSD +FSKLE+GGSRL FV+GGAEGLPP LK R G +SLS +TFTH AR LLAEQ+YRA+EIRRGS YHK Sbjct: 5 DQWIEDGYAEYEKRLKPQQVELVTVWHRTDQQLLAAVEGSKAPVICLDPTGAQWSSERFSDMLFSKLEDGGSRLMFVIGGAEGLPPELK----RSGNLMSLSKLTFTHQMARMLLAEQVYRAAEIRRGSGYHK 133
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: A0A7S2XIV0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIV0_9STRA) HSP 1 Score: 135 bits (339), Expect = 3.000e-34 Identity = 76/165 (46.06%), Postives = 105/165 (63.64%), Query Frame = 3 Query: 201 GTRICRQELTCGLQITVRIRGKKSREEDYTNQAYDEYVKRLRPV-LALDTQWHKTDEDLEAAVRKDTG---VVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKS---KPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 674 G R R L G+++ +RI G+K+ E + AY Y RLRP + ++T WHK D++L V+ D+ VV LD G+ S FS+ +++ L++GGSRL+FV+GGAEGLP L+ P + SLS++TFTH +AR LL EQIYRASEIR+GS YHK Sbjct: 47 GVRRSRSSLCMGMEVRIRIVGRKNGSEKWLEDAYSMYETRLRPSNIDVETIWHKNDQELIKGVKGDSDKGHTVVLLDPRGKPRTSEQFSENMYTWLDQGGSRLSFVIGGAEGLPYELRDGSYNPKKSLILFSLSALTFTHQFARTLLMEQIYRASEIRKGSGYHK 211
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: A0A7S2F628_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F628_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.260e-33 Identity = 76/167 (45.51%), Postives = 108/167 (64.67%), Query Frame = 3 Query: 189 SSYRGTRICRQELTCGLQITVRIRGKKSREEDYTNQAYDEYVKRLRPV-LALDTQWHKTDEDLEAAVRKDTGV-VVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSK--PPRGGAK-LSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 674 SS R RQ +T LQ+T+ I+G+K D+ A+++Y RL P + L T WHK+++ L A++ + +CLD G+Q+DS F ++ +L EGGSRL FV+GGAEGLP ++ K P + +SLSSMTFTH AR +LAEQ+YRA+EIR+G+ YHK Sbjct: 38 SSDNNNRSGRQCITAALQVTLHIQGRKI--NDHNEVAFEQYAMRLTPHRIQLKTVWHKSNDQLTKAIKATSREPCICLDVCGQQLDSGGFEQLLYQRLVEGGSRLAFVIGGAEGLPDEVREKKDPKLQHVEFISLSSMTFTHQMARVILAEQVYRAAEIRKGTGYHK 202
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: A0A7W1YWG3_9BACT (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1YWG3_9BACT) HSP 1 Score: 127 bits (319), Expect = 3.230e-32 Identity = 70/144 (48.61%), Postives = 90/144 (62.50%), Query Frame = 3 Query: 243 ITVRIRGKKSREEDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 674 I ++I +E++ A +EYVKRL P+ L QW K D+ L K+ +++CLD G + S FS F+ KL+ GGSRLTF++GGA+GLP LKS P LSLS MTFTH R +L EQIYRA EI RGS+YHK Sbjct: 2 IKIKIISVGKNKEEWLETALNEYVKRLTPIATLSFQWAKDDQHLLDIALKEP-LLICLDPQGSSLSSEEFSSFLHQKLQLGGSRLTFIIGGADGLPTTLKSSP-----LLSLSKMTFTHQITRLILVEQIYRAFEIARGSQYHK 139
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: A0A0M0K3N9_9EUKA (Ribosomal RNA large subunit methyltransferase h n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K3N9_9EUKA) HSP 1 Score: 128 bits (321), Expect = 7.600e-32 Identity = 75/152 (49.34%), Postives = 95/152 (62.50%), Query Frame = 3 Query: 225 LTCGLQITVRIRGKKSREEDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAV-RKDTGVVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 677 + CG ++T+ GK +E + A + Y RLR V+ +D W + D LEA V R D+ + LDE G Q S F+ F LE GGSR+TF +GGA+GLPP LK+ P G LSLS +TFTH AR LL EQIYRA+EIRRGS YHK+ Sbjct: 46 VRCGPRVTIYSVGKT--KEAWLQTAIELYTTRLRSVVDIDCVWVRDDAALEAQVSRADSAGCIILDERGPQCTSVEFTSRFFDALEAGGSRVTFFIGGADGLPPALKADP---GRLLSLSRLTFTHQMARLLLIEQIYRATEIRRGSGYHKD 192 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7030.15833.1 >prot_L-elsbetiae_contig7030.15833.1 ID=prot_L-elsbetiae_contig7030.15833.1|Name=mRNA_L-elsbetiae_contig7030.15833.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=214bp MMVMSGGNVAVTMVLALLMMSATIVSSFVYSSTRWSSDWNKRCNRSTGGRback to top mRNA from alignment at L-elsbetiae_contig7030:7250..9113- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7030.15833.1 ID=mRNA_L-elsbetiae_contig7030.15833.1|Name=mRNA_L-elsbetiae_contig7030.15833.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1864bp|location=Sequence derived from alignment at L-elsbetiae_contig7030:7250..9113- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7030:7250..9113- >mRNA_L-elsbetiae_contig7030.15833.1 ID=mRNA_L-elsbetiae_contig7030.15833.1|Name=mRNA_L-elsbetiae_contig7030.15833.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1284bp|location=Sequence derived from alignment at L-elsbetiae_contig7030:7250..9113- (Laminarionema elsbetiae ELsaHSoW15)back to top |