prot_L-elsbetiae_contig7030.15833.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7030.15833.1
Unique Nameprot_L-elsbetiae_contig7030.15833.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length214
Homology
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: A0A6H5KEB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB2_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 3.420e-105
Identity = 172/215 (80.00%), Postives = 179/215 (83.26%), Query Frame = 0
Query:    4 MSGGNVAVTMVLALLMMSATIVSSFVYSST-----RWSSDWNKRCNRSTGGRSSYRGTRICRQELTCGLQITVRIRGKKSREEDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 213
            M GGNV V  V ALL  S T VSS V+S +     R SS W +R   S  G   Y  T   ++ELTCGLQITVRIRGKKSREEDYTNQAYDEY KRLRPVLALDTQWHKTD+DLEAAVRKD GVVVCLDEGGRQM+SPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLK KPP GGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE
Sbjct:    1 MLGGNVVVV-VSALLATSTTFVSSLVHSRSTTQLSRESSAWRRR---SPSGTRRYSETGR-KRELTCGLQITVRIRGKKSREEDYTNQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 210          
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: D7FIP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIP1_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.500e-80
Identity = 121/130 (93.08%), Postives = 125/130 (96.15%), Query Frame = 0
Query:   84 TNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 213
            + QAYDEY KRLRPVLALDTQWHKTD+DLEAAVRKD GVVVCLDEGGRQM+SPAFSDF+FSKLEEGGSRLTFVVGGAEGLPPGLK KPP GGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE
Sbjct:   60 SKQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 189          
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: W7TG35_9STRA (Ribosomal rna large subunit methyltransferase h n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG35_9STRA)

HSP 1 Score: 188 bits (477), Expect = 7.580e-57
Identity = 93/158 (58.86%), Postives = 115/158 (72.78%), Query Frame = 0
Query:   56 TRICRQELTCGLQITVRIRGKKSREEDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 213
            T   R    CGLQ+T+ IRGK+S  E++ N AY EY KRLRPVL L T WHKTD +LEAA+ K+   V+CLDEGG+Q+ S   +D ++ +LEEGG+RL+ V+GGAEGLPP L++         SLS +TFTH WAR LLAEQIYRASEI+RGS YHKE
Sbjct:   60 THAFRVTPACGLQVTIHIRGKRSGGEEFLNDAYLEYTKRLRPVLGLTTVWHKTDSELEAAIAKEKAPVICLDEGGKQLSSMELADILYKRLEEGGARLSLVIGGAEGLPPRLRASKELW----SLSRLTFTHQWARVLLAEQIYRASEIKRGSGYHKE 213          
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: A0A835ZC53_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC53_9STRA)

HSP 1 Score: 174 bits (441), Expect = 5.910e-52
Identity = 85/149 (57.05%), Postives = 113/149 (75.84%), Query Frame = 0
Query:   64 TCGLQITVRIRGKKSREEDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 212
            TCG ++T+ IRGK+  E  +    +DEYVKRLRP L L T WHKTD D+EAAV ++   V+C+DE G+Q+DS +FS++++ KLE GGSRL FV+GGAEGLP  +K++  +   K+SLS M  TH WA ALL+EQIYRA+EIR+G+KYHK
Sbjct:   27 TCGPRVTIHIRGKE--ERGFLADGHDEYVKRLRPTLQLTTVWHKTDSDMEAAVFREQCPVICMDERGKQLDSTSFSEYLYKKLEIGGSRLAFVIGGAEGLPASMKAE--KSYDKMSLSKMVLTHTWAWALLSEQIYRATEIRKGTKYHK 171          
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: A0A7S2UUR8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUR8_9STRA)

HSP 1 Score: 166 bits (419), Expect = 2.260e-48
Identity = 83/150 (55.33%), Postives = 108/150 (72.00%), Query Frame = 0
Query:   63 LTCGLQITVRIRGKKSREEDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 212
            +TCGL++T+ IRGKKS  ED+ +   DEY KRLR  L L T+W+K D  L   V+K+ GV+V LDE G+ ++S  FS  ++  LE+GGSRL FV+GGAEGLPP LK++       +SLS MTFTH  AR +LAEQIYRA+EIR+G+ YHK
Sbjct:   45 MTCGLEVTIHIRGKKSGGEDWISTGIDEYQKRLRSTLKLQTKWYKDDSALIQGVKKEKGVIVTLDERGKLLNSKEFSQMMYKMLEDGGSRLHFVIGGAEGLPPSLKTEAKH---LISLSKMTFTHQQARLILAEQIYRATEIRKGTGYHK 191          
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: A0A7S2R9V3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9V3_9STRA)

HSP 1 Score: 143 bits (361), Expect = 2.220e-40
Identity = 77/133 (57.89%), Postives = 91/133 (68.42%), Query Frame = 0
Query:   81 EDYTNQAYDEYVKRLRPV-LALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 212
            + +    Y EY KRL+P  + L T WH+TD+ L AAV      V+CLD  G Q  S  FSD +FSKLE+GGSRL FV+GGAEGLPP LK    R G  +SLS +TFTH  AR LLAEQ+YRA+EIRRGS YHK
Sbjct:    5 DQWIEDGYAEYEKRLKPQQVELVTVWHRTDQQLLAAVEGSKAPVICLDPTGAQWSSERFSDMLFSKLEDGGSRLMFVIGGAEGLPPELK----RSGNLMSLSKLTFTHQMARMLLAEQVYRAAEIRRGSGYHK 133          
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: A0A7S2XIV0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIV0_9STRA)

HSP 1 Score: 135 bits (339), Expect = 4.510e-36
Identity = 76/165 (46.06%), Postives = 105/165 (63.64%), Query Frame = 0
Query:   55 GTRICRQELTCGLQITVRIRGKKSREEDYTNQAYDEYVKRLRPV-LALDTQWHKTDEDLEAAVRKDTG---VVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKS---KPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 212
            G R  R  L  G+++ +RI G+K+  E +   AY  Y  RLRP  + ++T WHK D++L   V+ D+     VV LD  G+   S  FS+ +++ L++GGSRL+FV+GGAEGLP  L+     P +     SLS++TFTH +AR LL EQIYRASEIR+GS YHK
Sbjct:   47 GVRRSRSSLCMGMEVRIRIVGRKNGSEKWLEDAYSMYETRLRPSNIDVETIWHKNDQELIKGVKGDSDKGHTVVLLDPRGKPRTSEQFSENMYTWLDQGGSRLSFVIGGAEGLPYELRDGSYNPKKSLILFSLSALTFTHQFARTLLMEQIYRASEIRKGSGYHK 211          
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: A0A7S2F628_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F628_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.970e-35
Identity = 76/167 (45.51%), Postives = 108/167 (64.67%), Query Frame = 0
Query:   51 SSYRGTRICRQELTCGLQITVRIRGKKSREEDYTNQAYDEYVKRLRPV-LALDTQWHKTDEDLEAAVRKDTGV-VVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSK--PPRGGAK-LSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 212
            SS    R  RQ +T  LQ+T+ I+G+K    D+   A+++Y  RL P  + L T WHK+++ L  A++  +    +CLD  G+Q+DS  F   ++ +L EGGSRL FV+GGAEGLP  ++ K  P     + +SLSSMTFTH  AR +LAEQ+YRA+EIR+G+ YHK
Sbjct:   38 SSDNNNRSGRQCITAALQVTLHIQGRKI--NDHNEVAFEQYAMRLTPHRIQLKTVWHKSNDQLTKAIKATSREPCICLDVCGQQLDSGGFEQLLYQRLVEGGSRLAFVIGGAEGLPDEVREKKDPKLQHVEFISLSSMTFTHQMARVILAEQVYRAAEIRKGTGYHK 202          
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: A0A7W1YWG3_9BACT (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1YWG3_9BACT)

HSP 1 Score: 127 bits (319), Expect = 5.760e-34
Identity = 70/144 (48.61%), Postives = 90/144 (62.50%), Query Frame = 0
Query:   69 ITVRIRGKKSREEDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 212
            I ++I      +E++   A +EYVKRL P+  L  QW K D+ L     K+  +++CLD  G  + S  FS F+  KL+ GGSRLTF++GGA+GLP  LKS P      LSLS MTFTH   R +L EQIYRA EI RGS+YHK
Sbjct:    2 IKIKIISVGKNKEEWLETALNEYVKRLTPIATLSFQWAKDDQHLLDIALKEP-LLICLDPQGSSLSSEEFSSFLHQKLQLGGSRLTFIIGGADGLPTTLKSSP-----LLSLSKMTFTHQITRLILVEQIYRAFEIARGSQYHK 139          
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Match: A0A0M0K3N9_9EUKA (Ribosomal RNA large subunit methyltransferase h n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K3N9_9EUKA)

HSP 1 Score: 128 bits (321), Expect = 1.330e-33
Identity = 75/152 (49.34%), Postives = 95/152 (62.50%), Query Frame = 0
Query:   63 LTCGLQITVRIRGKKSREEDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAV-RKDTGVVVCLDEGGRQMDSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPRGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 213
            + CG ++T+   GK   +E +   A + Y  RLR V+ +D  W + D  LEA V R D+   + LDE G Q  S  F+   F  LE GGSR+TF +GGA+GLPP LK+ P   G  LSLS +TFTH  AR LL EQIYRA+EIRRGS YHK+
Sbjct:   46 VRCGPRVTIYSVGKT--KEAWLQTAIELYTTRLRSVVDIDCVWVRDDAALEAQVSRADSAGCIILDERGPQCTSVEFTSRFFDALEAGGSRVTFFIGGADGLPPALKADP---GRLLSLSRLTFTHQMARLLLIEQIYRATEIRRGSGYHKD 192          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7030.15833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEB2_9PHAE3.420e-10580.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIP1_ECTSI1.500e-8093.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TG35_9STRA7.580e-5758.86Ribosomal rna large subunit methyltransferase h n=... [more]
A0A835ZC53_9STRA5.910e-5257.05Alpha/beta knot methyltransferase n=1 Tax=Tribonem... [more]
A0A7S2UUR8_9STRA2.260e-4855.33Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2R9V3_9STRA2.220e-4057.89Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2XIV0_9STRA4.510e-3646.06Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2F628_9STRA1.970e-3545.51Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7W1YWG3_9BACT5.760e-3448.61Ribosomal RNA large subunit methyltransferase H n=... [more]
A0A0M0K3N9_9EUKA1.330e-3349.34Ribosomal RNA large subunit methyltransferase h n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003742RNA methyltransferase RlmHPFAMPF02590SPOUT_MTasecoord: 69..211
e-value: 1.5E-29
score: 103.0
IPR003742RNA methyltransferase RlmHPANTHERPTHR33603FAMILY NOT NAMEDcoord: 37..212
IPR003742RNA methyltransferase RlmHHAMAPMF_0065823SrRNA_methyltr_Hcoord: 67..212
score: 20.929
IPR029026tRNA (guanine-N1-)-methyltransferase, N-terminalGENE3D3.40.1280.10coord: 68..213
e-value: 9.3E-35
score: 121.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..213
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..27
score: 0.619
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILY75217alpha/beta knotcoord: 73..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7030contigL-elsbetiae_contig7030:7686..9075 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7030.15833.1mRNA_L-elsbetiae_contig7030.15833.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7030 7250..9113 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7030.15833.1 ID=prot_L-elsbetiae_contig7030.15833.1|Name=mRNA_L-elsbetiae_contig7030.15833.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=214bp
MMVMSGGNVAVTMVLALLMMSATIVSSFVYSSTRWSSDWNKRCNRSTGGR
SSYRGTRICRQELTCGLQITVRIRGKKSREEDYTNQAYDEYVKRLRPVLA
LDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMDSPAFSDFVFSKLEEGG
SRLTFVVGGAEGLPPGLKSKPPRGGAKLSLSSMTFTHLWARALLAEQIYR
ASEIRRGSKYHKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003742RlmH-like
IPR029026tRNA_m1G_MTases_N
IPR029028Alpha/beta_knot_MTases