mRNA_L-elsbetiae_contig69.15665.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig69.15665.1 vs. uniprot
Match: D7G0S2_ECTSI (Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S2_ECTSI) HSP 1 Score: 132 bits (333), Expect = 2.430e-37 Identity = 69/123 (56.10%), Postives = 80/123 (65.04%), Query Frame = 1 Query: 1 MADPSELRLAYNQKKIVRDVIDGSADVGFVRTDMVERMDAEGEANLSDVSFLFVREDIAASGFPFPSATDLVPEWPLQVLPHVPADLSKEVVRALLRLNQTHEAAVAGAYSTWDAPLSYSSLR 369 MAD E+R YNQ+KIV DVI+G+ DVGFVRTDMV+ MDA DLVPEWPLQ PHVP+DL KEVVRAL+ +N+THEAAV+G YSTWD PLSY+ LR Sbjct: 1 MADTEEVRFTYNQEKIVYDVINGNIDVGFVRTDMVQLMDA----------------------------ADLVPEWPLQAFPHVPSDLVKEVVRALMLINETHEAAVSGGYSTWDVPLSYADLR 95
BLAST of mRNA_L-elsbetiae_contig69.15665.1 vs. uniprot
Match: D7G0Y8_ECTSI (Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y8_ECTSI) HSP 1 Score: 134 bits (338), Expect = 6.980e-37 Identity = 72/123 (58.54%), Postives = 81/123 (65.85%), Query Frame = 1 Query: 1 MADPSELRLAYNQKKIVRDVIDGSADVGFVRTDMVERMDAEGEANLSDVSFLFVREDIAASGFPFPSATDLVPEWPLQVLPHVPADLSKEVVRALLRLNQTHEAAVAGAYSTWDAPLSYSSLR 369 MAD E+R AYNQKKIV DVI+ + DVGFVRTDMVERMDA DLVPEWPLQ L HVP+DL+KEVV ALL +N+THEAAV+G YSTWD PLSY+ LR Sbjct: 152 MADTEEVRFAYNQKKIVYDVINENVDVGFVRTDMVERMDA----------------------------ADLVPEWPLQALSHVPSDLAKEVVGALLLINETHEAAVSGGYSTWDVPLSYADLR 246
BLAST of mRNA_L-elsbetiae_contig69.15665.1 vs. uniprot
Match: A0A7S3YSR5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YSR5_9EUKA) HSP 1 Score: 116 bits (291), Expect = 7.860e-28 Identity = 63/127 (49.61%), Postives = 81/127 (63.78%), Query Frame = 1 Query: 1 MADPSELRLAYNQKKIVRDVIDGSADVGFVRTDMVERMDAEGEANLSDVSFLFVREDIAASGFPFPS--ATDLVPEWPLQVLPHVPADLS--KEVVRALLRLNQTHEAAVAGAYSTWDAPLSYSSLR 369 M DP+++R A+NQKKIV DV G DVGFVRTDM+E MDA GE +LS + +++I G PFP +T L PEW L LPH+ +D +EV+ AL+R N + + A YSTW PLSY LR Sbjct: 191 MVDPAQVRFAFNQKKIVHDVRRGDVDVGFVRTDMIEGMDANGETSLSYFKVIH-KQNITYEGSPFPFQISTRLYPEWSLGALPHMNSDYKVVEEVINALMRTNSSSNCSKAAGYSTWQHPLSYMPLR 316
BLAST of mRNA_L-elsbetiae_contig69.15665.1 vs. uniprot
Match: A0A7S0DIN8_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DIN8_9EUKA) HSP 1 Score: 115 bits (287), Expect = 2.740e-27 Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 1 Query: 1 MADPSELRLAYNQKKIVRDVIDGSADVGFVRTDMVERMDAEGEANLSDVSFLFVREDIAASG--FPFPSATDLVPEWPLQVLPHVPAD--LSKEVVRALLRLNQTHEAAVAGAYSTWDAPLSYSSLR 369 M P ++R A+NQKKIV DV++G+ADVGFVRTDM+E M ++GE N+S + ++++ G FPF S+T+L PEW L +LPHV D +S+ V AL+ +++ H AA G YSTW PLSY L Sbjct: 184 MTLPKQVRFAFNQKKIVLDVLNGNADVGFVRTDMIEGMASKGEVNISSFKVIH-QQNMTYEGRRFPFLSSTELYPEWSLGMLPHVGIDYMVSERVAFALMDIHKDHWAAKNGTYSTWQPPLSYMRLN 309
BLAST of mRNA_L-elsbetiae_contig69.15665.1 vs. uniprot
Match: A0A7S0MS93_9CRYP (Guanylate cyclase (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MS93_9CRYP) HSP 1 Score: 102 bits (254), Expect = 7.710e-23 Identity = 56/122 (45.90%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 1 MADPSE-LRLAYNQKKIVRDVIDGSADVGFVRTDMVERMDAEGEANLSDVSFLFVREDIAASGFPFPSATDLVPEWPLQVLPHVPADLSKEVVRALLRLNQTHEAAVAGAYSTWDAPLSYSS 363 + DP++ + + Y+Q K+V +V+ G ADVG VRT +E M A+ S LF ++ A+ +PFP T L PEWPL V DL EV AL+R+N +H AA AGAYS WD P+SYSS Sbjct: 22 LVDPAQVIFVGYDQSKVVEEVLLGRADVGLVRTGYIEGMVAQNRTRQS----LFKYINVQAAEYPFPVCTALYPEWPLAATRGVDRDLVVEVAAALMRINASHPAAFAGAYSAWDPPMSYSS 139
BLAST of mRNA_L-elsbetiae_contig69.15665.1 vs. uniprot
Match: A0A812RNW9_9DINO (TtrS protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RNW9_9DINO) HSP 1 Score: 97.1 bits (240), Expect = 6.180e-21 Identity = 54/128 (42.19%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 1 MADPSELRLAYNQKKIVRDVIDGSADVGFVRTDMVERMDAEGEANLSDVSFLFVREDIAASGFPFPSATDLVPEWPLQVLPHVPADLSKEVVRALLRLN------QTHEAAVAGAYSTWDAPLSYSSL 366 M D L A+NQ KIV+DV G ADVGFVRTD+++R A AN + + V IA + FPF +TD PEWP+ LPHV A++++ V R+L+ L+ + E A+AG +++W P++Y L Sbjct: 646 MTDVPRLVFAFNQNKIVQDVELGLADVGFVRTDLIDRNVA---ANKTKWEYFRVIGQIADTDFPFARSTDFTPEWPIGALPHVHAEVTELVARSLMSLDRFSPDPELSEPAIAGNFASWSTPMNYFGL 770
BLAST of mRNA_L-elsbetiae_contig69.15665.1 vs. uniprot
Match: A0A812P169_9DINO (TtrS protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812P169_9DINO) HSP 1 Score: 96.7 bits (239), Expect = 8.350e-21 Identity = 54/128 (42.19%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 1 MADPSELRLAYNQKKIVRDVIDGSADVGFVRTDMVERMDAEGEANLSDVSFLFVREDIAASGFPFPSATDLVPEWPLQVLPHVPADLSKEVVRALLRLN------QTHEAAVAGAYSTWDAPLSYSSL 366 M D +L A+NQ KIV+DV G ADVGFVRTD+++R A AN + + V IA S FPF +TD PEWP+ LPHV A++++ V +L+ L+ + E A+AG +++W P++Y L Sbjct: 181 MTDVPQLIFAFNQNKIVQDVELGLADVGFVRTDLIDRNVA---ANKTKWEYFRVIGQIADSDFPFARSTDFTPEWPIGALPHVHAEVTELVASSLMSLDRFSPDPELSEPAIAGNFASWSTPMNYFGL 305
BLAST of mRNA_L-elsbetiae_contig69.15665.1 vs. uniprot
Match: UPI0003B3BB6D (diguanylate cyclase n=1 Tax=Leucothrix mucor TaxID=45248 RepID=UPI0003B3BB6D) HSP 1 Score: 94.0 bits (232), Expect = 6.060e-20 Identity = 51/111 (45.95%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 37 QKKIVRDVIDGSADVGFVRTDMVERMDAEGEANLSDVSFLFVREDIAASGFPFPSATDLVPEWPLQVLPHVPADLSKEVVRALLRLNQTHEAAVAGAYSTWDAPLSYSSLR 369 Q+KIV V DG D G VRTDM+ERM A+G+ NL D L R+ +G+PF +T L PEWP P +LS V RAL+ + AAV+G Y W PLSY+S+ Sbjct: 186 QEKIVISVRDGLVDAGSVRTDMLERMAADGQINLDDFRVLGERK---TAGYPFKHSTRLYPEWPFAKFPKASNELSNSVARALMDIKPADAAAVSGKYVGWTVPLSYNSVH 293
BLAST of mRNA_L-elsbetiae_contig69.15665.1 vs. uniprot
Match: A0A317CC87_9GAMM (GGDEF domain-containing protein n=1 Tax=Leucothrix arctica TaxID=1481894 RepID=A0A317CC87_9GAMM) HSP 1 Score: 92.4 bits (228), Expect = 2.190e-19 Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 34 NQKKIVRDVIDGSADVGFVRTDMVERMDAEGEANLSDVSFLFVREDIAASGFPFPSATDLVPEWPLQVLPHVPADLSKEVVRALLRLNQTHEAAVAGAYSTWDAPLSYSSLR 369 +Q+KIV V DG D G VRTDM+ERM AEGE +L+ L R+ GFPF +T L PEWPL + P+V L+K+V L+ + AA+ G Y+ W+ L+Y S+ Sbjct: 185 DQEKIVFSVRDGLVDAGVVRTDMLERMAAEGEIDLNTFRVLGERK---TEGFPFKHSTKLYPEWPLAIFPNVTDKLAKDVASVLMDIKPEDNAAIKGKYAGWNVSLNYQSVH 293
BLAST of mRNA_L-elsbetiae_contig69.15665.1 vs. uniprot
Match: A0A813BBC4_9DINO (TtrS protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813BBC4_9DINO) HSP 1 Score: 90.1 bits (222), Expect = 1.600e-18 Identity = 51/128 (39.84%), Postives = 73/128 (57.03%), Query Frame = 1 Query: 1 MADPSELRLAYNQKKIVRDVIDGSADVGFVRTDMVERMDAEGEANLSDVSFLFVREDIAASGFPFPSATDLVPEWPLQVLPHVPADLSKEVVRALLRLN------QTHEAAVAGAYSTWDAPLSYSSL 366 M D L A+NQ KIV+DV G ADVGFVRTD+++R A NL+ + V I S FPF +T PEWP+ LPHV ++ + V +L+ L+ + E A+AG +++W P++Y L Sbjct: 141 MTDVPRLTFAFNQNKIVQDVELGLADVGFVRTDLIDRNVAN---NLTKWEYFRVIGQIPDSDFPFARSTAFTPEWPIGALPHVTDEVKELVASSLMALDRFSPDPELSEPAIAGNFASWSTPMNYFGL 265 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig69.15665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig69.15665.1 >prot_L-elsbetiae_contig69.15665.1 ID=prot_L-elsbetiae_contig69.15665.1|Name=mRNA_L-elsbetiae_contig69.15665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=124bp MADPSELRLAYNQKKIVRDVIDGSADVGFVRTDMVERMDAEGEANLSDVSback to top mRNA from alignment at L-elsbetiae_contig69:41915..43418- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig69.15665.1 ID=mRNA_L-elsbetiae_contig69.15665.1|Name=mRNA_L-elsbetiae_contig69.15665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1504bp|location=Sequence derived from alignment at L-elsbetiae_contig69:41915..43418- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig69:41915..43418- >mRNA_L-elsbetiae_contig69.15665.1 ID=mRNA_L-elsbetiae_contig69.15665.1|Name=mRNA_L-elsbetiae_contig69.15665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=744bp|location=Sequence derived from alignment at L-elsbetiae_contig69:41915..43418- (Laminarionema elsbetiae ELsaHSoW15)back to top |