mRNA_L-elsbetiae_contig6861.15619.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6861.15619.1 vs. uniprot
Match: A0A6H5KXM6_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM6_9PHAE) HSP 1 Score: 249 bits (635), Expect = 3.410e-73 Identity = 132/213 (61.97%), Postives = 158/213 (74.18%), Query Frame = 2 Query: 26 GEVTWGRLCVAIGRYFERKVPGARERPLESRDFDLFASDAALWRRKDGSLVSQAERKGFASVSEMSVSRERLETFWLWFWQAVTTLCSTSAWSTGGLRGRAPGFAGFMRKDEALARLSGKEPGTFLIRFSMSERGALAVHYTSTSRGRRRGELVGVIVQVSSAGELSI--RDGKRPYHDLDDLVLSLEQLRFLHPDVRKDDVFSRPERRGSWA 658 GEV WGRLC AIGRYFER+V GAR R LE+ DFDLFASD ALWR+ DG ++ + V+ + +SR++LE FW WFWQAVTTL T AWSTG L G A GFAGFM+K+ ALA LS +EPGTFL+RFS S+ GALAVHY +RRG +V IV VSSAG LS+ R G+R +HDLDDLVLS QL+FLHP +RK +VF+RP RR SW+ Sbjct: 781 GEVRWGRLCEAIGRYFERRVLGARIRRLEASDFDLFASDQALWRQSDGPPPAEMALQHGGDVAGVPISRKKLEPFWRWFWQAVTTLRRTPAWSTG-LNGPALGFAGFMKKETALALLSSEEPGTFLVRFSTSKPGALAVHYVR----KRRGTVVSGIVNVSSAGALSVEKRAGERTFHDLDDLVLSTGQLKFLHPGLRKQEVFARPRRRESWS 988
BLAST of mRNA_L-elsbetiae_contig6861.15619.1 vs. uniprot
Match: D8LEZ2_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ2_ECTSI) HSP 1 Score: 237 bits (605), Expect = 1.810e-70 Identity = 126/211 (59.72%), Postives = 148/211 (70.14%), Query Frame = 2 Query: 32 VTWGRLCVAIGRYFERKVPGARERPLESRDFDLFASDAALWRRKDGSLVSQAERKGFASVSEMSVSRERLETFWLWFWQAVTTLCSTSAWSTGGLRGRAPGFAGFMRKDEALARLSGKEPGTFLIRFSMSERGALAVHYTSTSRGRRRGELVGVIVQVSSAGELSI--RDGKRPYHDLDDLVLSLEQLRFLHPDVRKDDVFSRPERRGSWA 658 V WGRLC AIGRYFER+V GAR RPLE+ DFDLFASD ALWR+ DG ++ + V+ + +SR++LE FW WFWQAVTTL T AWSTG L G A GFAGFM+KD AL LS EPGTFL+RF HY +RRG +V IV VSSAG LS+ R G+R +HDLDDLVLS EQL+FLHP VRK +VF+RP RR SW+ Sbjct: 498 VRWGRLCEAIGRYFERRVLGARIRPLEASDFDLFASDEALWRQSDGPPPAETALQHGGDVAGVPISRKKLEPFWRWFWQAVTTLRRTPAWSTG-LHGPALGFAGFMKKDTALTLLSSAEPGTFLVRFXXXXXXXXXXHYVR----KRRGTVVSGIVNVSSAGALSVEKRAGERTFHDLDDLVLSTEQLKFLHPGVRKQEVFARPRRRESWS 703
BLAST of mRNA_L-elsbetiae_contig6861.15619.1 vs. uniprot
Match: A0A7M5WWD3_9CNID (Signal transducer and activator of transcription n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5WWD3_9CNID) HSP 1 Score: 58.2 bits (139), Expect = 2.950e-6 Identity = 56/210 (26.67%), Postives = 93/210 (44.29%), Query Frame = 2 Query: 29 EVTWGRLCVAIGRYFERKVPGARERPLESRDFDLFASDAALWRRK------DGSLVSQAERKGFASVSEMSVSRERLETFWLWFWQAVTTLCST--SAWSTGGLRGRAPGFAGFMRKDEALARLSGKEPGTFLIRFSMSERGALAVHYTSTSRGRRRGELVGVIVQVSSAGELSIRDGKRPYHDLDDLVLSLEQLRFLHPDVRKDDVFSR 634 EVTW + VA+ R + + D +L + R K D +++ + +A ++ + + R TFW WF A+ + W L FM + A +L K PGTFLIRFS E GA+ + + + GR+ E+ +Q S+ + SIR+ L D + + +L +L+P++RK+ F R Sbjct: 535 EVTWKDMSVAL-----------NARWMMTSDNELHSDHLMYLREKIFSNVADKEMITPETKIPWALFNKEPL-KGRSFTFWEWFHGAIEVVRKNLKEHWKDSTLE--------FMSRQTAHQKLLEKTPGTFLIRFSDGELGAVTIAWCNERHGRK--EIW--YLQPWSSKDFSIRN-------LADRIFDIPELTYLYPNIRKEQAFGR 713
BLAST of mRNA_L-elsbetiae_contig6861.15619.1 vs. uniprot
Match: A0A6A3NIE2_9STRA (SH2 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NIE2_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 3.030e-6 Identity = 56/216 (25.93%), Postives = 88/216 (40.74%), Query Frame = 2 Query: 20 KEGEVTWGRLCVAIGRYFERKVPG-ARERPLESRDFDLFASDAALWRRKDGSLVSQAERKGFASVSEMSVSRERLETFWLWFWQAVTTLCSTSAWSTGGLRGRAPGFA-GFMRKDEALARLSGKEPGTFLIRFSMSERGALAVHYTSTSRGRRRGELVGVIVQVSSAGELSIRDGKR----------PYHDLDDLVLSLEQLRFLHPDVRKDDVFS 631 K+ + W + + +F K+ G A RPL +R D + + +W G V+ A+R G +VS FW WF V + ++ W R P GF+ K L+ L GTFL+RFS + + + Y R + + V V Q G G+ + L +L+LS+ L+FL P K+ F+ Sbjct: 779 KDIPLDW--IAPQVSCFFATKLKGDAARRPLSTRSIDFLSKSSLIW---GGEGVAPAQRGG-------AVSLRMFAAFWRWFRPLVDCILYSTLW-----RHTEPRLLHGFLSKGACLSMLERAPTGTFLLRFSETRLRCIVIVYV---RDDQCVQFVPVTWQPDRGGWFVALQGEANTDGAEGNGVTFPTLQELILSVNVLKFLFPQTPKEAAFT 974
BLAST of mRNA_L-elsbetiae_contig6861.15619.1 vs. uniprot
Match: G4ZYP8_PHYSP (SH2 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZYP8_PHYSP) HSP 1 Score: 57.8 bits (138), Expect = 4.090e-6 Identity = 52/215 (24.19%), Postives = 88/215 (40.93%), Query Frame = 2 Query: 20 KEGEVTWGRLCVAIGRYFERKVPG-ARERPLESRDFDLFASDAALWRRKDGSLVSQAERKGFASVSEMSVSRERLETFWLWFWQAVTTLCSTSAWSTGGLRGRAPGFAGFMRKDEALARLSGKEPGTFLIRFSMSERGALAVHYTSTSR---------GRRRGELVGVIVQVSSAGELSIRDGKR-PYHDLDDLVLSLEQLRFLHPDVRKDDVFS 631 K+ + W + + +F K+ G A RPL +R D + + +W R+ ++ A+R G +VS FW WF V + ++ W R GF+ K ++ L PGTFL+RFS + + + Y + RG+ V + +G + L +L+LS+ L+FL P K+ F+ Sbjct: 780 KDIPLDW--IAPQVSCFFATKLKGDAARRPLSTRSIDFLSKSSLIWGREG---IAPAQRGG-------AVSLRMFAAFWGWFRPLVDCVLYSTLWPHTEPRL----LHGFLSKGACVSMLESAPPGTFLLRFSETRMRCIVIVYVRDDQCVQFVPVNWQPERGDW---FVALQGGANSGAAEGNGVTFPTLQELILSVNVLKFLFPQTPKEAAFT 975
BLAST of mRNA_L-elsbetiae_contig6861.15619.1 vs. uniprot
Match: A0A1S3NW14_SALSA (Signal transducer and activator of transcription n=25 Tax=Salmonidae TaxID=8015 RepID=A0A1S3NW14_SALSA) HSP 1 Score: 54.3 bits (129), Expect = 5.650e-5 Identity = 37/101 (36.63%), Postives = 51/101 (50.50%), Query Frame = 2 Query: 341 GFMRKDEALARLSGKEPGTFLIRFSMSERGALAVHYTSTSRGRRRGELVGVIVQVSSAGELS---IRDGKRPYHDLDDLVLSLEQLRFLHPDVRKDDVFSR 634 GF+ K+ ARL KEPGTFL+RFS S G + + S GE + V+ + LS D R Y + D + L+FL+PD+ KD+ F R Sbjct: 574 GFVSKETERARLKDKEPGTFLLRFSESHLGGITFTWVEQSDS---GEAKFISVEPYTKSRLSALPFADIIRDYKVITDGEVPENPLKFLYPDIPKDEAFGR 671
BLAST of mRNA_L-elsbetiae_contig6861.15619.1 vs. uniprot
Match: C0HA55_SALSA (Signal transducer and activator of transcription n=30 Tax=Salmonidae TaxID=8015 RepID=C0HA55_SALSA) HSP 1 Score: 54.3 bits (129), Expect = 5.650e-5 Identity = 37/101 (36.63%), Postives = 51/101 (50.50%), Query Frame = 2 Query: 341 GFMRKDEALARLSGKEPGTFLIRFSMSERGALAVHYTSTSRGRRRGELVGVIVQVSSAGELS---IRDGKRPYHDLDDLVLSLEQLRFLHPDVRKDDVFSR 634 GF+ K+ ARL KEPGTFL+RFS S G + + S GE + V+ + LS D R Y + D + L+FL+PD+ KD+ F R Sbjct: 575 GFVSKETERARLKDKEPGTFLLRFSESHLGGITFTWVEQSDS---GEAKFISVEPYTKSRLSALPFADIIRDYKVITDGEVPENPLKFLYPDIPKDEAFGR 672
BLAST of mRNA_L-elsbetiae_contig6861.15619.1 vs. uniprot
Match: A0A8C6UHH2_9GOBI (Signal transducer and activator of transcription n=5 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6UHH2_9GOBI) HSP 1 Score: 54.3 bits (129), Expect = 5.700e-5 Identity = 42/118 (35.59%), Postives = 59/118 (50.00%), Query Frame = 2 Query: 341 GFMRKDEALARLSGKEPGTFLIRFSMSERGALAVHYTSTSRGRRRGELVGVIVQVSSAGELS---IRDGKRPYHDLDDLVLSLEQLRFLHPDVRKDDVFSR-----PERRGSWATGEG 670 GF+ K+ L KEPGTFL+RFS S G + +T RG GE+ V+ + LS D R Y + D V+ L+FL+PD+ KD+ F R P + + TG+G Sbjct: 557 GFVSKETERTLLKDKEPGTFLLRFSESHLGGIT--FTWVDRGDN-GEVKFNSVEPYTKNRLSALPFADIIRDYKVISDGVVPENPLKFLYPDIPKDEAFGRLYNSQPSKGETGETGQG 671
BLAST of mRNA_L-elsbetiae_contig6861.15619.1 vs. uniprot
Match: A0A8C7H2F6_ONCKI (Signal transducer and activator of transcription n=2 Tax=Oncorhynchus TaxID=8016 RepID=A0A8C7H2F6_ONCKI) HSP 1 Score: 53.9 bits (128), Expect = 7.610e-5 Identity = 37/101 (36.63%), Postives = 51/101 (50.50%), Query Frame = 2 Query: 341 GFMRKDEALARLSGKEPGTFLIRFSMSERGALAVHYTSTSRGRRRGELVGVIVQVSSAGELS---IRDGKRPYHDLDDLVLSLEQLRFLHPDVRKDDVFSR 634 GF+ K+ ARL KEPGTFL+RFS S G + + S GE + V+ + LS D R Y + D + L+FL+PD+ KD+ F R Sbjct: 554 GFVSKETERARLKDKEPGTFLLRFSESHLGGITFTWVEQSDS---GEAKFISVEPYTKSRLSALPFADIIRDYKVIADGEVPENPLKFLYPDIPKDEAFGR 651
BLAST of mRNA_L-elsbetiae_contig6861.15619.1 vs. uniprot
Match: A0A8C7MFM6_ONCKI (Signal transducer and activator of transcription n=4 Tax=Oncorhynchus TaxID=8016 RepID=A0A8C7MFM6_ONCKI) HSP 1 Score: 53.9 bits (128), Expect = 7.610e-5 Identity = 37/101 (36.63%), Postives = 51/101 (50.50%), Query Frame = 2 Query: 341 GFMRKDEALARLSGKEPGTFLIRFSMSERGALAVHYTSTSRGRRRGELVGVIVQVSSAGELS---IRDGKRPYHDLDDLVLSLEQLRFLHPDVRKDDVFSR 634 GF+ K+ ARL KEPGTFL+RFS S G + + S GE + V+ + LS D R Y + D + L+FL+PD+ KD+ F R Sbjct: 568 GFVSKETERARLKDKEPGTFLLRFSESHLGGITFTWVEQSDS---GEAKFISVEPYTKSRLSALPFADIIRDYKVIADGEVPENPLKFLYPDIPKDEAFGR 665 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6861.15619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6861.15619.1 >prot_L-elsbetiae_contig6861.15619.1 ID=prot_L-elsbetiae_contig6861.15619.1|Name=mRNA_L-elsbetiae_contig6861.15619.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp GCQGGGKGRRGDMGPAVRGDRAVLREEGPGGPRTAAREQRLRPVRVGRGAback to top mRNA from alignment at L-elsbetiae_contig6861:6210..6884+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6861.15619.1 ID=mRNA_L-elsbetiae_contig6861.15619.1|Name=mRNA_L-elsbetiae_contig6861.15619.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=675bp|location=Sequence derived from alignment at L-elsbetiae_contig6861:6210..6884+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6861:6210..6884+ >mRNA_L-elsbetiae_contig6861.15619.1 ID=mRNA_L-elsbetiae_contig6861.15619.1|Name=mRNA_L-elsbetiae_contig6861.15619.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1350bp|location=Sequence derived from alignment at L-elsbetiae_contig6861:6210..6884+ (Laminarionema elsbetiae ELsaHSoW15)back to top |