mRNA_L-elsbetiae_contig6742.15491.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6742.15491.1 vs. uniprot
Match: A0A6H5JZQ3_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ3_9PHAE) HSP 1 Score: 216 bits (550), Expect = 1.540e-61 Identity = 114/208 (54.81%), Postives = 148/208 (71.15%), Query Frame = 3 Query: 261 GSLLAEPHIRFLLFTFAIYSFAIAGVEDVYALWALSTVPKGGLDWSTKEIGQVLLMCGMMVFTFELLVLPVLLKRVGICTCRRVGAAILVPAFLLLPQLSSLQGTGYPIIVASVAVLFTIYVACDSFYTGISLAINNACSPDRRGQLNGIASSVASVAGAVGPAVWLALFAFSIE--GGRHAFPF--DFHLTFYVMAALRLAVAFCMW 872 GSLLA H+R LL + IY+F I+G ED++ALWALST P GGLDWS ++IGQVLL G+MVF FEL +P++ KR+G+ +R+ + LV L+P L L TG+ +++ASV +LFT+Y CD+FYT IS AINNA P+R G++NG+A+ VASV AVGPA W AL+AFS+E GR FPF DF L F++MA LRL VA W Sbjct: 238 GSLLAAGHVRVLLVVYGIYTFIISGFEDLFALWALSTTPVGGLDWSAEQIGQVLLASGLMVFVFELFAVPLVTKRLGVTISQRLSSITLVFVLPLVPVLGRLPNTGHLLMIASVGLLFTVYSTCDAFYTCISFAINNAAEPERCGEVNGLAACVASVVSAVGPAAWSALYAFSVEFADGRSPFPFPIDFRLAFWLMAFLRLVVAILSW 445
BLAST of mRNA_L-elsbetiae_contig6742.15491.1 vs. uniprot
Match: D8LFV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV4_ECTSI) HSP 1 Score: 197 bits (501), Expect = 6.090e-57 Identity = 106/206 (51.46%), Postives = 138/206 (66.99%), Query Frame = 3 Query: 255 KGGSLLAEPHIRFLLFTFAIYSFAIAGVEDVYALWALSTVPKGGLDWSTKEIGQVLLMCGMMVFTFELLVLPVLLKRVGICTCRRVGAAILVPAFLLLPQLSSLQGTGYPIIVASVAVLFTIYVACDSFYTGISLAINNACSPDRRGQLNGIASSVASVAGAVGPAVWLALFAFSIE----GGRHAFPFDFHLTFYVMAALRLAVA 860 K GSLLA H+R LL + I F I+G ED++ALWALST P GGL WS ++IGQVLL G+MVF FEL +P++ KR+G+ T +R+ + LV L+P L L G+ +++ASV +LF IY CD+F T IS INNA P+R G+LNG+A+ VASV VGP+ W L+AFS+E G FP DF L F++MA LRL VA Sbjct: 38 KRGSLLAAGHVRVLLVIYGICMFIISGFEDLFALWALSTTPAGGLGWSAEQIGQVLLASGLMVFVFELFAVPLVTKRLGVTTSQRLSSVTLVFVLPLVPVLGHLLNAGHLLMIASVGLLFKIYAPCDAFLTCISFTINNAAEPERCGELNGLAACVASVVSKVGPSAWSTLYAFSVEVTDGGSPFPFPIDFRLAFWLMAFLRLVVA 243
BLAST of mRNA_L-elsbetiae_contig6742.15491.1 vs. uniprot
Match: D8LRH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH7_ECTSI) HSP 1 Score: 174 bits (442), Expect = 2.190e-44 Identity = 89/209 (42.58%), Postives = 134/209 (64.11%), Query Frame = 3 Query: 267 LLAEPHIRFLLFTFAIYSFAIAGVEDVYALWALSTVPKGGLDWSTKEIGQVLLMCGMMVFTFELLVLPVLLKRVGICTCRRVGAAILVPAFLLLPQLSSLQGTGYPIIVASVAVLFTIYVACDSFYTGISLAINNACSPDRRGQLNGIASSVASVAGAVGPAVWLALFAFSIEG-GRHAFPFDFHLTFYVMAALRLAVAFCMWDASLQE 890 LL E +R +LF + IYSF++ G ++Y LWALSTV GGLDW+TK+IGQVL + G+ + F+L+V P L KR+G+ +R + +P + P LS L+G+G P++V S+ + F V + + I+LA NNA P RR LNG++ ++ S+A A GPA + A+FA+SI+ GR FP D+HL FY++A AV + W+ + + Sbjct: 461 LLEEKRVRAILFVYGIYSFSLIGFGEIYPLWALSTVASGGLDWTTKQIGQVLSLVGVGMLAFQLVVYPWLSKRIGVTRSQRWACFLAIPVYAFFPFLSRLRGSGVPLVVGSIVLNFFSNVTATAVFINIALATNNAVEPSRRATLNGLSMTLGSLAKAAGPAFFSAIFAWSIDDDGRRPFPLDYHLVFYLLALSMTAVCWASWNVIIDD 669
BLAST of mRNA_L-elsbetiae_contig6742.15491.1 vs. uniprot
Match: D8LRH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH9_ECTSI) HSP 1 Score: 172 bits (435), Expect = 1.570e-43 Identity = 96/257 (37.35%), Postives = 144/257 (56.03%), Query Frame = 3 Query: 210 ALSVAVEKEGFGGSTKGGS------------------LLAEPHIRFLLFTFAIYSFAIAGVEDVYALWALSTVPKGGLDWSTKEIGQVLLMCGMMVFTFELLVLPVLLKRVGICTCRRVGAAILVPAFLLLPQLSSLQGTGYPIIVASVAVLFTIYVACDSFYTGISLAINNACSPDRRGQLNGIASSVASVAGAVGPAVWLALFAFSIEGGRHAFPFDFHLTFYVMAALRLAVAFCMWDASLQEEGVADHN*SGVM 926 AL + +GFG S GG LL E R ++F +A++SF G ++Y LWALSTV GGLDWS+K+IGQ L +CG+ + F+LLV P L KR+G +R + +P FL+ P LS L+GT ++ AS+ +LF ++ + ++LA NNA P RRG L G++ + S+A A GP + ++FA+SI+G R FP D+HL FY++A + V++ W E V + + V+ Sbjct: 381 ALQRLEKAKGFGDSDSGGEGRWGRRSTCWRECLVPIQLLTERRTRNVMFVYALFSFVAIGNRELYPLWALSTVASGGLDWSSKQIGQALSVCGIFMLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTVFINVALATNNAVEPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSIDGRRRPFPLDYHLAFYLLALGMVLVSWASWGTICSPEPVQSQSAACVV 637
BLAST of mRNA_L-elsbetiae_contig6742.15491.1 vs. uniprot
Match: D7G0M0_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M0_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 1.130e-18 Identity = 70/223 (31.39%), Postives = 111/223 (49.78%), Query Frame = 3 Query: 213 LSVAVEKEGFGGSTKGGSLLAEPHIRFLLFTFAIYSFAIAGVEDVYALWALSTVPKGGLDWSTKEIGQVLLMCGMMVFTFELLVLPVLLKRVGICTCRRVGAAILVPAFLLLPQLSSLQGTGYPIIVASVAVLFTIYVACDSFYTGISLAINNACSPDRRGQLNGIASSVASVAGAVGPAVWLALFAFSIEGGR-HAFP--FDFHLTFYVMAALRLAVAFCMW 872 LS A + + G G LLA PH++ +LF I + G ++VY L+ALST GGL W+T +IGQV+++ G+++ +L++ P +K VGI +R+G + V AFL +P L+S+ + SV I + S +SL RG+L G+ ++ S+ GP + +A+S+ AF D+HL F A + V W Sbjct: 315 LSAAEQGDEEQGLFGPGGLLARPHVKLVLFLGCIIATLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSPSTLEAFGGWVDYHLVFCASALALVVVGVMAW 537
BLAST of mRNA_L-elsbetiae_contig6742.15491.1 vs. uniprot
Match: A0A6H5JH24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH24_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 1.280e-18 Identity = 66/207 (31.88%), Postives = 104/207 (50.24%), Query Frame = 3 Query: 261 GSLLAEPHIRFLLFTFAIYSFAIAGVEDVYALWALSTVPKGGLDWSTKEIGQVLLMCGMMVFTFELLVLPVLLKRVGICTCRRVGAAILVPAFLLLPQLSSLQGTGYPIIVASVAVLFTIYVACDSFYTGISLAINNACSPDRRGQLNGIASSVASVAGAVGPAVWLALFAFSIEGGR-HAFP--FDFHLTFYVMAALRLAVAFCMW 872 G LLA H++ +LF I + G ++VY L+ALST GGL W+T +IGQVL+M G+M+ + ++ P +K VGI + +R+G + V FL +P L+S+ + SV I + S +SL RG+L G+ ++ S+ GP + +A+S+ AF D+H FY+ A + V W Sbjct: 161 GGLLARRHVKLVLFLGCISATLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVLVMAGLMLAVCQFVLFPSFIKMVGITSFQRLGCGVGVATFLAVPGLTSIGWDYDSLFSLSVVANNLILCSLGSITLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSPSTLEAFGGWVDYHFVFYLSALALVVVGVMAW 367
BLAST of mRNA_L-elsbetiae_contig6742.15491.1 vs. uniprot
Match: A0A6H5JAX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAX4_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 3.550e-18 Identity = 84/227 (37.00%), Postives = 116/227 (51.10%), Query Frame = 3 Query: 195 GNEPCALSVAVEKEGFGGSTKGGSLLAEPHIRFLLFTFAIYSFAIAGVEDVYALWALSTVPKGGLDWSTKEIGQVLLMCGMMVFTFELLVLPVLLKRVGICTCRRVGAAILVPAFLLLPQLSSLQGTGYPIIVASVAVLFTIYVACDSFYTGISLAI--NNACSPDRRGQLNGI---ASSVASVAGAVGPAVWLALFAFSIEGGRHAFPFDFHLTFYVMAALRLAVA 860 G + C V +E G GG LL+ P ++ LLF + +AG E+V+ LWALSTV GGLDW T EIG+VL + G ++ ++ + P ++K +G T R G + + FL P + VASVA + TI V C GI+LA+ + S RG+L+G+ A S A AVG AV LFA+SI + D FY +AL L VA Sbjct: 289 GLDACEPPVTSNREQQGHCGPGG-LLSVPRVKPLLFLVCVVQSLLAGFEEVFPLWALSTVGVGGLDWGTMEIGKVLFVSGCIMVVAQVFIFPSVIKILGAVTWMRTGCLLGICTFLATPNAKLFSWNYTTLFVASVASV-TI-VNCSLAAVGIALAVASTDIVSSRLRGKLSGLYGTAESFGRFASAVGSAV---LFAWSISSDNLGWV-DHRFVFY-SSALALGVA 507
BLAST of mRNA_L-elsbetiae_contig6742.15491.1 vs. uniprot
Match: A0A6H5KX19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX19_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 4.570e-18 Identity = 57/145 (39.31%), Postives = 90/145 (62.07%), Query Frame = 3 Query: 408 IGQVLLMCGMMVFTFELLVLPVLLKRVGICTCRRVGAAILVPAFLLLPQLSSLQGTGYPIIVASVAVLFTIYVACDSFYTGISLAINNACSPDRRGQLNGIASSVASVAGAVGPAVWLALFAFSIEG-GRHAFPFDFHLTFYVMA 839 I VL + G+ + TF+L+V P L KR+G+ +R + + + + P LS L+G+G ++V S+ + F V + +T ++LA NNA P R LNG++ + S+A AVGPA + A+FA+SI+ GR FP D+HL FY++A Sbjct: 550 IYSVLSLVGVGMLTFQLVVYPWLSKRIGVTGSQRWACFLAILVYAVFPFLSRLRGSGVLLVVGSIVLNFFSNVTATAVFTNVALATNNAVEPSRWATLNGLSMMLGSLAKAVGPAFFSAIFAWSIDDDGRRPFPLDYHLVFYLLA 694
BLAST of mRNA_L-elsbetiae_contig6742.15491.1 vs. uniprot
Match: D8LJX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX7_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 1.630e-17 Identity = 69/207 (33.33%), Postives = 107/207 (51.69%), Query Frame = 3 Query: 267 LLAEPHIRFLLFTFAIYSFAIAGVEDVYALWALSTVPKGGLDWSTKEIGQVLLMCGMMVFTFELLVLPVLLKRVGICTCRRVGAAILVPAFLLLPQLSSLQGTGYPIIVASVAVLFTIYVACDSFYTGISLAINNACS-PDR-RGQLNGIASSVASVAGAVGPAVWLALFAFSIEGGRHAFPFD---FHLTFYVMAALRLAVAFCMW 872 LL PH++ LL + G E+ Y L+ALST GGL W+T +IG+VL+M G+ + F+LL+LP L+K VGI +RVG + AF+ +P + L + ASVA + +C +++++ + P R RG+L G+ + S+ +GPA + +A+S+ A FD F F+V A L A W Sbjct: 169 LLVTPHVKTLLTLGCVVQALQIGFEEAYPLFALSTPDVGGLGWNTFQIGKVLVMTGLFMACFQLLLLPPLIKVVGITNWQRVGFVVGALAFIAIPSVRLLSWNYPSLFSASVAA--NTFASCGLAAVTLAMSVGSTTLVPSRMRGKLGGLYNMAESLGRFLGPAGFAITYAWSVSPSSSAAGFDWVNFRFVFWVSAVLLALCAVLAW 373
BLAST of mRNA_L-elsbetiae_contig6742.15491.1 vs. uniprot
Match: A0A6H5K5T8_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T8_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 2.290e-17 Identity = 70/213 (32.86%), Postives = 109/213 (51.17%), Query Frame = 3 Query: 267 LLAEPHIRFLLFTFAIYSFAIAGVEDVYALWALSTVPKGGLDWSTKEIGQVLLMCGMMVFTFELLVLPVLLKRVGICTCRRVGAAILVPAFLLLPQLSSLQGTGYPIIVASVAVLFTIYVACDSFYTGISLAINNACS-PDR-RGQLNGIASSVASVAGAVGPAVWLALFAFSIEGGRHAFPFD---FHLTFYVMAALRLAVAFCMWDASLQE 890 LLA PH++ LL + G ++ Y L+ALST GGL W+T +IG+VL+M G+ + F+LL+LP L+K VGI +RVG + AF+ +P + SL + ASVAV + +C +++++ + P R RG+L G+ + S+ +GPA + +A+S+ A D F F+ A L A W E Sbjct: 337 LLATPHVKTLLTLGCVVMALQIGFDEAYPLFALSTPDVGGLGWNTLQIGKVLVMTGLFMACFQLLLLPPLIKVVGITKWQRVGFCVGALAFIAIPSVRSLSWNYPSLFSASVAV--NTFASCGLAAVALTMSVGSTTLVPSRMRGKLGGLYNMAESLGRFLGPAGFAISYAWSVSPSSSAAGVDWVNFRFVFWASAVLLAMCAVLAWSTLTAE 547 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6742.15491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6742.15491.1 >prot_L-elsbetiae_contig6742.15491.1 ID=prot_L-elsbetiae_contig6742.15491.1|Name=mRNA_L-elsbetiae_contig6742.15491.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=163bp MCGMMVFTFELLVLPVLLKRVGICTCRRVGAAILVPAFLLLPQLSSLQGTback to top mRNA from alignment at L-elsbetiae_contig6742:4158..6660+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6742.15491.1 ID=mRNA_L-elsbetiae_contig6742.15491.1|Name=mRNA_L-elsbetiae_contig6742.15491.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2503bp|location=Sequence derived from alignment at L-elsbetiae_contig6742:4158..6660+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6742:4158..6660+ >mRNA_L-elsbetiae_contig6742.15491.1 ID=mRNA_L-elsbetiae_contig6742.15491.1|Name=mRNA_L-elsbetiae_contig6742.15491.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=978bp|location=Sequence derived from alignment at L-elsbetiae_contig6742:4158..6660+ (Laminarionema elsbetiae ELsaHSoW15)back to top |