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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 1241 |
Cds size | 1203 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816744.4372408-UTR-L-elsbetiae_contig6719:5099..5108 | 1622816744.4372408-UTR-L-elsbetiae_contig6719:5099..5108 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6719 5100..5108 + |
1691683781.004751-UTR-L-elsbetiae_contig6719:5099..5108 | 1691683781.004751-UTR-L-elsbetiae_contig6719:5099..5108 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6719 5100..5108 + |
1622816744.4609137-UTR-L-elsbetiae_contig6719:6311..6340 | 1622816744.4609137-UTR-L-elsbetiae_contig6719:6311..6340 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6719 6312..6340 + |
1691683781.0276034-UTR-L-elsbetiae_contig6719:6311..6340 | 1691683781.0276034-UTR-L-elsbetiae_contig6719:6311..6340 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6719 6312..6340 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816744.4475663-CDS-L-elsbetiae_contig6719:5108..6311 | 1622816744.4475663-CDS-L-elsbetiae_contig6719:5108..6311 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6719 5109..6311 + |
1691683781.016658-CDS-L-elsbetiae_contig6719:5108..6311 | 1691683781.016658-CDS-L-elsbetiae_contig6719:5108..6311 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6719 5109..6311 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6719.15462.1 >prot_L-elsbetiae_contig6719.15462.1 ID=prot_L-elsbetiae_contig6719.15462.1|Name=mRNA_L-elsbetiae_contig6719.15462.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=401bp
MNIVANEATLTAAAATSEHLLGAGGTLLEPPQATEDGVGDPAAADSAEPG EVVRENAPTRDEIDDALVEEGADSMKTVAIDGNSAETDPLLPDGSFLGGP VAISGDLDAPVVSDTLEPGGDLSDADLNPRVVVDTAQGHNSDGDDTLSSM SADAGLHSPSAYTEVTDAPQNLQDICGPGNDSSDTNIAGAEVAVEPESRV GEVATTPLTTDDEENSHPKNSTSTGSQGVLTVLEPAGHASEPVEGVAVQG EEEEPQPHRAEVGAGVTSTDKAAERQDDDDSVQEESLVRDAAGAGTEISP GNIVDGDGGGTDSSSFEAFDDLSSSAGEVAEGEGATPEGVAVRRSMEEGP DTPGFSVGEEALGSQGKVAAAAKAGAGHLVAGEGLVGELPAEDSFENMGG * back to topmRNA from alignment at L-elsbetiae_contig6719:5100..6340+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig6719.15462.1 ID=mRNA_L-elsbetiae_contig6719.15462.1|Name=mRNA_L-elsbetiae_contig6719.15462.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1241bp|location=Sequence derived from alignment at L-elsbetiae_contig6719:5100..6340+ (Laminarionema elsbetiae ELsaHSoW15) GCGGATTCTATGAACATCGTTGCCAACGAAGCAACACTAACAGCTGCAGC
TGCAACAAGCGAACACCTGCTGGGAGCGGGGGGAACACTGCTGGAGCCAC
CGCAGGCGACAGAAGATGGTGTTGGCGATCCCGCCGCCGCCGACAGTGCC
GAACCTGGTGAGGTTGTAAGAGAAAATGCACCCACCAGAGACGAGATCGA
CGACGCGCTGGTGGAGGAGGGAGCGGATTCTATGAAAACCGTCGCCATCG
ACGGCAATTCCGCCGAAACCGACCCGCTGCTCCCTGATGGTTCCTTCCTT
GGCGGTCCTGTTGCAATCAGCGGCGACCTTGATGCTCCAGTTGTATCGGA
TACTTTGGAACCTGGTGGCGATCTGTCAGACGCCGACCTTAATCCCCGAG
TTGTTGTTGACACCGCACAAGGCCACAATTCCGACGGCGACGACACCTTG
AGTTCGATGTCAGCTGATGCTGGTCTTCATTCTCCGTCAGCATATACAGA
AGTAACCGACGCTCCGCAGAACCTGCAAGACATTTGCGGTCCAGGCAACG
ACAGCAGTGATACTAATATTGCCGGTGCTGAAGTCGCCGTGGAACCAGAG
AGCAGGGTAGGGGAAGTGGCGACCACACCACTCACAACGGACGACGAAGA
AAACAGCCATCCGAAAAACTCGACATCCACGGGAAGCCAAGGTGTTTTGA
CGGTGCTGGAACCTGCCGGTCACGCGTCGGAACCGGTCGAAGGCGTTGCG
GTTCAGGGCGAAGAGGAGGAACCACAGCCTCACCGAGCAGAGGTGGGTGC
GGGAGTGACATCAACTGACAAAGCTGCGGAACGGCAAGACGATGATGATT
CGGTACAAGAAGAGAGCTTGGTACGAGATGCAGCGGGAGCAGGAACGGAG
ATCAGTCCAGGAAACATCGTAGACGGAGATGGAGGGGGCACTGATAGCAG
CAGTTTTGAGGCCTTCGACGATCTGAGTAGCAGTGCGGGAGAAGTCGCCG
AAGGCGAAGGCGCCACGCCCGAGGGTGTTGCTGTCAGGAGAAGTATGGAG
GAAGGCCCTGATACGCCCGGGTTTTCTGTTGGAGAAGAAGCCCTTGGTAG
TCAGGGTAAGGTTGCTGCGGCCGCCAAAGCTGGAGCGGGACACCTAGTAG
CAGGAGAAGGGCTTGTAGGCGAACTGCCCGCGGAAGATTCCTTCGAAAAT
ATGGGAGGATGAGTTAGCTGCCCCCCCCTACTTTCCGGCGG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig6719:5100..6340+ >mRNA_L-elsbetiae_contig6719.15462.1 ID=mRNA_L-elsbetiae_contig6719.15462.1|Name=mRNA_L-elsbetiae_contig6719.15462.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2406bp|location=Sequence derived from alignment at L-elsbetiae_contig6719:5100..6340+ (Laminarionema elsbetiae ELsaHSoW15) ATGAACATCGTTGCCAACGAAGCAACACTAACAGCTGCAGCTGCAACAAG CGAACACCTGCTGGGAGCGGGGGGAACACTGCTGGAGCCACCGCAGGCGA CAGAAGATGGTGTTGGCGATCCCGCCGCCGCCGACAGTGCCGAACCTGGT GAGGTTGTAAGAGAAAATGCACCCACCAGAGACGAGATCGACGACGCGCT GGTGGAGGAGGGAGCGGATTCTATGAAAACCGTCGCCATCGACGGCAATT CCGCCGAAACCGACCCGCTGCTCCCTGATGGTTCCTTCCTTGGCGGTCCT GTTGCAATCAGCGGCGACCTTGATGCTCCAGTTGTATCGGATACTTTGGA ACCTGGTGGCGATCTGTCAGACGCCGACCTTAATCCCCGAGTTGTTGTTG ACACCGCACAAGGCCACAATTCCGACGGCGACGACACCTTGAGTTCGATG TCAGCTGATGCTGGTCTTCATTCTCCGTCAGCATATACAGAAGTAACCGA CGCTCCGCAGAACCTGCAAGACATTTGCGGTCCAGGCAACGACAGCAGTG ATACTAATATTGCCGGTGCTGAAGTCGCCGTGGAACCAGAGAGCAGGGTA GGGGAAGTGGCGACCACACCACTCACAACGGACGACGAAGAAAACAGCCA TCCGAAAAACTCGACATCCACGGGAAGCCAAGGTGTTTTGACGGTGCTGG AACCTGCCGGTCACGCGTCGGAACCGGTCGAAGGCGTTGCGGTTCAGGGC GAAGAGGAGGAACCACAGCCTCACCGAGCAGAGGTGGGTGCGGGAGTGAC ATCAACTGACAAAGCTGCGGAACGGCAAGACGATGATGATTCGGTACAAG AAGAGAGCTTGGTACGAGATGCAGCGGGAGCAGGAACGGAGATCAGTCCA GGAAACATCGTAGACGGAGATGGAGGGGGCACTGATAGCAGCAGTTTTGA GGCCTTCGACGATCTGAGTAGCAGTGCGGGAGAAGTCGCCGAAGGCGAAG GCGCCACGCCCGAGGGTGTTGCTGTCAGGAGAAGTATGGAGGAAGGCCCT GATACGCCCGGGTTTTCTGTTGGAGAAGAAGCCCTTGGTAGTCAGGGTAA GGTTGCTGCGGCCGCCAAAGCTGGAGCGGGACACCTAGTAGCAGGAGAAG GGCTTGTAGGCGAACTGCCCGCGGAAGATTCCTTCGAAAATATGGGAGGA TGAATGAACATCGTTGCCAACGAAGCAACACTAACAGCTGCAGCTGCAAC AAGCGAACACCTGCTGGGAGCGGGGGGAACACTGCTGGAGCCACCGCAGG CGACAGAAGATGGTGTTGGCGATCCCGCCGCCGCCGACAGTGCCGAACCT GGTGAGGTTGTAAGAGAAAATGCACCCACCAGAGACGAGATCGACGACGC GCTGGTGGAGGAGGGAGCGGATTCTATGAAAACCGTCGCCATCGACGGCA ATTCCGCCGAAACCGACCCGCTGCTCCCTGATGGTTCCTTCCTTGGCGGT CCTGTTGCAATCAGCGGCGACCTTGATGCTCCAGTTGTATCGGATACTTT GGAACCTGGTGGCGATCTGTCAGACGCCGACCTTAATCCCCGAGTTGTTG TTGACACCGCACAAGGCCACAATTCCGACGGCGACGACACCTTGAGTTCG ATGTCAGCTGATGCTGGTCTTCATTCTCCGTCAGCATATACAGAAGTAAC CGACGCTCCGCAGAACCTGCAAGACATTTGCGGTCCAGGCAACGACAGCA GTGATACTAATATTGCCGGTGCTGAAGTCGCCGTGGAACCAGAGAGCAGG GTAGGGGAAGTGGCGACCACACCACTCACAACGGACGACGAAGAAAACAG CCATCCGAAAAACTCGACATCCACGGGAAGCCAAGGTGTTTTGACGGTGC TGGAACCTGCCGGTCACGCGTCGGAACCGGTCGAAGGCGTTGCGGTTCAG GGCGAAGAGGAGGAACCACAGCCTCACCGAGCAGAGGTGGGTGCGGGAGT GACATCAACTGACAAAGCTGCGGAACGGCAAGACGATGATGATTCGGTAC AAGAAGAGAGCTTGGTACGAGATGCAGCGGGAGCAGGAACGGAGATCAGT CCAGGAAACATCGTAGACGGAGATGGAGGGGGCACTGATAGCAGCAGTTT TGAGGCCTTCGACGATCTGAGTAGCAGTGCGGGAGAAGTCGCCGAAGGCG AAGGCGCCACGCCCGAGGGTGTTGCTGTCAGGAGAAGTATGGAGGAAGGC CCTGATACGCCCGGGTTTTCTGTTGGAGAAGAAGCCCTTGGTAGTCAGGG TAAGGTTGCTGCGGCCGCCAAAGCTGGAGCGGGACACCTAGTAGCAGGAG AAGGGCTTGTAGGCGAACTGCCCGCGGAAGATTCCTTCGAAAATATGGGA GGATGA back to top
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