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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1241 |
| Cds size | 1203 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816744.4372408-UTR-L-elsbetiae_contig6719:5099..5108 | 1622816744.4372408-UTR-L-elsbetiae_contig6719:5099..5108 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6719 5100..5108 + |
| 1691683781.004751-UTR-L-elsbetiae_contig6719:5099..5108 | 1691683781.004751-UTR-L-elsbetiae_contig6719:5099..5108 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6719 5100..5108 + |
| 1622816744.4609137-UTR-L-elsbetiae_contig6719:6311..6340 | 1622816744.4609137-UTR-L-elsbetiae_contig6719:6311..6340 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6719 6312..6340 + |
| 1691683781.0276034-UTR-L-elsbetiae_contig6719:6311..6340 | 1691683781.0276034-UTR-L-elsbetiae_contig6719:6311..6340 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6719 6312..6340 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816744.4475663-CDS-L-elsbetiae_contig6719:5108..6311 | 1622816744.4475663-CDS-L-elsbetiae_contig6719:5108..6311 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6719 5109..6311 + |
| 1691683781.016658-CDS-L-elsbetiae_contig6719:5108..6311 | 1691683781.016658-CDS-L-elsbetiae_contig6719:5108..6311 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6719 5109..6311 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6719.15462.1 >prot_L-elsbetiae_contig6719.15462.1 ID=prot_L-elsbetiae_contig6719.15462.1|Name=mRNA_L-elsbetiae_contig6719.15462.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=401bp
MNIVANEATLTAAAATSEHLLGAGGTLLEPPQATEDGVGDPAAADSAEPG
EVVRENAPTRDEIDDALVEEGADSMKTVAIDGNSAETDPLLPDGSFLGGP
VAISGDLDAPVVSDTLEPGGDLSDADLNPRVVVDTAQGHNSDGDDTLSSM
SADAGLHSPSAYTEVTDAPQNLQDICGPGNDSSDTNIAGAEVAVEPESRV
GEVATTPLTTDDEENSHPKNSTSTGSQGVLTVLEPAGHASEPVEGVAVQG
EEEEPQPHRAEVGAGVTSTDKAAERQDDDDSVQEESLVRDAAGAGTEISP
GNIVDGDGGGTDSSSFEAFDDLSSSAGEVAEGEGATPEGVAVRRSMEEGP
DTPGFSVGEEALGSQGKVAAAAKAGAGHLVAGEGLVGELPAEDSFENMGG
* back to topmRNA from alignment at L-elsbetiae_contig6719:5100..6340+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig6719.15462.1 ID=mRNA_L-elsbetiae_contig6719.15462.1|Name=mRNA_L-elsbetiae_contig6719.15462.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1241bp|location=Sequence derived from alignment at L-elsbetiae_contig6719:5100..6340+ (Laminarionema elsbetiae ELsaHSoW15)
GCGGATTCTATGAACATCGTTGCCAACGAAGCAACACTAACAGCTGCAGC
TGCAACAAGCGAACACCTGCTGGGAGCGGGGGGAACACTGCTGGAGCCAC
CGCAGGCGACAGAAGATGGTGTTGGCGATCCCGCCGCCGCCGACAGTGCC
GAACCTGGTGAGGTTGTAAGAGAAAATGCACCCACCAGAGACGAGATCGA
CGACGCGCTGGTGGAGGAGGGAGCGGATTCTATGAAAACCGTCGCCATCG
ACGGCAATTCCGCCGAAACCGACCCGCTGCTCCCTGATGGTTCCTTCCTT
GGCGGTCCTGTTGCAATCAGCGGCGACCTTGATGCTCCAGTTGTATCGGA
TACTTTGGAACCTGGTGGCGATCTGTCAGACGCCGACCTTAATCCCCGAG
TTGTTGTTGACACCGCACAAGGCCACAATTCCGACGGCGACGACACCTTG
AGTTCGATGTCAGCTGATGCTGGTCTTCATTCTCCGTCAGCATATACAGA
AGTAACCGACGCTCCGCAGAACCTGCAAGACATTTGCGGTCCAGGCAACG
ACAGCAGTGATACTAATATTGCCGGTGCTGAAGTCGCCGTGGAACCAGAG
AGCAGGGTAGGGGAAGTGGCGACCACACCACTCACAACGGACGACGAAGA
AAACAGCCATCCGAAAAACTCGACATCCACGGGAAGCCAAGGTGTTTTGA
CGGTGCTGGAACCTGCCGGTCACGCGTCGGAACCGGTCGAAGGCGTTGCG
GTTCAGGGCGAAGAGGAGGAACCACAGCCTCACCGAGCAGAGGTGGGTGC
GGGAGTGACATCAACTGACAAAGCTGCGGAACGGCAAGACGATGATGATT
CGGTACAAGAAGAGAGCTTGGTACGAGATGCAGCGGGAGCAGGAACGGAG
ATCAGTCCAGGAAACATCGTAGACGGAGATGGAGGGGGCACTGATAGCAG
CAGTTTTGAGGCCTTCGACGATCTGAGTAGCAGTGCGGGAGAAGTCGCCG
AAGGCGAAGGCGCCACGCCCGAGGGTGTTGCTGTCAGGAGAAGTATGGAG
GAAGGCCCTGATACGCCCGGGTTTTCTGTTGGAGAAGAAGCCCTTGGTAG
TCAGGGTAAGGTTGCTGCGGCCGCCAAAGCTGGAGCGGGACACCTAGTAG
CAGGAGAAGGGCTTGTAGGCGAACTGCCCGCGGAAGATTCCTTCGAAAAT
ATGGGAGGATGAGTTAGCTGCCCCCCCCTACTTTCCGGCGG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig6719:5100..6340+ >mRNA_L-elsbetiae_contig6719.15462.1 ID=mRNA_L-elsbetiae_contig6719.15462.1|Name=mRNA_L-elsbetiae_contig6719.15462.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2406bp|location=Sequence derived from alignment at L-elsbetiae_contig6719:5100..6340+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACATCGTTGCCAACGAAGCAACACTAACAGCTGCAGCTGCAACAAG
CGAACACCTGCTGGGAGCGGGGGGAACACTGCTGGAGCCACCGCAGGCGA
CAGAAGATGGTGTTGGCGATCCCGCCGCCGCCGACAGTGCCGAACCTGGT
GAGGTTGTAAGAGAAAATGCACCCACCAGAGACGAGATCGACGACGCGCT
GGTGGAGGAGGGAGCGGATTCTATGAAAACCGTCGCCATCGACGGCAATT
CCGCCGAAACCGACCCGCTGCTCCCTGATGGTTCCTTCCTTGGCGGTCCT
GTTGCAATCAGCGGCGACCTTGATGCTCCAGTTGTATCGGATACTTTGGA
ACCTGGTGGCGATCTGTCAGACGCCGACCTTAATCCCCGAGTTGTTGTTG
ACACCGCACAAGGCCACAATTCCGACGGCGACGACACCTTGAGTTCGATG
TCAGCTGATGCTGGTCTTCATTCTCCGTCAGCATATACAGAAGTAACCGA
CGCTCCGCAGAACCTGCAAGACATTTGCGGTCCAGGCAACGACAGCAGTG
ATACTAATATTGCCGGTGCTGAAGTCGCCGTGGAACCAGAGAGCAGGGTA
GGGGAAGTGGCGACCACACCACTCACAACGGACGACGAAGAAAACAGCCA
TCCGAAAAACTCGACATCCACGGGAAGCCAAGGTGTTTTGACGGTGCTGG
AACCTGCCGGTCACGCGTCGGAACCGGTCGAAGGCGTTGCGGTTCAGGGC
GAAGAGGAGGAACCACAGCCTCACCGAGCAGAGGTGGGTGCGGGAGTGAC
ATCAACTGACAAAGCTGCGGAACGGCAAGACGATGATGATTCGGTACAAG
AAGAGAGCTTGGTACGAGATGCAGCGGGAGCAGGAACGGAGATCAGTCCA
GGAAACATCGTAGACGGAGATGGAGGGGGCACTGATAGCAGCAGTTTTGA
GGCCTTCGACGATCTGAGTAGCAGTGCGGGAGAAGTCGCCGAAGGCGAAG
GCGCCACGCCCGAGGGTGTTGCTGTCAGGAGAAGTATGGAGGAAGGCCCT
GATACGCCCGGGTTTTCTGTTGGAGAAGAAGCCCTTGGTAGTCAGGGTAA
GGTTGCTGCGGCCGCCAAAGCTGGAGCGGGACACCTAGTAGCAGGAGAAG
GGCTTGTAGGCGAACTGCCCGCGGAAGATTCCTTCGAAAATATGGGAGGA
TGAATGAACATCGTTGCCAACGAAGCAACACTAACAGCTGCAGCTGCAAC
AAGCGAACACCTGCTGGGAGCGGGGGGAACACTGCTGGAGCCACCGCAGG
CGACAGAAGATGGTGTTGGCGATCCCGCCGCCGCCGACAGTGCCGAACCT
GGTGAGGTTGTAAGAGAAAATGCACCCACCAGAGACGAGATCGACGACGC
GCTGGTGGAGGAGGGAGCGGATTCTATGAAAACCGTCGCCATCGACGGCA
ATTCCGCCGAAACCGACCCGCTGCTCCCTGATGGTTCCTTCCTTGGCGGT
CCTGTTGCAATCAGCGGCGACCTTGATGCTCCAGTTGTATCGGATACTTT
GGAACCTGGTGGCGATCTGTCAGACGCCGACCTTAATCCCCGAGTTGTTG
TTGACACCGCACAAGGCCACAATTCCGACGGCGACGACACCTTGAGTTCG
ATGTCAGCTGATGCTGGTCTTCATTCTCCGTCAGCATATACAGAAGTAAC
CGACGCTCCGCAGAACCTGCAAGACATTTGCGGTCCAGGCAACGACAGCA
GTGATACTAATATTGCCGGTGCTGAAGTCGCCGTGGAACCAGAGAGCAGG
GTAGGGGAAGTGGCGACCACACCACTCACAACGGACGACGAAGAAAACAG
CCATCCGAAAAACTCGACATCCACGGGAAGCCAAGGTGTTTTGACGGTGC
TGGAACCTGCCGGTCACGCGTCGGAACCGGTCGAAGGCGTTGCGGTTCAG
GGCGAAGAGGAGGAACCACAGCCTCACCGAGCAGAGGTGGGTGCGGGAGT
GACATCAACTGACAAAGCTGCGGAACGGCAAGACGATGATGATTCGGTAC
AAGAAGAGAGCTTGGTACGAGATGCAGCGGGAGCAGGAACGGAGATCAGT
CCAGGAAACATCGTAGACGGAGATGGAGGGGGCACTGATAGCAGCAGTTT
TGAGGCCTTCGACGATCTGAGTAGCAGTGCGGGAGAAGTCGCCGAAGGCG
AAGGCGCCACGCCCGAGGGTGTTGCTGTCAGGAGAAGTATGGAGGAAGGC
CCTGATACGCCCGGGTTTTCTGTTGGAGAAGAAGCCCTTGGTAGTCAGGG
TAAGGTTGCTGCGGCCGCCAAAGCTGGAGCGGGACACCTAGTAGCAGGAG
AAGGGCTTGTAGGCGAACTGCCCGCGGAAGATTCCTTCGAAAATATGGGA
GGATGA back to top
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