mRNA_L-elsbetiae_contig6626.15354.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6626.15354.1 vs. uniprot
Match: A0A6H5JF78_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF78_9PHAE) HSP 1 Score: 285 bits (729), Expect = 2.280e-81 Identity = 275/495 (55.56%), Postives = 306/495 (61.82%), Query Frame = 2 Query: 41 EDRRKKRLARNRESARLSRRRKKEHLELLEEKISQLTATLEKLKVLQIHGAARELRELKLQCLGELEQNLAAMEASAGPSAPHQQGRQGAAXXXXXXXXXXXXXXXXXXXXXXXXSSLPADMEAMLANGLRQLSMRVGADCRERRVVARHQLDLLEGLAAPAHGRVLMWLAVQDDNFFRARQP---------------SALSTRLVPATISPTSRGGGCSGSASMASMKHESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------RGSLWRLLCRELGLNESQEGQFLRMRRAVAADPRTAAERERLGRLLRVLTDLRVSTEACMGRVHGRAETLMEVLTPSQMVRYLCWVARMGAAAGGDSSSWPSSASLHRLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLTSHALGGDXXXXXXXXXXXVRGERQEVLRLWRKPAEDLSLEEMEWLMRWVRCTQKQGARRQ 1453 ++RR+KRLARNRESAR SRRRKKEHLELLEEKI QLTATLE LKVLQ+H AAR+LRELK Q LG LE++LAAM+AS S XXXXXXXXXXXX S+LPADME LANGLR +S RVGA+C ERR V +QL LLEGLAAP H RVLM LAVQD++ FRARQ SA + ISP S G SG A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +LWRLLC+ELGL +SQEGQFL+++RAVAA P T AER+RL RL RVL LR STEACM H RA TLME+LTPSQ VRYL WVAR G ++ PS SL L + + G D GER EVLRLWRK E+L+LEEMEWL+ WVR Q +RQ Sbjct: 326 DERRQKRLARNRESARQSRRRKKEHLELLEEKIGQLTATLENLKVLQLHDAARQLRELKRQSLGALERHLAAMDASVAASXXXXX----------------XXXXXXXXXXXXSPSTLPADMEDALANGLRHMSGRVGANCGERRAVVSYQLRLLEGLAAPPHARVLMSLAVQDESSFRARQXXXXXXXXXXXXXNLASARPPNIATDIISPGSGRSGGSGDARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSNLWRLLCQELGLTDSQEGQFLQLQRAVAASPPTLAERDRLRRLSRVLAGLRASTEACMADAHARAATLMEILTPSQTVRYLGWVARTAGDHGDAPTAPPSLTSL--LAATATATADTCATTDPPSVAATAARPVPRSPPATLRSGEGRGFDNS-----------GERGEVLRLWRKRNENLTLEEMEWLVLWVRRMQSTRRQRQ 791
BLAST of mRNA_L-elsbetiae_contig6626.15354.1 vs. uniprot
Match: D7FR79_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR79_ECTSI) HSP 1 Score: 233 bits (593), Expect = 4.300e-63 Identity = 242/488 (49.59%), Postives = 269/488 (55.12%), Query Frame = 2 Query: 41 EDRRKKRLARNRESARLSRRRKKEHLELLEEKISQLTATLEKLKVLQIHGAARELRELKLQCLGELEQNLAAMEASAGPSAPHQQGRQGAAXXXXXXXXXXXXXXXXXXXXXXXXSSLPADMEAMLANGLRQLSMRVGADCRERRVVARHQLDLLEGLAAPAHGRVLMWLAVQDDNFFRARQPSALSTRLVPATISPTSRGGGCSGSASMASMKHESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------RGSLWRLLCRELGLNESQEGQFLRMRRAVAADPRTAAERERLGRLLRVLTDLRVSTEACMGRVHGRAETLMEVLTPSQMVRYLCWVARMGAAAGGDSSSWPSSA-SLHRLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLTSHALGGDXXXXXXXXXXXVRGERQEVLRLWRKPAEDLSLEEMEWLMRWVRCTQKQGARRQ 1453 ++RR+KRLARNRESAR SRRRKKEHLELLEEK LGELE++LAAM+AS S+ G GA+ S LPADME LANGLR +S RVGA+C ERR V HQL LLEGLAAP H RVLMWLAVQD++FFRARQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +LWRLLC+ELGL +SQEGQFL+ +RAVAA P T AER+RL RL RVL LR STEACM VH RA TLME+LTPSQ VRYL WVAR GD + P++ SL LL S T + GG GER EVLRLWRK E+L+LEEMEWL+ WVR TQ +RQ Sbjct: 245 DERRQKRLARNRESARQSRRRKKEHLELLEEK-----------------------------SLGELERHLAAMDASVAASS--SGGGDGASSGAPLPSS----------------SPLPADMEDALANGLRHMSGRVGANCGERRAVVSHQLRLLEGLAAPPHTRVLMWLAVQDESFFRARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSNLWRLLCQELGLTDSQEGQFLQFQRAVAASPPTLAERDRLRRLSRVLAGLRASTEACMADVHARAATLMEILTPSQTVRYLGWVAR----TAGDPADCPTTLPSLTSLLA------GAADTCASTDTPSTAATAARPVPRSPPATLRSGGGKGIDNS--------GERGEVLRLWRKRNENLTLEEMEWLVLWVRRTQSTRRQRQ 667
BLAST of mRNA_L-elsbetiae_contig6626.15354.1 vs. uniprot
Match: A0A1V9ZGK4_9STRA (BZIP domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGK4_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 8.820e-15 Identity = 66/201 (32.84%), Postives = 97/201 (48.26%), Query Frame = 2 Query: 2 ISGDSSGLGGD----TQEDRRKKRLARNRESARLSRRRKKEHLELLEEKISQLTATLEKLKVLQIHGAARELRELKLQCLGELEQNLAAMEASAGPSAPHQQGRQGAAXXXXXXXXXXXXXXXXXXXXXXXXSSLPADMEAMLANGLRQLSMRVGADCRERRVVARHQLDLLEGLAAPAHGRVLMWLAVQDDNFFRARQPS 592 G S GGD T +D+R++RLARNRESAR SRRRKK++LELLEEK++QLT ++ + + A + L LK Q + L + LA + A SL ++ L NG++ + R G ERR V + L+ L P + R L+W+++QD++FF QP+ Sbjct: 97 FDGPDSPTGGDNELDTDDDKRQRRLARNRESARQSRRRKKQYLELLEEKVAQLTEEIDATRGEHLESADKTLSTLKTQMVASLYEKLATLPPMA---------------------------------------SLGPELTEELRNGVKLMQERYGPHSEERRAVVNYHFQQLDNLLLPPYTRFLLWMSIQDESFFSKIQPA 258
BLAST of mRNA_L-elsbetiae_contig6626.15354.1 vs. uniprot
Match: A0A7S1TPU8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPU8_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 6.820e-14 Identity = 68/204 (33.33%), Postives = 99/204 (48.53%), Query Frame = 2 Query: 8 GDSSGLGGD--------TQEDRRKKRLARNRESARLSRRRKKEHLELLEEKISQLTATLEKLKVLQIHGAARELRELKLQCLGELEQNLAAMEASAGPSAPHQQGRQGAAXXXXXXXXXXXXXXXXXXXXXXXXSSLPADMEAMLANGLRQLSMRVGADCRERRVVARHQLDLLEGLAAPAHGRVLMWLAVQDDNFFRARQPSA 595 GD+S LGG Q +RR+KRLARNRESAR SRRRKK++LELLEEK+SQLT ++ L+ + + A + + +L+ + +L Q ++ E L D L LR++ + C ER V R Q + L LA P H ++L W+ +Q D+FFR+R+ S+ Sbjct: 69 GDASMLGGAGGNASEELAQVERRQKRLARNRESARQSRRRKKQYLELLEEKVSQLTDEIDALRRMHLESADKAIADLRDNRVRQLAQAVSKTE------------------------------------------KLNEDQMGALDRALREVQSKFSVSCDERLAVIRFQFEELHSLALPLHSQLLTWVLLQPDSFFRSRRSSS 230
BLAST of mRNA_L-elsbetiae_contig6626.15354.1 vs. uniprot
Match: A0A067CWW8_SAPPC (BZIP domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CWW8_SAPPC) HSP 1 Score: 83.2 bits (204), Expect = 3.740e-13 Identity = 64/201 (31.84%), Postives = 97/201 (48.26%), Query Frame = 2 Query: 2 ISGDSSGLGGD----TQEDRRKKRLARNRESARLSRRRKKEHLELLEEKISQLTATLEKLKVLQIHGAARELRELKLQCLGELEQNLAAMEASAGPSAPHQQGRQGAAXXXXXXXXXXXXXXXXXXXXXXXXSSLPADMEAMLANGLRQLSMRVGADCRERRVVARHQLDLLEGLAAPAHGRVLMWLAVQDDNFFRARQPS 592 G S GGD T +D+R++RLARNRESAR SRRRKK++LELLEEK++QLT ++ + + A + L LK Q + L + L+++ A SL ++ L +G++ + R G ERR V + L+ L P + R L+W+++QD+ FF QP+ Sbjct: 96 FDGPDSPTGGDNDLDTDDDKRQRRLARNRESARQSRRRKKQYLELLEEKVAQLTEEIDATRGEHLESADKTLSTLKSQMVASLYEKLSSLPPMA---------------------------------------SLGPELTDELRSGVKIMQERYGPHSEERRAVVNYHFQQLDNLLLPPYTRFLLWMSIQDEAFFSKIQPA 257
BLAST of mRNA_L-elsbetiae_contig6626.15354.1 vs. uniprot
Match: A0A485L6H4_9STRA (Aste57867_16357 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L6H4_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.100e-12 Identity = 67/201 (33.33%), Postives = 97/201 (48.26%), Query Frame = 2 Query: 5 SGDSSGLGGDTQEDRRKKRLARNRESARLSRRRKKEHLELLEEKISQLTATLEKLKVLQIHGAARELRELKLQCLGELEQNLAAMEASAGPSAPHQQGRQGAAXXXXXXXXXXXXXXXXXXXXXXXXSSLPADMEAMLANGLRQLSMRVGADCRERRVVARHQLDLLEGLAAPAHGRVLMWLAVQDDNFFRARQPSALSTR 607 +GD +G T++DRR+KRL RNRESAR SRRRKK++LELLE K+SQLT +E + ++GA L+ LK Q + L +A P P+ Q L A + L N + R G + +ER+ V + L+ L P + R L+W++VQD+ F+ P+ S R Sbjct: 98 TGDDIDVG--TEDDRRRKRLERNRESARQSRRRKKQYLELLEGKVSQLTDEIEAARGEHLNGADSTLKALKAQLVASLFDKIA-------PYPPNVQ--------------------------------LTAGISDELRNTNNLIQERFGPNSQERQAVVNYHFQQLDSLLLPPYTRFLLWMSVQDEAFYAKSAPTPTSKR 257
BLAST of mRNA_L-elsbetiae_contig6626.15354.1 vs. uniprot
Match: A0A024UBM0_9STRA (BZIP domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBM0_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.300e-11 Identity = 64/206 (31.07%), Postives = 102/206 (49.51%), Query Frame = 2 Query: 32 DTQEDRRKKRLARNRESARLSRRRKKEHLELLEEKISQLTATLEKLKVLQIHGAARELRELKLQCLGELEQNLAAMEASAGPSAPHQQGRQGAAXXXXXXXXXXXXXXXXXXXXXXXXSSLPADMEAMLANGLRQLSMRVGADCRERRVVARHQLDLLEGLAAPAHGRVLMWLAVQDDNFF-RARQPSALSTRLVPATISPTSRGG 646 DT++++R+KRL RNR SAR SRRRKK++LELLEEK++QLT ++ ++ + A + + +K Q + L + LA + P+AP LPAD+E L + L R G + ER+ + ++ L+GL P + L+W+++QDD FF R Q + S++ + GG Sbjct: 108 DTEDEKRRKRLERNRISARDSRRRKKQYLELLEEKVAQLTEDIDITRMEHLDTADKTITAVKAQMITSLYEKLAPLP----PNAP-----------------------------------LPADVEDELGQVAQLLKDRYGPNSEERQALIKYHFHQLDGLLLPPYTCFLLWMSLQDDAFFARTLQTPSSSSKKAGEALEQRKDGG 274
BLAST of mRNA_L-elsbetiae_contig6626.15354.1 vs. uniprot
Match: A0A6G0XML1_9STRA (BZIP domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XML1_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.530e-11 Identity = 58/181 (32.04%), Postives = 88/181 (48.62%), Query Frame = 2 Query: 32 DTQEDRRKKRLARNRESARLSRRRKKEHLELLEEKISQLTATLEKLKVLQIHGAARELRELKLQCLGELEQNLAAMEASAGPSAPHQQGRQGAAXXXXXXXXXXXXXXXXXXXXXXXXSSLPADMEAMLANGLRQLSMRVGADCRERRVVARHQLDLLEGLAAPAHGRVLMWLAVQDDNFF 574 DT+E++R+KRL RNR SAR SRRRKK++LELLEEK++QLT L+ + + A ++ LK + L + L S+LP D+EA L +G + + R G +ER V + L L+GL + R L+W++ QD++F+ Sbjct: 108 DTEEEKRRKRLERNRISARDSRRRKKQYLELLEEKVAQLTEDLDVARAERFEAADATIQSLKTDLVTSLYEKL---------------------------------------FVYPPNSALPPDLEAELVDGAQLMKDRYGPHSKERHAVLNYYLTHLDGLLLSPYTRFLLWMSTQDESFY 249
BLAST of mRNA_L-elsbetiae_contig6626.15354.1 vs. uniprot
Match: A0A024UBD7_9STRA (BZIP domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBD7_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.670e-11 Identity = 64/206 (31.07%), Postives = 102/206 (49.51%), Query Frame = 2 Query: 32 DTQEDRRKKRLARNRESARLSRRRKKEHLELLEEKISQLTATLEKLKVLQIHGAARELRELKLQCLGELEQNLAAMEASAGPSAPHQQGRQGAAXXXXXXXXXXXXXXXXXXXXXXXXSSLPADMEAMLANGLRQLSMRVGADCRERRVVARHQLDLLEGLAAPAHGRVLMWLAVQDDNFF-RARQPSALSTRLVPATISPTSRGG 646 DT++++R+KRL RNR SAR SRRRKK++LELLEEK++QLT ++ ++ + A + + +K Q + L + LA + P+AP LPAD+E L + L R G + ER+ + ++ L+GL P + L+W+++QDD FF R Q + S++ + GG Sbjct: 108 DTEDEKRRKRLERNRISARDSRRRKKQYLELLEEKVAQLTEDIDITRMEHLDTADKTITAVKAQMITSLYEKLAPLP----PNAP-----------------------------------LPADVEDELGQVAQLLKDRYGPNSEERQALIKYHFHQLDGLLLPPYTCFLLWMSLQDDAFFARTLQTPSSSSKKAGEALEQRKDGG 274
BLAST of mRNA_L-elsbetiae_contig6626.15354.1 vs. uniprot
Match: W4G042_9STRA (BZIP domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G042_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.670e-11 Identity = 63/195 (32.31%), Postives = 94/195 (48.21%), Query Frame = 2 Query: 2 ISGDSSGLGGD----TQEDRRKKRLARNRESARLSRRRKKEHLELLEEKISQLTATLEKLKVLQIHGAARELRELKLQCLGELEQNLAAMEASAGPSAPHQQGRQGAAXXXXXXXXXXXXXXXXXXXXXXXXSSLPADMEAMLANGLRQLSMRVGADCRERRVVARHQLDLLEGLAAPAHGRVLMWLAVQDDNFF 574 + G S GGD T E RR+KRL RNRESAR SRRRKK++LELLE K++QLT +++ + + A + LK Q + L + L + PSAP LP+ +E L G+ + R G + +ER+ V + L+ L P + R L+W+++QD+ F+ Sbjct: 77 LDGPESPTGGDNEQGTDEGRRRKRLERNRESARQSRRRKKQYLELLEGKVAQLTDEIDEAREEHLDSADSTINALKNQLVTSLNKLL----DNHPPSAP-----------------------------------LPSPLEDELREGVYSIQTRFGPNAKERQAVVNYHFTQLDSLLLPPYTRFLLWMSIQDEVFY 232 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6626.15354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6626.15354.1 >prot_L-elsbetiae_contig6626.15354.1 ID=prot_L-elsbetiae_contig6626.15354.1|Name=mRNA_L-elsbetiae_contig6626.15354.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=422bp MEASAGPSAPHQQGRQGAAVSAAAAAAAAASDVGGVTPASSSSSSLPADMback to top mRNA from alignment at L-elsbetiae_contig6626:1697..9238+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6626.15354.1 ID=mRNA_L-elsbetiae_contig6626.15354.1|Name=mRNA_L-elsbetiae_contig6626.15354.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7542bp|location=Sequence derived from alignment at L-elsbetiae_contig6626:1697..9238+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6626:1697..9238+ >mRNA_L-elsbetiae_contig6626.15354.1 ID=mRNA_L-elsbetiae_contig6626.15354.1|Name=mRNA_L-elsbetiae_contig6626.15354.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2532bp|location=Sequence derived from alignment at L-elsbetiae_contig6626:1697..9238+ (Laminarionema elsbetiae ELsaHSoW15)back to top |