prot_L-elsbetiae_contig6626.15354.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6626.15354.1
Unique Nameprot_L-elsbetiae_contig6626.15354.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length422
Homology
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BLAST of mRNA_L-elsbetiae_contig6626.15354.1 vs. uniprot
Match: A0A6H5JF78_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF78_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 4.120e-54
Identity = 200/379 (52.77%), Postives = 223/379 (58.84%), Query Frame = 0 
Query:   45 SLPADMEAMLANGLRQLSMRVGADCRERRVVARHQLDLLEGLAAPAHGRVLMWLAVQDDNFFRARQP---------------SALSTRLVPATISPTSRGGGCSGSASMASMKHESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------RGSLWRLLCRELGLNESQEGQFLRMRRAVAADPRTAAERERLGRLLRVLTDLRVSTEACMGRVHGRAETLMEVLTPSQMVRYLCWVARMGAAAGGDSSSWPSSASLHRLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLTSHALGGDXXXXXXXXXXXVRGERQEVLRLWRKPAEDLSLEEMEWLMRWVRCTQKQGARRQ 399
            +LPADME  LANGLR +S RVGA+C ERR V  +QL LLEGLAAP H RVLM LAVQD++ FRARQ                SA    +    ISP S   G SG A          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           +LWRLLC+ELGL +SQEGQFL+++RAVAA P T AER+RL RL RVL  LR STEACM   H RA TLME+LTPSQ VRYL WVAR     G   ++ PS  SL  L                                +   +    G D             GER EVLRLWRK  E+L+LEEMEWL+ WVR  Q    +RQ
Sbjct:  426 TLPADMEDALANGLRHMSGRVGANCGERRAVVSYQLRLLEGLAAPPHARVLMSLAVQDESSFRARQXXXXXXXXXXXXXNLASARPPNIATDIISPGSGRSGGSGDARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSNLWRLLCQELGLTDSQEGQFLQLQRAVAASPPTLAERDRLRRLSRVLAGLRASTEACMADAHARAATLMEILTPSQTVRYLGWVARTAGDHGDAPTAPPSLTSL--LAATATATADTCATTDPPSVAATAARPVPRSPPATLRSGEGRGFDNS-----------GERGEVLRLWRKRNENLTLEEMEWLVLWVRRMQSTRRQRQ 791
[Close]
BLAST of mRNA_L-elsbetiae_contig6626.15354.1 vs. uniprot
Match: D7FR79_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR79_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 1.310e-53
Identity = 198/371 (53.37%), Postives = 217/371 (58.49%), Query Frame = 0 
Query:   46 LPADMEAMLANGLRQLSMRVGADCRERRVVARHQLDLLEGLAAPAHGRVLMWLAVQDDNFFRARQPSALSTRLVPATISPTSRGGGCSGSASMASMKHESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------RGSLWRLLCRELGLNESQEGQFLRMRRAVAADPRTAAERERLGRLLRVLTDLRVSTEACMGRVHGRAETLMEVLTPSQMVRYLCWVARMGAAAGGDSSSWPSSA-SLHRLLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLTSHALGGDXXXXXXXXXXXVRGERQEVLRLWRKPAEDLSLEEMEWLMRWVRCTQKQGARRQ 399
            LPADME  LANGLR +S RVGA+C ERR V  HQL LLEGLAAP H RVLMWLAVQD++FFRARQ                                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  +LWRLLC+ELGL +SQEGQFL+ +RAVAA P T AER+RL RL RVL  LR STEACM  VH RA TLME+LTPSQ VRYL WVAR      GD +  P++  SL  LL                               S   T  + GG              GER EVLRLWRK  E+L+LEEMEWL+ WVR TQ    +RQ
Sbjct:  315 LPADMEDALANGLRHMSGRVGANCGERRAVVSHQLRLLEGLAAPPHTRVLMWLAVQDESFFRARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSNLWRLLCQELGLTDSQEGQFLQFQRAVAASPPTLAERDRLRRLSRVLAGLRASTEACMADVHARAATLMEILTPSQTVRYLGWVAR----TAGDPADCPTTLPSLTSLLA------GAADTCASTDTPSTAATAARPVPRSPPATLRSGGGKGIDNS--------GERGEVLRLWRKRNENLTLEEMEWLVLWVRRTQSTRRQRQ 667
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6626.15354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JF78_9PHAE4.120e-5452.77BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FR79_ECTSI1.310e-5353.37BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 304..421
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 304..421

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6626contigL-elsbetiae_contig6626:4512..8559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6626.15354.1mRNA_L-elsbetiae_contig6626.15354.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6626 1697..9238 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6626.15354.1 ID=prot_L-elsbetiae_contig6626.15354.1|Name=mRNA_L-elsbetiae_contig6626.15354.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=422bp
MEASAGPSAPHQQGRQGAAVSAAAAAAAAASDVGGVTPASSSSSSLPADM
EAMLANGLRQLSMRVGADCRERRVVARHQLDLLEGLAAPAHGRVLMWLAV
QDDNFFRARQPSALSTRLVPATISPTSRGGGCSGSASMASMKHESAESGG
GGSGGVSPSSAPGSAAATTAAVAATAGDDAGVGGSGSVGGGGGRGSLWRL
LCRELGLNESQEGQFLRMRRAVAADPRTAAERERLGRLLRVLTDLRVSTE
ACMGRVHGRAETLMEVLTPSQMVRYLCWVARMGAAAGGDSSSWPSSASLH
RLLVETAAAAAAPLPGTVPAAAAAGVATRPPAPPSNSLTSHALGGDGDGG
GGGGGGGVRGERQEVLRLWRKPAEDLSLEEMEWLMRWVRCTQKQGARRQQ
QQQQQQQQQQGQHQRQQQHQQ*
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