mRNA_L-elsbetiae_contig6566.15268.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: D7G1U6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U6_ECTSI) HSP 1 Score: 339 bits (870), Expect = 1.560e-117 Identity = 177/184 (96.20%), Postives = 180/184 (97.83%), Query Frame = 1 Query: 1 MSALEEKSQAADAPAADESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 552 MSALEEKSQAADAP ADE+ED RSVHLVSQEGESFDIKV+VAKMSNLVKTMIDE+ EEDGDAQEIPLPNVKASVLSKVIEFC HYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA Sbjct: 1 MSALEEKSQAADAP-ADETEDTRSVHLVSQEGESFDIKVSVAKMSNLVKTMIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 183
BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: A0A836CN28_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN28_9STRA) HSP 1 Score: 283 bits (724), Expect = 2.690e-95 Identity = 141/172 (81.98%), Postives = 158/172 (91.86%), Query Frame = 1 Query: 37 APAADESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 552 A AA +E+ R+VHLVSQEG+SFD+ V VAKMS LVKTM+DEE+EED +AQEIPLPNVK+SVL+KVIEFC+HY EDPMNEIEKPLKSANM +VVQ W+A +V+V+QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A Sbjct: 11 AEAAPTAEETRTVHLVSQEGDSFDVSVKVAKMSELVKTMLDEELEEDAEAQEIPLPNVKSSVLTKVIEFCRHYVEDPMNEIEKPLKSANMQEVVQNWFATYVQVEQEVLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 182
BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: A0A835Z9K0_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K0_9STRA) HSP 1 Score: 278 bits (712), Expect = 2.140e-93 Identity = 141/184 (76.63%), Postives = 163/184 (88.59%), Query Frame = 1 Query: 28 AADAPAAD---------ESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 552 AA APAA+ ++ED R+V+LVSQEG+SFD+ + VAKMS LVKTMID++ +ED +AQEIPLPNVK+SVL+K+IEFC+HY EDPMNEIEKPLKSANM +VVQ+W+A FV+V+QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A Sbjct: 4 AAAAPAAEAAPAAATETQAEDTRTVNLVSQEGDSFDVSIKVAKMSELVKTMIDDDADEDAEAQEIPLPNVKSSVLTKIIEFCRHYIEDPMNEIEKPLKSANMQEVVQDWFANFVQVEQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 187
BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: A0A7S3HQT9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQT9_9STRA) HSP 1 Score: 269 bits (687), Expect = 7.190e-90 Identity = 133/167 (79.64%), Postives = 153/167 (91.62%), Query Frame = 1 Query: 52 ESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 552 E++DNR++HLVSQEGE FD+ ++V KMS LVKTMIDE+ E+ +AQEIPLPNVK+++LSKVIEF KHYKE+PMNEIEKPLKSANM +VVQEWY+ F+ V QE LFELILAANYMDIKPLLDLTCATVASMIKGK+ E+IRKTFNIVNDFTPEEEAQVREENKWCE+A Sbjct: 3 EADDNRTIHLVSQEGECFDVPISVGKMSELVKTMIDEDQNEE-EAQEIPLPNVKSAILSKVIEFTKHYKEEPMNEIEKPLKSANMAEVVQEWYSNFIAVDQEILFELILAANYMDIKPLLDLTCATVASMIKGKSPEDIRKTFNIVNDFTPEEEAQVREENKWCEEA 168
BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: A0A7S2BM50_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BM50_9STRA) HSP 1 Score: 269 bits (687), Expect = 1.200e-89 Identity = 137/184 (74.46%), Postives = 159/184 (86.41%), Query Frame = 1 Query: 1 MSALEEKSQAADAPAADESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 552 M+A + + + D P ADE +D + V LVSQEG++F ++ VAKMS LVKTMI EE + + D QEIPLPNVK+ +L KV+EFCKHY E+PMNEIEKPLKS+NMH+VVQEWYA +VEV+QETLFELILAANYMDIKPLLDLTCATVASMIKGKT E+IRKTFNIVNDFTPEEEAQVREENKWCE+A Sbjct: 1 MAAEQTEDKKIDEPEADE-DDGKMVDLVSQEGDNFQVEKRVAKMSELVKTMIPEEEDGETDQQEIPLPNVKSQILGKVMEFCKHYCEEPMNEIEKPLKSSNMHEVVQEWYANYVEVEQETLFELILAANYMDIKPLLDLTCATVASMIKGKTPEDIRKTFNIVNDFTPEEEAQVREENKWCEEA 183
BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: A0A7S2SQM9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQM9_9STRA) HSP 1 Score: 266 bits (681), Expect = 9.500e-89 Identity = 140/184 (76.09%), Postives = 158/184 (85.87%), Query Frame = 1 Query: 1 MSALEEKSQAADAPAADESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 552 M+A EEK+ AD A+E ED +V LVSQEG++F ++ VAKMS LVKTM+ +E E D + QEIPLPNVK+SVL KVIEFC+HYKEDPM EIEKPLKS+ M +VVQEWYA FV+V+QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A Sbjct: 1 MAAAEEKN-GADPMVAEEEEDEGNVQLVSQEGDNFQVEAKVAKMSELVKTMLPDEDEGD-EVQEIPLPNVKSSVLGKVIEFCRHYKEDPMTEIEKPLKSSTMSEVVQEWYATFVDVEQEVLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 182
BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: A0A7S3JW81_9STRA (Hypothetical protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=A0A7S3JW81_9STRA) HSP 1 Score: 268 bits (685), Expect = 3.220e-88 Identity = 136/168 (80.95%), Postives = 151/168 (89.88%), Query Frame = 1 Query: 52 ESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGD-AQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 552 E +D+R V+L+SQEG+ F+++V VAKMS LVKTMI EE +ED D AQEIPLPNVK+ VLSKVIEFC+ Y DPM EIEKPLKSANMH+VVQEWYAK+V+V QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A Sbjct: 93 EEDDSRRVNLMSQEGDQFEVEVAVAKMSELVKTMIPEEADEDDDQAQEIPLPNVKSHVLSKVIEFCRQYVNDPMAEIEKPLKSANMHEVVQEWYAKYVDVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 260
BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: F0XYF9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYF9_AURAN) HSP 1 Score: 259 bits (661), Expect = 4.520e-86 Identity = 127/157 (80.89%), Postives = 144/157 (91.72%), Query Frame = 1 Query: 82 VSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 552 +SQEG+ F+++V VAKMS LVKTMI EE +E+ +AQEIPLPNVK+ VL+KVIEFC+ Y E+PM+EIEKPLKSANMH+VVQEWYA +V+V QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A Sbjct: 1 MSQEGDQFEVEVKVAKMSELVKTMIPEEADEEEEAQEIPLPNVKSHVLAKVIEFCRRYAEEPMSEIEKPLKSANMHEVVQEWYANYVDVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 157
BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: A0A7S2DNG6_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNG6_9STRA) HSP 1 Score: 260 bits (664), Expect = 1.010e-85 Identity = 131/168 (77.98%), Postives = 148/168 (88.10%), Query Frame = 1 Query: 49 DESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 552 D +D + V LVSQEG++F ++ VAKMS LVKTMI E+ EE D QEIPLPNVK+++L KVIEFCKH+ +PM+EIEKPLKS+NMH+VVQEWYA +VEV QETLFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A Sbjct: 46 DAEDDGKHVDLVSQEGDNFQVEKKVAKMSELVKTMIPED-EEGEDQQEIPLPNVKSAILGKVIEFCKHHANEPMSEIEKPLKSSNMHEVVQEWYANYVEVDQETLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 212
BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: A0A4D9D5I6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5I6_9STRA) HSP 1 Score: 256 bits (653), Expect = 1.370e-84 Identity = 125/163 (76.69%), Postives = 145/163 (88.96%), Query Frame = 1 Query: 58 EDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCE 546 E + VHLVSQEG+ ++++V+V KMS LVKTM+ ++ ++ + QEIPLPNVK +VL+KVIEFCKH+KEDPMN+IEKPLKSANMH+VVQ+WYA FV V QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIR+TFNI NDFTPEEEAQVREENKWCE Sbjct: 9 ESGKVVHLVSQEGDQYEVEVSVCKMSELVKTMLPDD-DDSSETQEIPLPNVKNNVLAKVIEFCKHHKEDPMNDIEKPLKSANMHEVVQDWYANFVNVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRRTFNITNDFTPEEEAQVREENKWCE 170 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6566.15268.1 >prot_L-elsbetiae_contig6566.15268.1 ID=prot_L-elsbetiae_contig6566.15268.1|Name=mRNA_L-elsbetiae_contig6566.15268.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp MSALEEKSQAADAPAADESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTback to top mRNA from alignment at L-elsbetiae_contig6566:2938..6729- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6566.15268.1 ID=mRNA_L-elsbetiae_contig6566.15268.1|Name=mRNA_L-elsbetiae_contig6566.15268.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3792bp|location=Sequence derived from alignment at L-elsbetiae_contig6566:2938..6729- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6566:2938..6729- >mRNA_L-elsbetiae_contig6566.15268.1 ID=mRNA_L-elsbetiae_contig6566.15268.1|Name=mRNA_L-elsbetiae_contig6566.15268.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1110bp|location=Sequence derived from alignment at L-elsbetiae_contig6566:2938..6729- (Laminarionema elsbetiae ELsaHSoW15)back to top |