prot_L-elsbetiae_contig6566.15268.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig6566.15268.1
Unique Name	prot_L-elsbetiae_contig6566.15268.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	185

Homology

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BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: D7G1U6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U6_ECTSI)

HSP 1 Score: 339 bits (870), Expect = 1.560e-117
Identity = 177/184 (96.20%), Postives = 180/184 (97.83%), Query Frame = 0

Query:    1 MSALEEKSQAADAPAADESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            MSALEEKSQAADAP ADE+ED RSVHLVSQEGESFDIKV+VAKMSNLVKTMIDE+ EEDGDAQEIPLPNVKASVLSKVIEFC HYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA
Sbjct:    1 MSALEEKSQAADAP-ADETEDTRSVHLVSQEGESFDIKVSVAKMSNLVKTMIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 183

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BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: A0A836CN28_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN28_9STRA)

HSP 1 Score: 283 bits (724), Expect = 2.690e-95
Identity = 141/172 (81.98%), Postives = 158/172 (91.86%), Query Frame = 0

Query:   13 APAADESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            A AA  +E+ R+VHLVSQEG+SFD+ V VAKMS LVKTM+DEE+EED +AQEIPLPNVK+SVL+KVIEFC+HY EDPMNEIEKPLKSANM +VVQ W+A +V+V+QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:   11 AEAAPTAEETRTVHLVSQEGDSFDVSVKVAKMSELVKTMLDEELEEDAEAQEIPLPNVKSSVLTKVIEFCRHYVEDPMNEIEKPLKSANMQEVVQNWFATYVQVEQEVLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 182

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BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: A0A835Z9K0_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K0_9STRA)

HSP 1 Score: 278 bits (712), Expect = 2.140e-93
Identity = 141/184 (76.63%), Postives = 163/184 (88.59%), Query Frame = 0

Query:   10 AADAPAAD---------ESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            AA APAA+         ++ED R+V+LVSQEG+SFD+ + VAKMS LVKTMID++ +ED +AQEIPLPNVK+SVL+K+IEFC+HY EDPMNEIEKPLKSANM +VVQ+W+A FV+V+QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    4 AAAAPAAEAAPAAATETQAEDTRTVNLVSQEGDSFDVSIKVAKMSELVKTMIDDDADEDAEAQEIPLPNVKSSVLTKIIEFCRHYIEDPMNEIEKPLKSANMQEVVQDWFANFVQVEQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 187

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BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: A0A7S3HQT9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQT9_9STRA)

HSP 1 Score: 269 bits (687), Expect = 7.190e-90
Identity = 133/167 (79.64%), Postives = 153/167 (91.62%), Query Frame = 0

Query:   18 ESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            E++DNR++HLVSQEGE FD+ ++V KMS LVKTMIDE+  E+ +AQEIPLPNVK+++LSKVIEF KHYKE+PMNEIEKPLKSANM +VVQEWY+ F+ V QE LFELILAANYMDIKPLLDLTCATVASMIKGK+ E+IRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    3 EADDNRTIHLVSQEGECFDVPISVGKMSELVKTMIDEDQNEE-EAQEIPLPNVKSAILSKVIEFTKHYKEEPMNEIEKPLKSANMAEVVQEWYSNFIAVDQEILFELILAANYMDIKPLLDLTCATVASMIKGKSPEDIRKTFNIVNDFTPEEEAQVREENKWCEEA 168

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BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: A0A7S2BM50_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BM50_9STRA)

HSP 1 Score: 269 bits (687), Expect = 1.200e-89
Identity = 137/184 (74.46%), Postives = 159/184 (86.41%), Query Frame = 0

Query:    1 MSALEEKSQAADAPAADESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            M+A + + +  D P ADE +D + V LVSQEG++F ++  VAKMS LVKTMI EE + + D QEIPLPNVK+ +L KV+EFCKHY E+PMNEIEKPLKS+NMH+VVQEWYA +VEV+QETLFELILAANYMDIKPLLDLTCATVASMIKGKT E+IRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    1 MAAEQTEDKKIDEPEADE-DDGKMVDLVSQEGDNFQVEKRVAKMSELVKTMIPEEEDGETDQQEIPLPNVKSQILGKVMEFCKHYCEEPMNEIEKPLKSSNMHEVVQEWYANYVEVEQETLFELILAANYMDIKPLLDLTCATVASMIKGKTPEDIRKTFNIVNDFTPEEEAQVREENKWCEEA 183

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BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: A0A7S2SQM9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQM9_9STRA)

HSP 1 Score: 266 bits (681), Expect = 9.500e-89
Identity = 140/184 (76.09%), Postives = 158/184 (85.87%), Query Frame = 0

Query:    1 MSALEEKSQAADAPAADESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            M+A EEK+  AD   A+E ED  +V LVSQEG++F ++  VAKMS LVKTM+ +E E D + QEIPLPNVK+SVL KVIEFC+HYKEDPM EIEKPLKS+ M +VVQEWYA FV+V+QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    1 MAAAEEKN-GADPMVAEEEEDEGNVQLVSQEGDNFQVEAKVAKMSELVKTMLPDEDEGD-EVQEIPLPNVKSSVLGKVIEFCRHYKEDPMTEIEKPLKSSTMSEVVQEWYATFVDVEQEVLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 182

[Close]

BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: A0A7S3JW81_9STRA (Hypothetical protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=A0A7S3JW81_9STRA)

HSP 1 Score: 268 bits (685), Expect = 3.220e-88
Identity = 136/168 (80.95%), Postives = 151/168 (89.88%), Query Frame = 0

Query:   18 ESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGD-AQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            E +D+R V+L+SQEG+ F+++V VAKMS LVKTMI EE +ED D AQEIPLPNVK+ VLSKVIEFC+ Y  DPM EIEKPLKSANMH+VVQEWYAK+V+V QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:   93 EEDDSRRVNLMSQEGDQFEVEVAVAKMSELVKTMIPEEADEDDDQAQEIPLPNVKSHVLSKVIEFCRQYVNDPMAEIEKPLKSANMHEVVQEWYAKYVDVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 260

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BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: F0XYF9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYF9_AURAN)

HSP 1 Score: 259 bits (661), Expect = 4.520e-86
Identity = 127/157 (80.89%), Postives = 144/157 (91.72%), Query Frame = 0

Query:   28 VSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            +SQEG+ F+++V VAKMS LVKTMI EE +E+ +AQEIPLPNVK+ VL+KVIEFC+ Y E+PM+EIEKPLKSANMH+VVQEWYA +V+V QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    1 MSQEGDQFEVEVKVAKMSELVKTMIPEEADEEEEAQEIPLPNVKSHVLAKVIEFCRRYAEEPMSEIEKPLKSANMHEVVQEWYANYVDVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 157

[Close]

BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: A0A7S2DNG6_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNG6_9STRA)

HSP 1 Score: 260 bits (664), Expect = 1.010e-85
Identity = 131/168 (77.98%), Postives = 148/168 (88.10%), Query Frame = 0

Query:   17 DESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            D  +D + V LVSQEG++F ++  VAKMS LVKTMI E+ EE  D QEIPLPNVK+++L KVIEFCKH+  +PM+EIEKPLKS+NMH+VVQEWYA +VEV QETLFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:   46 DAEDDGKHVDLVSQEGDNFQVEKKVAKMSELVKTMIPED-EEGEDQQEIPLPNVKSAILGKVIEFCKHHANEPMSEIEKPLKSSNMHEVVQEWYANYVEVDQETLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 212

[Close]

BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Match: A0A4D9D5I6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5I6_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.370e-84
Identity = 125/163 (76.69%), Postives = 145/163 (88.96%), Query Frame = 0

Query:   20 EDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCE 182
            E  + VHLVSQEG+ ++++V+V KMS LVKTM+ ++ ++  + QEIPLPNVK +VL+KVIEFCKH+KEDPMN+IEKPLKSANMH+VVQ+WYA FV V QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIR+TFNI NDFTPEEEAQVREENKWCE
Sbjct:    9 ESGKVVHLVSQEGDQYEVEVSVCKMSELVKTMLPDD-DDSSETQEIPLPNVKNNVLAKVIEFCKHHKEDPMNDIEKPLKSANMHEVVQDWYANFVNVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRRTFNITNDFTPEEEAQVREENKWCE 170

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig6566.15268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G1U6_ECTSI	1.560e-117	96.20	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836CN28_9STRA	2.690e-95	81.98	Skp1 family, dimerization domain-containing protei...	[more]
A0A835Z9K0_9STRA	2.140e-93	76.63	Skp1 family, dimerization domain-containing protei...	[more]
A0A7S3HQT9_9STRA	7.190e-90	79.64	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A7S2BM50_9STRA	1.200e-89	74.46	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A7S2SQM9_9STRA	9.500e-89	76.09	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S3JW81_9STRA	3.220e-88	80.95	Hypothetical protein n=3 Tax=Pelagomonadales TaxID...	[more]
F0XYF9_AURAN	4.520e-86	80.89	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A7S2DNG6_9STRA	1.010e-85	77.98	Hypothetical protein n=2 Tax=Dictyocha speculum Ta...	[more]
A0A4D9D5I6_9STRA	1.370e-84	76.69	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001232	S-phase kinase-associated protein 1-like	SMART	SM00512	skp1_3	coord: 22..133 e-value: 1.5E-27 score: 107.6
IPR016072	SKP1 component, dimerisation	PFAM	PF01466	Skp1	coord: 134..181 e-value: 7.4E-28 score: 96.4
IPR016897	S-phase kinase-associated protein 1	PIRSF	PIRSF028729	SCF_Skp	coord: 3..184 e-value: 3.3E-60 score: 200.6
IPR016073	SKP1 component, POZ domain	PFAM	PF03931	Skp1_POZ	coord: 24..86 e-value: 2.4E-18 score: 66.1
None	No IPR available	GENE3D	3.30.710.10		coord: 18..184 e-value: 7.7E-65 score: 219.8
None	No IPR available	PANTHER	PTHR11165:SF120	S-PHASE KINASE-ASSOCIATED PROTEIN 1	coord: 24..183
None	No IPR available	PANTHER	PTHR11165	SKP1	coord: 24..183
IPR036296	SKP1-like, dimerisation domain superfamily	SUPERFAMILY	81382	Skp1 dimerisation domain-like	coord: 107..181
IPR011333	SKP1/BTB/POZ domain superfamily	SUPERFAMILY	54695	POZ domain	coord: 24..89

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig6566	contig	L-elsbetiae_contig6566:2938..6729 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig6566.15268.1	mRNA_L-elsbetiae_contig6566.15268.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig6566 2938..6729 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig6566.15268.1 ID=prot_L-elsbetiae_contig6566.15268.1|Name=mRNA_L-elsbetiae_contig6566.15268.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp
MSALEEKSQAADAPAADESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKT
MIDEEVEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSA
NMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKG
KTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001232	SKP1-like
IPR016072	Skp1_comp_dimer
IPR016897	SKP1
IPR016073	Skp1_comp_POZ
IPR036296	SKP1-like_dim_sf
IPR011333	SKP1/BTB/POZ_sf