mRNA_L-elsbetiae_contig6445.15118.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6445.15118.1
Unique NamemRNA_L-elsbetiae_contig6445.15118.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6445.15118.1 vs. uniprot
Match: D7FKU4_ECTSI (Chlorophyll binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU4_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 1.180e-124
Identity = 180/211 (85.31%), Postives = 195/211 (92.42%), Query Frame = 1
Query:   37 MKCIAMLLAACA-GAQAFVAPSAFNGAALTTRARTSSAMKMNFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRICMLAILGHLTQENVRLPGLLNFETPFADVPNGLGAISKMGGFGVAQIVVFIGFLELFVMKQKEGSFPGDMSRINPFEKQWESFSEETKLQKRAIELNNGRAAQMGIFGMVVHEIMSNQPYIINDILGE 666
            MKC   +LAACA GA AFVAPSAFNGAA+ TRA++SSAMKM+FENELGAQ PLGFWDPLYWLE+ADQERFDRLRYVEIKHGRICMLAILGH+TQENVRLPG LNFETPFAD+PNGL AISKMG FGVAQIV FIGFLELFVMKQKEGSFPGDMSRINPFEKQWESF EETKL+KRAIELNNGRAAQMGIF +V+HEI+  +PYIIN I+G+
Sbjct:    1 MKCTIAMLAACAAGANAFVAPSAFNGAAVATRAQSSSAMKMSFENELGAQPPLGFWDPLYWLEDADQERFDRLRYVEIKHGRICMLAILGHITQENVRLPGNLNFETPFADMPNGLTAISKMGPFGVAQIVAFIGFLELFVMKQKEGSFPGDMSRINPFEKQWESFDEETKLRKRAIELNNGRAAQMGIFALVIHEILDGEPYIINKIVGD 211          
BLAST of mRNA_L-elsbetiae_contig6445.15118.1 vs. uniprot
Match: Q9FEP5_SACLA (Light harvesting protein lhcf3 (Fragment) n=1 Tax=Saccharina latissima TaxID=309358 RepID=Q9FEP5_SACLA)

HSP 1 Score: 336 bits (861), Expect = 6.870e-114
Identity = 159/196 (81.12%), Postives = 183/196 (93.37%), Query Frame = 1
Query:  100 AFNGAALTTRARTSSAMKMNFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRICMLAILGHLTQENVRLPGLLNF--ETPFADVPNGLGAISKMGGFGVAQIVVFIGFLELFVMKQKEGSFPGDMSRINPFEKQWESFSEETKLQKRAIELNNGRAAQMGIFGMVVHEIMSNQPYIINDILGE-KWLA 678
            AFNGA++ TRA+TSSAMKM+FENELG QAPLG+WDPLYWLENADQERFDRLRYVEIKHGRICMLAILGH+ QENVRLPG+L+F  +  FAD+PNGLGA+SKMG  GVAQIV+FIGFLE+FVMKQKEGSFPGDMSR+NPFEKQW+SF EETKL+KRAIELNNGRAAQMGIFG++VHE+++NQPY+IN++LGE  W A
Sbjct:    1 AFNGASMATRAKTSSAMKMSFENELGVQAPLGYWDPLYWLENADQERFDRLRYVEIKHGRICMLAILGHIVQENVRLPGMLSFSNDQSFADMPNGLGALSKMGPIGVAQIVIFIGFLEVFVMKQKEGSFPGDMSRVNPFEKQWDSFDEETKLRKRAIELNNGRAAQMGIFGLIVHEVINNQPYVINNLLGELSWAA 196          
BLAST of mRNA_L-elsbetiae_contig6445.15118.1 vs. uniprot
Match: A0A6H5KCX6_9PHAE (LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5KCX6_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 1.140e-88
Identity = 140/215 (65.12%), Postives = 169/215 (78.60%), Query Frame = 1
Query:   37 MKCIAMLLAACAGAQAFVAPSAFNGAALTTRARTSSAMKMNFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRICMLAILGHLTQENVRLPGLLNFET--PFADVPNGLGAISKMGGFGVAQIVVFIGFLELFVMKQKEGSFPGDMSRI-NPFEKQWESFSEETKLQKRAIELNNGRAAQMGIFGMVVHEIMSNQPYIINDILGEKW 672
            MK   M LA  A A AFVAPSAFNGAA+ T A++SSAMKM+FE+E+GAQ PLGFWDPL  L +ADQERF+RLRYVE+KHGRI MLAI GHLTQ+NVRLPG+L+      FAD+PNG+ A+SK+   G+AQI  F+GFLEL VMK  EGSFPGD +   NPF   W++ SEET+  KRAIELNNGRAAQMGI  ++VHE ++N+PYIIND+LG  +
Sbjct:    1 MKSACMALACAASANAFVAPSAFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYIINDLLGASY 215          
BLAST of mRNA_L-elsbetiae_contig6445.15118.1 vs. uniprot
Match: FCPF_MACPY (Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic (Fragment) n=1 Tax=Macrocystis pyrifera TaxID=35122 RepID=FCPF_MACPY)

HSP 1 Score: 266 bits (679), Expect = 4.830e-86
Identity = 138/206 (66.99%), Postives = 162/206 (78.64%), Query Frame = 1
Query:   64 ACAGAQAFVAPSAFNGAALTTRARTSSAMKMNFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRICMLAILGHLTQENVRLPGLLNFET--PFADVPNGLGAISKMGGFGVAQIVVFIGFLELFVMKQKEGSFPGD-MSRINPFEKQWESFSEETKLQKRAIELNNGRAAQMGIFGMVVHEIMSNQPYIINDILGEKW 672
            ACA A     PSAFNGAAL+T A++SSAMKM+FE+E+GAQAPLGFWDPL  L +ADQERF+RLRYVE+KHGRI MLAI GHLTQ+N RLPG+L+      FAD+PNG+ A+SK+   G+AQI  FIGFLEL VMK  EGSFPGD +   NPF   W+S S ET+  KRAIELNNGRAAQMGI GM+VHE +SNQPYI ND+LG  +
Sbjct:    3 ACAAAPGLRGPSAFNGAALSTPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFIIGGNPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPYITNDLLGASY 208          
BLAST of mRNA_L-elsbetiae_contig6445.15118.1 vs. uniprot
Match: FCPB_MACPY (Fucoxanthin-chlorophyll a-c binding protein B, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPB_MACPY)

HSP 1 Score: 266 bits (679), Expect = 5.910e-86
Identity = 135/211 (63.98%), Postives = 165/211 (78.20%), Query Frame = 1
Query:   49 AMLLAACAGAQAFVAPSAFNGAALTTRARTSSAMKMNFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRICMLAILGHLTQENVRLPGLLNFET--PFADVPNGLGAISKMGGFGVAQIVVFIGFLELFVMKQKEGSFPGDMSRI-NPFEKQWESFSEETKLQKRAIELNNGRAAQMGIFGMVVHEIMSNQPYIINDILGEKW 672
            A++  ACA A  F  PSAFNGAALTT A+  SAMKM+FE+E+GAQAPLGFWDPL  L +ADQERF+RLRYVE+KHGRI MLAI GHLTQ+N RLPG+L+      FAD+PNG+ A+SK+   G+AQI  FIGFLEL VMK  EGSFPGD +   NPF   W++ SEET+  KRAIELNNGRAAQMGI  ++VHE ++N+PY+IND++G  +
Sbjct:    4 AVMAVACAAAPGFRGPSAFNGAALTTSAKACSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGASWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLVGASY 214          
BLAST of mRNA_L-elsbetiae_contig6445.15118.1 vs. uniprot
Match: D7FIR0_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIR0_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 1.400e-85
Identity = 138/207 (66.67%), Postives = 166/207 (80.19%), Query Frame = 1
Query:   58 LAACAG-AQAFVAPSAFNGAALTTRARTSSAMKMNFENELGAQAPLGFWDPLYWL-ENADQERFDRLRYVEIKHGRICMLAILGHLTQENVRLPGLL--NFETPFADVPNGLGAISKMGGFGVAQIVVFIGFLELFVMKQKEGSFPGDMSRINPFEKQWESFSEETKLQKRAIELNNGRAAQMGIFGMVVHEIMSNQPYIINDILGE 666
            +AACA  A AFVAPSAF GA+LT     SS+MKM+FE E+GAQAP+G+WDPL  L ++  QERFDRLRYVEIKHGRI MLAILGH+T +N R PG+L  + +  FAD PNGL AISK+  +G+ QI +FIGFLE  VM QKEGSFPGDMS INPFEK+WES++EE +  KRAIELNNGRAAQMGI G++VHE ++N PY+IN+ILG 
Sbjct:   11 VAACAATASAFVAPSAFKGASLTAAKPASSSMKMSFETEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLAILGHITAQNFRFPGMLAPSADLSFADCPNGLAAISKIPLYGLIQIFLFIGFLETKVMLQKEGSFPGDMSLINPFEKEWESWTEEEQATKRAIELNNGRAAQMGILGLMVHEQINNTPYVINEILGS 217          
BLAST of mRNA_L-elsbetiae_contig6445.15118.1 vs. uniprot
Match: A0A6H5JHT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT6_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 4.140e-82
Identity = 127/195 (65.13%), Postives = 158/195 (81.03%), Query Frame = 1
Query:   97 SAFNGAALTTRARTSSAMKMNFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRICMLAILGHLTQENVRLPGLLN--FETPFADVPNGLGAISKMGGFGVAQIVVFIGFLELFVMKQKEGSFPGDMSRI-NPFEKQWESFSEETKLQKRAIELNNGRAAQMGIFGMVVHEIMSNQPYIINDILGEKW 672
            SAFNGAA+ T A++SSAMKM+FE+E+GAQ PLGFWDPL  L +ADQERF+RLRYVE+KHGRI MLAI GHLTQ+NVRLPG+L+   +  FAD+PNG+ A+SK+   G+AQI  F+GFLEL VMK  EGSFPGD +   NPF   W++ SEET+  KRAIELNNGRAAQMGI  ++VHE ++N+PY+IND+LG  +
Sbjct:   24 SAFNGAAVATSAKSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSADLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGY 218          
BLAST of mRNA_L-elsbetiae_contig6445.15118.1 vs. uniprot
Match: FCPC_MACPY (Fucoxanthin-chlorophyll a-c binding protein C, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPC_MACPY)

HSP 1 Score: 253 bits (647), Expect = 4.030e-81
Identity = 130/209 (62.20%), Postives = 162/209 (77.51%), Query Frame = 1
Query:   55 LLAACAGAQAFVAPSAFNGAALTTRARTSSAMKMNFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRICMLAILGHLTQENVRLPGLLNFET--PFADVPNGLGAISKMGGFGVAQIVVFIGFLELFVMKQKEGSFPGDMSRI-NPFEKQWESFSEETKLQKRAIELNNGRAAQMGIFGMVVHEIMSNQPYIINDILGEKW 672
            ++A  + A     PSAFNGAALTT A++SSAMKM+FE+E+GAQAPLGFWDPL  LE+ADQ+ F+RLRYVE+K GRI MLAI GHLTQ+N RLPG+L+      FAD+PNG+ A+SK+   G+AQI  FIGFLEL VMK  EGSFPGD +   NPF   W++ S ET+  KRAIELNNGRAAQMGI  ++VHE ++N+PY+IND+LG  +
Sbjct:    5 IMAVASAAPGLRGPSAFNGAALTTSAKSSSAMKMSFESEIGAQAPLGFWDPLGLLEDADQDAFERLRYVEVKLGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSAETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASY 213          
BLAST of mRNA_L-elsbetiae_contig6445.15118.1 vs. uniprot
Match: FCPE_MACPY (Fucoxanthin-chlorophyll a-c binding protein E, chloroplastic n=3 Tax=Phaeophyceae TaxID=2870 RepID=FCPE_MACPY)

HSP 1 Score: 251 bits (640), Expect = 4.050e-80
Identity = 128/206 (62.14%), Postives = 157/206 (76.21%), Query Frame = 1
Query:   64 ACAGAQAFVAPSAFNGAALTTRARTSSAMKMNFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRICMLAILGHLTQENVRLPGLLNFET--PFADVPNGLGAISKMGGFGVAQIVVFIGFLELFVMKQKEGSFPGDMSRI-NPFEKQWESFSEETKLQKRAIELNNGRAAQMGIFGMVVHEIMSNQPYIINDILGEKW 672
            ACA A        FNGAAL T A++SSAMKM+FE+E+GAQ P+GFWDPL  + +ADQERFDRLRYVEIKHGRI MLA++GH+TQ+N RLPG+L+F+    FAD PNG+ A SK+   G  QI++ IG  ELFV+KQ EGSFPGD +   N F+  W++ SEET+  KRAIELNNGRAAQMGI  M+VHE +SNQPYIIND+ G  +
Sbjct:    4 ACAAAPGLRGAEPFNGAALATSAKSSSAMKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVVGHITQQNTRLPGMLSFKENLAFADSPNGVAAFSKIPPLGTLQIILAIGCHELFVVKQVEGSFPGDCTTGGNIFQSAWDNMSEETQASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAY 209          
BLAST of mRNA_L-elsbetiae_contig6445.15118.1 vs. uniprot
Match: D8LNK6_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK6_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 6.530e-79
Identity = 127/194 (65.46%), Postives = 156/194 (80.41%), Query Frame = 1
Query:  100 AFNGAALTTRARTSSAMKMNFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRICMLAILGHLTQENVRLPGLLNFET--PFADVPNGLGAISKMGGFGVAQIVVFIGFLELFVMKQKEGSFPGDMSRI-NPFEKQWESFSEETKLQKRAIELNNGRAAQMGIFGMVVHEIMSNQPYIINDILGEKW 672
            AFNGAA+ T A++SSAMKM+FE+E+GAQ PLGFWDPL  LE+ADQERF+RLRYVE+KHGRI MLAI GHLTQ+N RLPG+L+      FAD+PNG+ A+SK+   G+AQI  FIGFLEL VMK  EGSFPGD +   NPF   W++ SEET+  KRAIELNNGRAAQMGI  ++VHE ++N+PY+IND+LG  +
Sbjct:  181 AFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGY 374          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6445.15118.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKU4_ECTSI1.180e-12485.31Chlorophyll binding protein n=2 Tax=Ectocarpus Tax... [more]
Q9FEP5_SACLA6.870e-11481.12Light harvesting protein lhcf3 (Fragment) n=1 Tax=... [more]
A0A6H5KCX6_9PHAE1.140e-8865.12LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepI... [more]
FCPF_MACPY4.830e-8666.99Fucoxanthin-chlorophyll a-c binding protein F, chl... [more]
FCPB_MACPY5.910e-8663.98Fucoxanthin-chlorophyll a-c binding protein B, chl... [more]
D7FIR0_ECTSI1.400e-8566.67Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A6H5JHT6_9PHAE4.140e-8265.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
FCPC_MACPY4.030e-8162.20Fucoxanthin-chlorophyll a-c binding protein C, chl... [more]
FCPE_MACPY4.050e-8062.14Fucoxanthin-chlorophyll a-c binding protein E, chl... [more]
D8LNK6_ECTSI6.530e-7965.46Light harvesting complex protein n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6445contigL-elsbetiae_contig6445:3545..6730 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score366.3
Seed ortholog evalue1.4e-98
Seed eggNOG ortholog2880.D7FKU4
Hectar predicted targeting categorychloroplast
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2CDPH@1,2S3EU@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionChlorophyll binding protein
Ec32 orthologEc-17_001410.1
Exons4
Model size921
Cds size921
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6445.15118.1prot_L-elsbetiae_contig6445.15118.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6445 3545..6730 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816711.3130925-CDS-L-elsbetiae_contig6445:3544..36421622816711.3130925-CDS-L-elsbetiae_contig6445:3544..3642Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6445 3545..3642 +
1691683757.7867236-CDS-L-elsbetiae_contig6445:3544..36421691683757.7867236-CDS-L-elsbetiae_contig6445:3544..3642Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6445 3545..3642 +
1622816711.3258011-CDS-L-elsbetiae_contig6445:5394..56111622816711.3258011-CDS-L-elsbetiae_contig6445:5394..5611Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6445 5395..5611 +
1691683757.8001323-CDS-L-elsbetiae_contig6445:5394..56111691683757.8001323-CDS-L-elsbetiae_contig6445:5394..5611Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6445 5395..5611 +
1622816711.3357913-CDS-L-elsbetiae_contig6445:5990..60711622816711.3357913-CDS-L-elsbetiae_contig6445:5990..6071Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6445 5991..6071 +
1691683757.8118832-CDS-L-elsbetiae_contig6445:5990..60711691683757.8118832-CDS-L-elsbetiae_contig6445:5990..6071Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6445 5991..6071 +
1622816711.3486261-CDS-L-elsbetiae_contig6445:6205..67301622816711.3486261-CDS-L-elsbetiae_contig6445:6205..6730Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6445 6206..6730 +
1691683757.8212144-CDS-L-elsbetiae_contig6445:6205..67301691683757.8212144-CDS-L-elsbetiae_contig6445:6205..6730Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6445 6206..6730 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6445.15118.1

>prot_L-elsbetiae_contig6445.15118.1 ID=prot_L-elsbetiae_contig6445.15118.1|Name=mRNA_L-elsbetiae_contig6445.15118.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=307bp
LSPQAFLTFTLNMKCIAMLLAACAGAQAFVAPSAFNGAALTTRARTSSAM
KMNFENELGAQAPLGFWDPLYWLENADQERFDRLRYVEIKHGRICMLAIL
GHLTQENVRLPGLLNFETPFADVPNGLGAISKMGGFGVAQIVVFIGFLEL
FVMKQKEGSFPGDMSRINPFEKQWESFSEETKLQKRAIELNNGRAAQMGI
FGMVVHEIMSNQPYIINDILGEKWLACLPRFYIHHAAVLNPLATTKSRWF
EVYGSCCVCVVALTAKFCAQNCRLCSKYLKWSKSSSYSPTPETHVFHFSG
TSYTWP*
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mRNA from alignment at L-elsbetiae_contig6445:3545..6730+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6445.15118.1 ID=mRNA_L-elsbetiae_contig6445.15118.1|Name=mRNA_L-elsbetiae_contig6445.15118.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3186bp|location=Sequence derived from alignment at L-elsbetiae_contig6445:3545..6730+ (Laminarionema elsbetiae ELsaHSoW15)
CTTTCTCCTCAGGCATTTTTGACGTTCACGCTAAACATGAAGTGCATCGC TATGTTGTTGGCTGCTTGCGCCGGAGCCCAAGCCTTTGTGGCCCCCAGGT GAGTTCAAATCTGTGTGTCCGTGCCGTCCAAGCGTTCATATACCCCGACA TGGAGCGTTGGCTCTCTATCTCTGGGTAGTCATGTGTCATCTTACCATTG CGCACAGCTAGTCGCGACCAGGCTCTATGCACCGCCCAGACCCCCTGGAA TTGAAGGAGATCCAGGGCATCCATTGAAGCTGAATAGAACTAGGTACGGT AGAGTCGTGCGTGTTGCCAATTTGCGATCTTTCGCTTCAAGAAAACTACT GCGGCTGGGAACGCGGCCCATTTTTTTGGCATGTTGCGAGCGACGACGAG AGGACGAGAGAGTGGCTTGGCAAGCCTACCTCTGTCCGTGCACACACACA CGCGCGCGAGAGATGGCCCTAGAAGTTGGATTGAAGTTTGGTTTAGTGGA CGAGATGCACCGCATAGCCGCATAGCTCTGTGGGGAGAAAGCGTCTGTGC GTCAGCCTCTTTTCCGAGTTCGTAGAGTAGGGTACGTACGGGTTCATGCG TTACCCTGCTACAGAGTACGTCATCAACGATTGGTGTGTGGCAAAGACCA TTGCTATTCTAACGAGTGTCCCTGTTTTGCGCATTTTTTTCTGAAACTCG TTGGATGCTTCCCTCTAATTTGCATGTTGATTTATGCACATAAACATCAT ATGTAGATCTACTAAATAGTCCAGGTCAATAACTTATGTACCTGGATGTT GATTCCAAAAAAAAAGTAAACTGGCGTGTGTAACTGGCGTTTAAGACTTA TTTTTTCGTTTTCGAACTCGATTCTAAATGGGGTAGCTGTGCCAATTTTG AAACCTTCGAGAACAGCAAAGGCTTCGTTTCTTTTGAAAAAAGTGTCTTG TATCCTACGATTAATTGTGGATTCTGAACCCCCCTTTTTTACCAGGCCGT TTATGGCGTTTGTACGAGACCTGTGAGTGTTGTTGTGTTGTTTCTTCACA TTAAAAACCGCCCGATATCTCCACCCAGTACCTCCCTGTGTCCGTACAAT CCAACACTTGATGCGGTCAATTCCCCCCAAAAGGTATACGACAAAAAAAA TGGGCCCAAAGGGTCAGCACGCGATAAAATCAAAGACAAATAGTGTGGGG CCCCTCACCCCCCTCTGCACGCCTACATCCACTCTGGTTGCTGTACTCAC GTGTTACTTCGTTGAATGGCGTTTAGAGACGGTTTTTTATGCGTCGATTT TTCAACGATTCAACAAATACTACACCCTTGTGTGCGCCCCCCCGCCCTCT CCACACCATCTCTCCTGAACACTGACACGAATACTATTTTCCTGGACACG CCTGGTTGCTTAGTTCTTCGAAACAAGTCTTGCACGGCTAAGTATCAAAC GCCGTTTGCGCCCCACCAGCCACCGCGCCATAACTTTTTCACCTACTTAA GGTAAACACGTTGCCATACGGCAGCCCCCCCGGCCTTGACCGATGAGCAG ATTTTATCGAAATCTTCCTTCAATTTCGGGAGTTTGTGCGTGAAACCGTT CTTTTCAGTATTGAAGCAGGGGTTAAAATGGATACAGCCCGTCGAAATGT GGCGGCCCTAAGTTTCCGGGTCGCCGACTTGCCCGAAAATTGTGCAGGCA ACACAGCCCGTTCAGTCACAGCTTAAGTGCGCGGCGACATCATGAAATAC ATATTTTGGGACTGGGGCTCGACTTTCACTGTCTAGGGCTCATTGCATGG TTATCTGTGTGCCCGTCGCCTGTGCTACTGCGCCGGACCTATCGTTTCAG CGCCTTCAACGGGGCCGCCTTGACCACCCGGGCAAGGACCTCCTCCGCGA TGAAGATGAACTTCGAGAACGAACTTGGTGCCCAGGCCCCGCTCGGATTC TGGGACCCACTCTACTGGCTGGAGAACGCAGACCAGGAGAGGTTTGACCG CCTCCGGTACGTGGAGATCAAGCACGGACGCATCTGTATGCTTGCCATCC TCGGACACCTCACCCAGGTGAGCACCAACTTCACATATTTTTTAGCATAC CGACTGATAATGGAGGAATGAGATTAATGAAGTTTGGGTGAAGGACCTGT GGTATATAAATTTGTGGAAGATACCCACAAGTAATACAACTCGAGGAATC ATTTTGCCTTCATAATCGTCCAAGTGCGCGCTTTCGTAGCTCTCGTTCAC GCTCTCGATGGTGCTATATGCACATTTGGTACTCGCAGTCGTCCATGACG GACCAACCCTCGTCTTGCCCGTTTTTGGTGTACTTTGTGAAACTCTTACC TGCCATGCCTTCGCTCCTTGCCGTCAGCGAGCCCATATTCTTATATTTGT TCTTCGCATATGCTTGGTCGCTGTGCTCGGACTCACTTTTGAACAGGAGA ACGTGCGTCTCCCGGGCTTGCTTAACTTCGAAACGCCCTTCGCGGACGTG CCTAACGGCCTTGGCGCCATCAGCAAGGTTTGTTGCGTTTTTCTGTATCC TGAAGGGGTCGAGGTCGCACACCGATTGTCAATGTACCGAAGTACGGTCG CGTTTTTTGCGAAGAAAGGACCCTGCAACGACGCTCTTGTCCGTTTTTCG CATCATCGCAGATGGGCGGCTTCGGCGTCGCCCAGATCGTGGTCTTCATC GGCTTCCTTGAGCTTTTCGTCATGAAGCAAAAGGAGGGTTCCTTCCCTGG CGACATGTCACGTATCAACCCGTTCGAGAAGCAGTGGGAGTCCTTCTCCG AGGAGACCAAGCTCCAGAAGCGCGCGATTGAGCTCAACAACGGCCGTGCT GCGCAGATGGGCATCTTCGGCATGGTGGTGCACGAGATCATGAGCAACCA ACCTTACATCATCAACGACATCCTCGGTGAGAAGTGGTTGGCATGCTTAC CCCGCTTTTATATACACCATGCCGCGGTTTTGAACCCCTTGGCCACCACG AAGTCTCGCTGGTTTGAAGTTTATGGGTCATGCTGTGTATGTGTTGTTGC ATTGACGGCAAAGTTTTGTGCTCAAAACTGTAGATTATGTTCAAAATACC TCAAATGGTCGAAATCATCATCTTATTCGCCCACCCCCGAAACCCATGTT TTCCATTTCTCAGGTACCTCGTACACCTGGCCTTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6445:3545..6730+

>mRNA_L-elsbetiae_contig6445.15118.1 ID=mRNA_L-elsbetiae_contig6445.15118.1|Name=mRNA_L-elsbetiae_contig6445.15118.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1842bp|location=Sequence derived from alignment at L-elsbetiae_contig6445:3545..6730+ (Laminarionema elsbetiae ELsaHSoW15)
CTTTCTCCTCAGGCATTTTTGACGTTCACGCTAAACATGAAGTGCATCGC
TATGTTGTTGGCTGCTTGCGCCGGAGCCCAAGCCTTTGTGGCCCCCAGCT
TTCTCCTCAGGCATTTTTGACGTTCACGCTAAACATGAAGTGCATCGCTA
TGTTGTTGGCTGCTTGCGCCGGAGCCCAAGCCTTTGTGGCCCCCAGCGCC
TTCAACGGGGCCGCCTTGACCACCCGGGCAAGGACCTCCTCCGCGATGAA
GATGAACTTCGAGAACGAACTTGGTGCCCAGGCCCCGCTCGGATTCTGGG
ACCCACTCTACTGGCTGGAGAACGCAGACCAGGAGAGGTTTGACCGCCTC
CGGTACGTGGAGATCAAGCACGGACGCATCTGTATGCTTGCCATCCTCGG
ACACCTCACCCAGCGCCTTCAACGGGGCCGCCTTGACCACCCGGGCAAGG
ACCTCCTCCGCGATGAAGATGAACTTCGAGAACGAACTTGGTGCCCAGGC
CCCGCTCGGATTCTGGGACCCACTCTACTGGCTGGAGAACGCAGACCAGG
AGAGGTTTGACCGCCTCCGGTACGTGGAGATCAAGCACGGACGCATCTGT
ATGCTTGCCATCCTCGGACACCTCACCCAGGAGAACGTGCGTCTCCCGGG
CTTGCTTAACTTCGAAACGCCCTTCGCGGACGTGCCTAACGGCCTTGGCG
CCATCAGCAAGGAGAACGTGCGTCTCCCGGGCTTGCTTAACTTCGAAACG
CCCTTCGCGGACGTGCCTAACGGCCTTGGCGCCATCAGCAAGATGGGCGG
CTTCGGCGTCGCCCAGATCGTGGTCTTCATCGGCTTCCTTGAGCTTTTCG
TCATGAAGCAAAAGGAGGGTTCCTTCCCTGGCGACATGTCACGTATCAAC
CCGTTCGAGAAGCAGTGGGAGTCCTTCTCCGAGGAGACCAAGCTCCAGAA
GCGCGCGATTGAGCTCAACAACGGCCGTGCTGCGCAGATGGGCATCTTCG
GCATGGTGGTGCACGAGATCATGAGCAACCAACCTTACATCATCAACGAC
ATCCTCGGTGAGAAGTGGTTGGCATGCTTACCCCGCTTTTATATACACCA
TGCCGCGGTTTTGAACCCCTTGGCCACCACGAAGTCTCGCTGGTTTGAAG
TTTATGGGTCATGCTGTGTATGTGTTGTTGCATTGACGGCAAAGTTTTGT
GCTCAAAACTGTAGATTATGTTCAAAATACCTCAAATGGTCGAAATCATC
ATCTTATTCGCCCACCCCCGAAACCCATGTTTTCCATTTCTCAGGTACCT
CGTACACCTGGCCTTGAATGGGCGGCTTCGGCGTCGCCCAGATCGTGGTC
TTCATCGGCTTCCTTGAGCTTTTCGTCATGAAGCAAAAGGAGGGTTCCTT
CCCTGGCGACATGTCACGTATCAACCCGTTCGAGAAGCAGTGGGAGTCCT
TCTCCGAGGAGACCAAGCTCCAGAAGCGCGCGATTGAGCTCAACAACGGC
CGTGCTGCGCAGATGGGCATCTTCGGCATGGTGGTGCACGAGATCATGAG
CAACCAACCTTACATCATCAACGACATCCTCGGTGAGAAGTGGTTGGCAT
GCTTACCCCGCTTTTATATACACCATGCCGCGGTTTTGAACCCCTTGGCC
ACCACGAAGTCTCGCTGGTTTGAAGTTTATGGGTCATGCTGTGTATGTGT
TGTTGCATTGACGGCAAAGTTTTGTGCTCAAAACTGTAGATTATGTTCAA
AATACCTCAAATGGTCGAAATCATCATCTTATTCGCCCACCCCCGAAACC
CATGTTTTCCATTTCTCAGGTACCTCGTACACCTGGCCTTGA
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