mRNA_L-elsbetiae_contig6378.15040.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6378.15040.1
Unique NamemRNA_L-elsbetiae_contig6378.15040.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 4.590e-63
Identity = 150/296 (50.68%), Postives = 192/296 (64.86%), Query Frame = 3
Query:  516 NSNSRRFDGVTPLHVAADMGHVNAIKLLLRAKANPLLTFVR-PSGHTHVPLDVAAK-GHLEVVRELIQQRGQRLCW-CKRRCRCPHRGGRGGHIDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLL-QHKARPS-GGIAYINSSDTMGKTPLLHAIDRTSPRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKS--VGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLPPTTHAAAEGTGKSTTTSTSLTLMMPILRRRVQRPRVLPAALFRNAKKP 1382
            N NSRR DG TPL+ AA  G+V+A +LLL AKA+PLLT V  PSG T +PLD AA+ GH EVV ELI+Q G   C       R   +  +  +++IM +L +AGVVD G AL+ AAG GGE  +KFLL Q +AR +    AY+N+ D  G TPLL  I    PR  RLL++AGADTTSPV + N  G     +TPL  T   +RDK   VG   A+ +QL +L+AIR+LLL+VEAVHA+SWLW SD+   T AAA GT ++T  ST++TL M + RRR +  +V  AAL R + KP
Sbjct:  140 NLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435          
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 1.880e-60
Identity = 151/313 (48.24%), Postives = 195/313 (62.30%), Query Frame = 3
Query:  489 IKLLIEAGANSNSRRFDGVTPLHVAADMGHVNAIKLLLRAKANPLLTFVRPSGHTH-VPLDVAAK-GHLEVVRELIQQRGQRLCWCKRRCRCPHRGGRGGH-----------IDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLL-QHKARPSGG-IAYINSSDTMGKTPLLHAIDRTSPRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKSVGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLPPTTHAAAEGTGKSTTTSTSLT-LMMPILRRRVQRPRVLPAALFRNAKK 1379
            +  L++AG+N N+RR DG TPL+ AA  G+V A+ LLL AKA+PLLT    SG    +PLDVAA+ GH EVV ELI+Q G   C           G  GG            +DIMA+L DAGVVD G AL+ AAG GGEA +KFLL Q + R S    AY+N+ + +G T LL  I R  PR  +LL++AGADTTSPV I N  G   F +TPL  T  +L  +S  AK  T ++  +L+ IR+LLL+ EAVHA+SWLW SD P  THA A+GTG++T TST+ T  +M ++ RR +  + L AAL R + K
Sbjct:  131 VTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCG----------GSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRS--AKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYSSK 431          
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 1.240e-54
Identity = 140/298 (46.98%), Postives = 185/298 (62.08%), Query Frame = 3
Query:  537 DGVTPLHVAADMGHVNAIKLLLRAKANPLLTFVRPSGHTH-VPLDVAAK-GHLEVVRELIQQRGQRLCWCKRRCRCPHR---GGRGGHIDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLLQHKARPSG-GI--AYINSSDTMGKTPLLHAID---RTSPRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKSVG-AKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLPPTTHAAAEGTGKSTTTST-----SLTLMMPILRRRVQRPRVLPAALFRNAKK 1379
            DG T LH+AA+ G V  ++ LLR  ANPLL    P G+T  VPLD+AAK GH +VVRELIQ+ G  +  C       H         H+DIMA+L +AGVVD G+AL  AAG G EA+VKFLL+H+ +  G G+  AY+N+ D  G TPL+         +PR  R+L+DAGADTTSPV+++N +G V F  TPL +T + LR K V   K AT++ L+RL+AI +LLL+V+AVHA+SWLW S  P          G++T T       +L LM+PIL+RR +R   L A L R + K
Sbjct:  239 DGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELG--IEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAP--------FIGRATETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVK 526          
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 4.870e-50
Identity = 137/294 (46.60%), Postives = 176/294 (59.86%), Query Frame = 3
Query:  537 DGVTPLHVAADMGHVNAIKLLLRAKANPLLTFVRPSGHTHVPLDVAAK-GHLEVVRELIQQRGQRLCWCKRRCRCPH-RGGRGGHIDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLLQHKARPSGGIAYINSSDTMGKTPLLHAI-----DRTS--PRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKSVGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWAS---DLPPTTHAAAEGTGKSTTTSTSLTLMMPILRRRVQRPRVLPAALFRNAKKP 1382
            DG TPL  A   G + A + LLRA ANPL+T  R    T +PLD AA+ G+L V+RELIQ+ G   C  + R        G G  +  MA+L  AGVVD GQAL  +AG G EA+VK+LLQ+ A+  G  AY+N  D  G TPLL +I     D  S  PR ARLL++AGADTT+ +R  N  G+V F  TPL  T  +L+DK V     ++ +L RL+ IR+LLL+VEAVHA SWLW S   D       AAE T  +   +  L  ++PILRRR +RP V+  AL R+ +KP
Sbjct:  133 DGETPLFRAMTEGQLEATRELLRANANPLIT--RAPLPTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPGAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRKP 424          
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 4.110e-43
Identity = 125/300 (41.67%), Postives = 173/300 (57.67%), Query Frame = 3
Query:  498 LIEAGANSNSRRFDGVTPLHVAADMGHVNAIKLLLRAKANPLLT-FVRPSGHTHVPLDVAAK-GHLEVVRELIQQRGQRLCW-CKRRCRCPHRGGRGGHIDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLLQHKARPSGGIAYINSSDTMGKTPLLHAIDRTSPRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKSVGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLPPTTHAAAEGTGKSTTTSTSLTLMMPILRRRVQ-RPRVLP-AALFRNAKKP 1382
            L+EAGAN NSRRFDG TPL +AA  G+V+A++LLL AK +PLLT  +  S    +PLDVAA  GHLEVV ELI+Q G   C       R   +  R  H+D++ +L +AGVVD G A        G   V           G               +     R  PR  RLL++AGADTTS V I    G     +TP+  T ++L D  +G +  TE+QL  L+AI +LLL+VEA+HA+SWLW+SD+   T++ A+GT ++T+ ST+ T ++  +R+R + + R +P AAL R + KP
Sbjct:   36 LLEAGANLNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDTGLARGRRIWRRGPLEVSVGAGKGEENHGWTCVCEHPQRCRFDAIACWHQRCRPRVVRLLVEAGADTTSTVPIDGLPG--TDNITPMGLTMLLLHD--LGTEPLTEEQLNALEAIHRLLLRVEALHAVSWLWSSDICNCTYSTAQGTDRTTSKSTAGTPLVLTMRQRARSKEREVPLAALLRYSSKP 331          
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 1.840e-40
Identity = 106/225 (47.11%), Postives = 135/225 (60.00%), Query Frame = 3
Query:  783 HIDIMAMLMDAGVVDK-GQALISAAGCGGEAAVKFLLQHKARPS--GGIAYINSSDTMGKTPLLHAIDRTS---PRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKSVGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLPPTTHAAAEGTGKSTTTSTSLTLMMPILRRRVQRPRVLPAALFRNAKKP*SGSVRGT**AVLRHSRGG 1439
            H+DIMA+L  AGV D  G  L+  AG G EA+V+FLL+ + + S     AY NSSD  G TPL  +I+  S   PR  RLL+DAGADTTS VR+ N  G V +  TPL  T  +LR+K V  K ATE+QL RL+AIR+LLL+V+AVHA+SWLW SD P   HA     G        L+L +PIL+RR +   V  A L R++      S RG+  A L   + G
Sbjct:    4 HMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSIEWCSSGNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRP-PLSLTLPILKRRAKTCHVFVATLLRSSP---ISSGRGSRRADLSKEKAG 224          
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 9.340e-40
Identity = 125/287 (43.55%), Postives = 166/287 (57.84%), Query Frame = 3
Query:  594 LLLRAKANPLLTFVRPSGHTHVPLDVAA-KGHLEVVRELIQQRGQRLCWCKRRCRCPHRGGRGG------------HIDIMAMLMDAG-VVDKGQALISAAGCGGEAAVKFLLQHKARPSGGIAYINSS-DTMGKTPLLHAID-----RTSPRSARLLIDAGADTTSPVRI--LNPQGIVAFEVTPLVYTNVMLRDKSVGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLPPTTHAAAEGTGK---STTTSTSLTLMMPILRRRVQRPRVLPAALFRNAKK 1379
            +LLRAKANPLL    P G ++VPL++AA  G+ +V RE+I+Q G R C           GG  G            H++ MA+L+DAG VVD G ALI AA  G   AVKFLL+   R +   AY+N + D  G+TP++ A+D       SP+  RLL+DAGA+TT  V +  + P+     E TPL +T  +LR+  V  +AAT++QL+RLK  R LL + EAVHA+SWLWAS  PP    AA  T     ST  +T L  M P+LRR+     VL   LFR ++K
Sbjct:  163 VLLRAKANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGC-----------GGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRR--RQADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSE-TPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435          
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 4.430e-38
Identity = 123/282 (43.62%), Postives = 153/282 (54.26%), Query Frame = 3
Query:  603 RAKANPLLTFVRPSGHTHVPLDVAAK-GHLEVVRELIQQRGQRLCWCKRRCRCPHRGGRGG-----------HIDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLLQHK-ARPSGGIAYINSS-DTMGKTPLLHAID-----RTSPRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKSVGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLP----PTTHAAAEGTGKSTTTSTSLTLMMPILRRRVQRPRVLPAALFRNAKK 1379
            RAKANPLLT V  +   H+PLD AA+ G L VV EL+Q+ G R C           GG GG           H+D+M  L  AGVVD G AL+ A   G    VKFLLQ +   PS   AY++   D  G+TPL+  ID       SP+  RLL+DAGADTTS VR     G +    TPL      LR K    KA  ++ L RL+ IR+LLL+VEAVHA SWLW + +P    P    AA  T  S+TT+  L  ++PILRRR +    + A+L R A K
Sbjct:  168 RAKANPLLTRVNLAWQ-HLPLDTAAQNGRLGVVLELLQRFGIRGCG----------GGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVK 438          
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 5.630e-36
Identity = 119/282 (42.20%), Postives = 158/282 (56.03%), Query Frame = 3
Query:  600 LRAKANPLLTFV-RPSGHTHVPLDVAAK-GHLEVVRELIQQRGQRLCWCKRRCRCPHRGGRGG------------HIDIMAMLMDAGVVDK-GQALISAAGCGGEAAVKFLLQHKARPSGGIAYIN-SSDTMGKTPLLHAIDRT-----SPRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKSVGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLPPTTHAA-AEGTGKSTTTSTSLTLMMPILRRRVQRPRVLPAALFRNAKK 1379
            L AKANPLLT+    SG + VPL+VAA+ G   VV EL+++ G R C           GG  G             +DIM+MLMDAGVVD  G AL++A G G EAAV FLL+ +       +Y+N + D  G T LL +         +PR  R L+DAGADTTS V++   +      VTPL Y N     ++ G   AT++QL RL+A R++LL+V AVHA+SW+W SD P     A +  T K +   T LT ++P+LRRR  R  +L   LFR +KK
Sbjct:  138 LHAKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCC-----------GGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEE-RWQTSYVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHS--PTQLTTVLPVLRRRAGRRALLWDTLFRYSKK 405          
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 5.780e-35
Identity = 120/274 (43.80%), Postives = 148/274 (54.01%), Query Frame = 3
Query:  609 KANPLLTFV-RPSGHTHVPLDVAAK-GHLEVVRELIQQRGQRLCWCKRRCRCPHRGGRGG------------HIDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLLQHKARPSGGIAYINSS-DTMGKTPLLHAIDR---TSPRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKSVGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLPPTTHA--AAEGTGKSTTTSTSLTLMMPILRRRV-QRPRVLPAALFR 1367
            KAN LL  V  PSG T VPLDVA + GH EVVREL  Q G R C           GG  G             +DIM +L   GVVD G+AL+ AA    E +VKFLLQH+A   GG  Y+N++ D  G+TPL+  I+    +SPR AR LIDA ADT S V +           TPL +    LR   VG K ATE+QL  LKAI +LL +V+AVHA+SWLW S     ++A  AA    K T     L  M  +LR  V +R  V+  A++R
Sbjct:  155 KANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGC-----------GGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQA--GGGAWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVVLRAVYR 415          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJA9_9PHAE4.590e-6350.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQV0_9PHAE1.880e-6048.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT11_ECTSI1.240e-5446.98EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LJF9_ECTSI4.870e-5046.60EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FXY7_ECTSI4.110e-4341.67EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LSC5_ECTSI1.840e-4047.11EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1H7_ECTSI9.340e-4043.55EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
D7FVK3_ECTSI4.430e-3843.62EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FVU3_ECTSI5.630e-3642.20EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5K037_9PHAE5.780e-3543.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6378contigL-elsbetiae_contig6378:2029..4695 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score196.1
Seed ortholog evalue2.2e-47
Seed eggNOG ortholog2880.D7FT11
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size2220
Cds size816
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6378.15040.1prot_L-elsbetiae_contig6378.15040.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6378 2864..4126 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816703.7641048-UTR-L-elsbetiae_contig6378:2028..28631622816703.7641048-UTR-L-elsbetiae_contig6378:2028..2863Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6378 2029..2863 -
1691683752.4136767-UTR-L-elsbetiae_contig6378:2028..28631691683752.4136767-UTR-L-elsbetiae_contig6378:2028..2863Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6378 2029..2863 -
1622816703.8012233-UTR-L-elsbetiae_contig6378:4126..46951622816703.8012233-UTR-L-elsbetiae_contig6378:4126..4695Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6378 4127..4695 -
1691683752.4588494-UTR-L-elsbetiae_contig6378:4126..46951691683752.4588494-UTR-L-elsbetiae_contig6378:4126..4695Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6378 4127..4695 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816703.7758567-CDS-L-elsbetiae_contig6378:2863..28821622816703.7758567-CDS-L-elsbetiae_contig6378:2863..2882Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6378 2864..2882 -
1691683752.4253764-CDS-L-elsbetiae_contig6378:2863..28821691683752.4253764-CDS-L-elsbetiae_contig6378:2863..2882Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6378 2864..2882 -
1622816703.787799-CDS-L-elsbetiae_contig6378:3329..41261622816703.787799-CDS-L-elsbetiae_contig6378:3329..4126Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6378 3330..4126 -
1691683752.4463882-CDS-L-elsbetiae_contig6378:3329..41261691683752.4463882-CDS-L-elsbetiae_contig6378:3329..4126Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6378 3330..4126 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6378.15040.1

>prot_L-elsbetiae_contig6378.15040.1 ID=prot_L-elsbetiae_contig6378.15040.1|Name=mRNA_L-elsbetiae_contig6378.15040.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=272bp
MGHVNAIKLLLRAKANPLLTFVRPSGHTHVPLDVAAKGHLEVVRELIQQR
GQRLCWCKRRCRCPHRGGRGGHIDIMAMLMDAGVVDKGQALISAAGCGGE
AAVKFLLQHKARPSGGIAYINSSDTMGKTPLLHAIDRTSPRSARLLIDAG
ADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKSVGAKAATEDQLERLKA
IRQLLLKVEAVHAMSWLWASDLPPTTHAAAEGTGKSTTTSTSLTLMMPIL
RRRVQRPRVLPAALFRNAKKP*
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mRNA from alignment at L-elsbetiae_contig6378:2029..4695-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6378.15040.1 ID=mRNA_L-elsbetiae_contig6378.15040.1|Name=mRNA_L-elsbetiae_contig6378.15040.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2667bp|location=Sequence derived from alignment at L-elsbetiae_contig6378:2029..4695- (Laminarionema elsbetiae ELsaHSoW15)
AGGAGAAGAGAGGAACCAGACGGCGTGTGTTAATCTTCAAGCGCACGTTT ATAGGCCTGGCGCAACCCTGCGCGCGCACTCGAAAAAAGAAAAAACGTGA GCCACACAACACACACGCCGGCCTCGAGCGACAATGAACGAGGGGTTGCA CTTTGCTGCTTGTAATGGTTTAACCCAGCGCACGGTAAGCCTGCTCTTGG GGGGAGTTGTCGACATTGACCAAGGCGGCGTGGACGGCTTTACGCCTCTC ATGCTCGCCGCCGGCAGAGGTCACCTGCGCATTGTCGAGATCCTTCTGAA CAAAGGCGCCAACGTGACAGCTGTCGGTGGACTCGGTGGTTCTGCACTGC ATGGCTCGGTCCAAGGAGGATACCTTGCCGTGACAAAGCTGCTGTTGAAG GCCGGCGCTGGCCTGGAGGTGGCGATGCCTACTGAAGGCTGCACACCGCT TCACCTGGCTGCGGAGCACGGAAAGCCCGCGGTGGTTAATTAAATTGCTG ATCGAGGCAGGGGCGAATTCCAACAGCCGAAGGTTCGACGGTGTGACACC GCTGCACGTCGCGGCTGATATGGGACACGTGAATGCGATCAAGTTGCTTC TTCGTGCGAAAGCGAACCCGCTGTTGACGTTTGTGCGTCCGTCGGGGCAC ACGCATGTCCCTCTAGATGTAGCGGCGAAAGGGCACTTGGAGGTGGTACG CGAGCTGATCCAGCAGCGGGGTCAAAGGTTGTGCTGGTGCAAGCGGCGGT GTAGATGCCCTCACCGCGGCGGCCGCGGGGGGCATATTGACATCATGGCC ATGCTGATGGACGCCGGAGTCGTAGATAAGGGCCAAGCACTCATCTCCGC AGCGGGATGTGGCGGTGAGGCGGCGGTGAAGTTTCTGTTGCAGCATAAGG CAAGACCCAGCGGTGGGATTGCATACATAAATTCCTCCGACACCATGGGT AAAACGCCTTTGCTTCATGCAATTGACCGTACCTCCCCCAGGAGCGCACG GCTGCTCATTGACGCCGGTGCGGACACGACTTCGCCTGTTAGAATCCTGA ACCCCCAGGGAATCGTAGCGTTCGAGGTCACACCCCTGGTGTACACGAAC GTTATGCTCCGTGATAAGAGTGTAGGAGCAAAGGCCGCAACAGAGGACCA GCTAGAACGCCTGAAGGCGATTCGGCAGTTGCTGTTGAAGGTGGAGGCGG TTCATGCTATGTCTTGGCTGTGGGCGAGCGACCTCCCGCCCACCACCCAT GCTGCTGCGGAGGGTACGGGCAAGAGCACGACGACTTCGACCTCCCTGAC GTTGATGATGCCAATATTGAGGCGGAGGGTTCAGAGACCCAGGGTGCTCC CGGCTGCCCTGTTCAGGTGGGTGGTTACCTGGTGTGGTCGGCATTCGGGT TTAGGTGTTCCTTGCACCTTCTGTGTCAACGTACGCAATGCATTGAAGCT TCGCGCTGACTCCATCGGCCGCTGTTTGCTTCTGCTGCCCCTGTTCAATT TCTTGTTGGGCACCTGCTTGTTTTCGTGTGTTGCGGCCAGAGCGCCACCG CGTCGCCTTGACTTGCCATGTGGTCAATCTCACGCTTTACACCAAGATAG CTCATAACCGTTCCCTTGATAAGTTTGAAAAGGCCGGAAGTGAAGTTCTT TCTTTGTATATTTTGTTTAGGAGCACTACAACTGCGGTTGCTTCGTTCGA TCCTTCATTTGAAAGTGCTGGAACAACAGAAGCATCCATTCAACCTCTGC GTGGTGGTTGTTTTTCGCGCATGCTTTCGTCCGCTGTCTTGCCGCACTGG CGCACTTCTTCAGGAATGCGAAGAAGCCTTGATCAGGATCGGTTCGCGGG ACGTAATAAGCGGTGCTCCGTCACTCTAGGGGCGGCCTGCGGGGCTCTTT GATAGTACCAGCAGCAGCGCAACCGGCTTGGCTGTTGAGGTGTCCGGGAG GGTCCATGGTACCCGCAGCTGGCGAAGATTCGAAGTATTCATCGTGTGGA TGGGGTATGTAGCGCTGTGACTCGAGGAAGGTGTATCAAGTCGGAATATG TTCAATGACCTAAGTCGGCTTCCGGCGAACGATGCTGCCTGGGAGTCTTC TCCCTAGTAGAAGTATGTATGTGTTCGATGTGGGGAGCTCTTAGTGTTTG TTTATACTGTGCTTCAGAGCGCTCCCGCAAGCTTTGACAGCAATTTCATC TGTGCACTAGAATCACTGCTGTTGTGGTGTTGAGCGGTTACAGAGTTTGT TGAAAGGAGGCTGGATTGAGTCGTTTGGTAGCTGGTATTTTGCGGGTGGG ATCGGCGGAAGACTTGCTGCGGCCCGCGGCTTCACACCTGTTAATCCTTA CAGCAGTAGGCATGTGTTGCCTTGCAATCTGCGCCTGCAGATAATGGATG TTTGTTTTGTGTTTCAGTTGCCAATTTTAAGTTGAAAGCGACGTCAAGAG TAGTGTCTGGCAAAGAGGTGTTCATGTCGAATACTAAGCACGTTTGCGGG GACTAGTGGTGTGGTGGCAATTCATCGTAAGCCGCCCGTGTGCTGCGTAC GGAGGGTGAACACTGCTCTATGTTGTCAAACCAGGCGGTTCAGTTTTTAC ATGAGGCGTGCAAATTAGCCAAGCCTATTATCAAGCAGTACCAATATTTT CACGTGCCCAAACCTGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6378:2029..4695-

>mRNA_L-elsbetiae_contig6378.15040.1 ID=mRNA_L-elsbetiae_contig6378.15040.1|Name=mRNA_L-elsbetiae_contig6378.15040.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1632bp|location=Sequence derived from alignment at L-elsbetiae_contig6378:2029..4695- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGACACGTGAATGCGATCAAGTTGCTTCTTCGTGCGAAAGCGAACCC
GCTGTTGACGTTTGTGCGTCCGTCGGGGCACACGCATGTCCCTCTAGATG
TAGCGGCGAAAGGGCACTTGGAGGTGGTACGCGAGCTGATCCAGCAGCGG
GGTCAAAGGTTGTGCTGGTGCAAGCGGCGGTGTAGATGCCCTCACCGCGG
CGGCCGCGGGGGGCATATTGACATCATGGCCATGCTGATGGACGCCGGAG
TCGTAGATAAGGGCCAAGCACTCATCTCCGCAGCGGGATGTGGCGGTGAG
GCGGCGGTGAAGTTTCTGTTGCAGCATAAGGCAAGACCCAGCGGTGGGAT
TGCATACATAAATTCCTCCGACACCATGGGTAAAACGCCTTTGCTTCATG
CAATTGACCGTACCTCCCCCAGGAGCGCACGGCTGCTCATTGACGCCGGT
GCGGACACGACTTCGCCTGTTAGAATCCTGAACCCCCAGGGAATCGTAGC
GTTCGAGGTCACACCCCTGGTGTACACGAACGTTATGCTCCGTGATAAGA
GTGTAGGAGCAAAGGCCGCAACAGAGGACCAGCTAGAACGCCTGAAGGCG
ATTCGGCAGTTGCTGTTGAAGGTGGAGGCGGTTCATGCTATGTCTTGGCT
GTGGGCGAGCGACCTCCCGCCCACCACCCATGCTGCTGCGGAGGGTACGG
GCAAGAGCACGACGACTTCGACCTCCCTGACGTTGATGATGCCAATATTG
AGGCGGAGGGTTCAGAGACCCAGGGTGCTCCCGGCTGCCCTGTTCAGATG
GGACACGTGAATGCGATCAAGTTGCTTCTTCGTGCGAAAGCGAACCCGCT
GTTGACGTTTGTGCGTCCGTCGGGGCACACGCATGTCCCTCTAGATGTAG
CGGCGAAAGGGCACTTGGAGGTGGTACGCGAGCTGATCCAGCAGCGGGGT
CAAAGGTTGTGCTGGTGCAAGCGGCGGTGTAGATGCCCTCACCGCGGCGG
CCGCGGGGGGCATATTGACATCATGGCCATGCTGATGGACGCCGGAGTCG
TAGATAAGGGCCAAGCACTCATCTCCGCAGCGGGATGTGGCGGTGAGGCG
GCGGTGAAGTTTCTGTTGCAGCATAAGGCAAGACCCAGCGGTGGGATTGC
ATACATAAATTCCTCCGACACCATGGGTAAAACGCCTTTGCTTCATGCAA
TTGACCGTACCTCCCCCAGGAGCGCACGGCTGCTCATTGACGCCGGTGCG
GACACGACTTCGCCTGTTAGAATCCTGAACCCCCAGGGAATCGTAGCGTT
CGAGGTCACACCCCTGGTGTACACGAACGTTATGCTCCGTGATAAGAGTG
TAGGAGCAAAGGCCGCAACAGAGGACCAGCTAGAACGCCTGAAGGCGATT
CGGCAGTTGCTGTTGAAGGTGGAGGCGGTTCATGCTATGTCTTGGCTGTG
GGCGAGCGACCTCCCGCCCACCACCCATGCTGCTGCGGAGGGTACGGGCA
AGAGCACGACGACTTCGACCTCCCTGACGTTGATGATGCCAATATTGAGG
CGGAGGGTTCAGAGACCCAGGGTGCTCCCGGCTGCCCTGTTCAGGAATGC
GAAGAAGCCTTGAGAATGCGAAGAAGCCTTGA
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