mRNA_L-elsbetiae_contig6378.15040.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 226 bits (577), Expect = 4.590e-63 Identity = 150/296 (50.68%), Postives = 192/296 (64.86%), Query Frame = 3 Query: 516 NSNSRRFDGVTPLHVAADMGHVNAIKLLLRAKANPLLTFVR-PSGHTHVPLDVAAK-GHLEVVRELIQQRGQRLCW-CKRRCRCPHRGGRGGHIDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLL-QHKARPS-GGIAYINSSDTMGKTPLLHAIDRTSPRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKS--VGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLPPTTHAAAEGTGKSTTTSTSLTLMMPILRRRVQRPRVLPAALFRNAKKP 1382 N NSRR DG TPL+ AA G+V+A +LLL AKA+PLLT V PSG T +PLD AA+ GH EVV ELI+Q G C R + + +++IM +L +AGVVD G AL+ AAG GGE +KFLL Q +AR + AY+N+ D G TPLL I PR RLL++AGADTTSPV + N G +TPL T +RDK VG A+ +QL +L+AIR+LLL+VEAVHA+SWLW SD+ T AAA GT ++T ST++TL M + RRR + +V AAL R + KP Sbjct: 140 NLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 220 bits (560), Expect = 1.880e-60 Identity = 151/313 (48.24%), Postives = 195/313 (62.30%), Query Frame = 3 Query: 489 IKLLIEAGANSNSRRFDGVTPLHVAADMGHVNAIKLLLRAKANPLLTFVRPSGHTH-VPLDVAAK-GHLEVVRELIQQRGQRLCWCKRRCRCPHRGGRGGH-----------IDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLL-QHKARPSGG-IAYINSSDTMGKTPLLHAIDRTSPRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKSVGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLPPTTHAAAEGTGKSTTTSTSLT-LMMPILRRRVQRPRVLPAALFRNAKK 1379 + L++AG+N N+RR DG TPL+ AA G+V A+ LLL AKA+PLLT SG +PLDVAA+ GH EVV ELI+Q G C G GG +DIMA+L DAGVVD G AL+ AAG GGEA +KFLL Q + R S AY+N+ + +G T LL I R PR +LL++AGADTTSPV I N G F +TPL T +L +S AK T ++ +L+ IR+LLL+ EAVHA+SWLW SD P THA A+GTG++T TST+ T +M ++ RR + + L AAL R + K Sbjct: 131 VTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCG----------GSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRS--AKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYSSK 431
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 206 bits (524), Expect = 1.240e-54 Identity = 140/298 (46.98%), Postives = 185/298 (62.08%), Query Frame = 3 Query: 537 DGVTPLHVAADMGHVNAIKLLLRAKANPLLTFVRPSGHTH-VPLDVAAK-GHLEVVRELIQQRGQRLCWCKRRCRCPHR---GGRGGHIDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLLQHKARPSG-GI--AYINSSDTMGKTPLLHAID---RTSPRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKSVG-AKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLPPTTHAAAEGTGKSTTTST-----SLTLMMPILRRRVQRPRVLPAALFRNAKK 1379 DG T LH+AA+ G V ++ LLR ANPLL P G+T VPLD+AAK GH +VVRELIQ+ G + C H H+DIMA+L +AGVVD G+AL AAG G EA+VKFLL+H+ + G G+ AY+N+ D G TPL+ +PR R+L+DAGADTTSPV+++N +G V F TPL +T + LR K V K AT++ L+RL+AI +LLL+V+AVHA+SWLW S P G++T T +L LM+PIL+RR +R L A L R + K Sbjct: 239 DGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELG--IEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAP--------FIGRATETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVK 526
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 191 bits (484), Expect = 4.870e-50 Identity = 137/294 (46.60%), Postives = 176/294 (59.86%), Query Frame = 3 Query: 537 DGVTPLHVAADMGHVNAIKLLLRAKANPLLTFVRPSGHTHVPLDVAAK-GHLEVVRELIQQRGQRLCWCKRRCRCPH-RGGRGGHIDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLLQHKARPSGGIAYINSSDTMGKTPLLHAI-----DRTS--PRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKSVGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWAS---DLPPTTHAAAEGTGKSTTTSTSLTLMMPILRRRVQRPRVLPAALFRNAKKP 1382 DG TPL A G + A + LLRA ANPL+T R T +PLD AA+ G+L V+RELIQ+ G C + R G G + MA+L AGVVD GQAL +AG G EA+VK+LLQ+ A+ G AY+N D G TPLL +I D S PR ARLL++AGADTT+ +R N G+V F TPL T +L+DK V ++ +L RL+ IR+LLL+VEAVHA SWLW S D AAE T + + L ++PILRRR +RP V+ AL R+ +KP Sbjct: 133 DGETPLFRAMTEGQLEATRELLRANANPLIT--RAPLPTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPGAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRKP 424
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI) HSP 1 Score: 169 bits (427), Expect = 4.110e-43 Identity = 125/300 (41.67%), Postives = 173/300 (57.67%), Query Frame = 3 Query: 498 LIEAGANSNSRRFDGVTPLHVAADMGHVNAIKLLLRAKANPLLT-FVRPSGHTHVPLDVAAK-GHLEVVRELIQQRGQRLCW-CKRRCRCPHRGGRGGHIDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLLQHKARPSGGIAYINSSDTMGKTPLLHAIDRTSPRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKSVGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLPPTTHAAAEGTGKSTTTSTSLTLMMPILRRRVQ-RPRVLP-AALFRNAKKP 1382 L+EAGAN NSRRFDG TPL +AA G+V+A++LLL AK +PLLT + S +PLDVAA GHLEVV ELI+Q G C R + R H+D++ +L +AGVVD G A G V G + R PR RLL++AGADTTS V I G +TP+ T ++L D +G + TE+QL L+AI +LLL+VEA+HA+SWLW+SD+ T++ A+GT ++T+ ST+ T ++ +R+R + + R +P AAL R + KP Sbjct: 36 LLEAGANLNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDTGLARGRRIWRRGPLEVSVGAGKGEENHGWTCVCEHPQRCRFDAIACWHQRCRPRVVRLLVEAGADTTSTVPIDGLPG--TDNITPMGLTMLLLHD--LGTEPLTEEQLNALEAIHRLLLRVEALHAVSWLWSSDICNCTYSTAQGTDRTTSKSTAGTPLVLTMRQRARSKEREVPLAALLRYSSKP 331
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 158 bits (400), Expect = 1.840e-40 Identity = 106/225 (47.11%), Postives = 135/225 (60.00%), Query Frame = 3 Query: 783 HIDIMAMLMDAGVVDK-GQALISAAGCGGEAAVKFLLQHKARPS--GGIAYINSSDTMGKTPLLHAIDRTS---PRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKSVGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLPPTTHAAAEGTGKSTTTSTSLTLMMPILRRRVQRPRVLPAALFRNAKKP*SGSVRGT**AVLRHSRGG 1439 H+DIMA+L AGV D G L+ AG G EA+V+FLL+ + + S AY NSSD G TPL +I+ S PR RLL+DAGADTTS VR+ N G V + TPL T +LR+K V K ATE+QL RL+AIR+LLL+V+AVHA+SWLW SD P HA G L+L +PIL+RR + V A L R++ S RG+ A L + G Sbjct: 4 HMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSIEWCSSGNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRP-PLSLTLPILKRRAKTCHVFVATLLRSSP---ISSGRGSRRADLSKEKAG 224
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 162 bits (410), Expect = 9.340e-40 Identity = 125/287 (43.55%), Postives = 166/287 (57.84%), Query Frame = 3 Query: 594 LLLRAKANPLLTFVRPSGHTHVPLDVAA-KGHLEVVRELIQQRGQRLCWCKRRCRCPHRGGRGG------------HIDIMAMLMDAG-VVDKGQALISAAGCGGEAAVKFLLQHKARPSGGIAYINSS-DTMGKTPLLHAID-----RTSPRSARLLIDAGADTTSPVRI--LNPQGIVAFEVTPLVYTNVMLRDKSVGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLPPTTHAAAEGTGK---STTTSTSLTLMMPILRRRVQRPRVLPAALFRNAKK 1379 +LLRAKANPLL P G ++VPL++AA G+ +V RE+I+Q G R C GG G H++ MA+L+DAG VVD G ALI AA G AVKFLL+ R + AY+N + D G+TP++ A+D SP+ RLL+DAGA+TT V + + P+ E TPL +T +LR+ V +AAT++QL+RLK R LL + EAVHA+SWLWAS PP AA T ST +T L M P+LRR+ VL LFR ++K Sbjct: 163 VLLRAKANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGC-----------GGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRR--RQADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSE-TPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 157 bits (398), Expect = 4.430e-38 Identity = 123/282 (43.62%), Postives = 153/282 (54.26%), Query Frame = 3 Query: 603 RAKANPLLTFVRPSGHTHVPLDVAAK-GHLEVVRELIQQRGQRLCWCKRRCRCPHRGGRGG-----------HIDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLLQHK-ARPSGGIAYINSS-DTMGKTPLLHAID-----RTSPRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKSVGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLP----PTTHAAAEGTGKSTTTSTSLTLMMPILRRRVQRPRVLPAALFRNAKK 1379 RAKANPLLT V + H+PLD AA+ G L VV EL+Q+ G R C GG GG H+D+M L AGVVD G AL+ A G VKFLLQ + PS AY++ D G+TPL+ ID SP+ RLL+DAGADTTS VR G + TPL LR K KA ++ L RL+ IR+LLL+VEAVHA SWLW + +P P AA T S+TT+ L ++PILRRR + + A+L R A K Sbjct: 168 RAKANPLLTRVNLAWQ-HLPLDTAAQNGRLGVVLELLQRFGIRGCG----------GGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVK 438
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 150 bits (380), Expect = 5.630e-36 Identity = 119/282 (42.20%), Postives = 158/282 (56.03%), Query Frame = 3 Query: 600 LRAKANPLLTFV-RPSGHTHVPLDVAAK-GHLEVVRELIQQRGQRLCWCKRRCRCPHRGGRGG------------HIDIMAMLMDAGVVDK-GQALISAAGCGGEAAVKFLLQHKARPSGGIAYIN-SSDTMGKTPLLHAIDRT-----SPRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKSVGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLPPTTHAA-AEGTGKSTTTSTSLTLMMPILRRRVQRPRVLPAALFRNAKK 1379 L AKANPLLT+ SG + VPL+VAA+ G VV EL+++ G R C GG G +DIM+MLMDAGVVD G AL++A G G EAAV FLL+ + +Y+N + D G T LL + +PR R L+DAGADTTS V++ + VTPL Y N ++ G AT++QL RL+A R++LL+V AVHA+SW+W SD P A + T K + T LT ++P+LRRR R +L LFR +KK Sbjct: 138 LHAKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCC-----------GGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEE-RWQTSYVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHS--PTQLTTVLPVLRRRAGRRALLWDTLFRYSKK 405
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 148 bits (373), Expect = 5.780e-35 Identity = 120/274 (43.80%), Postives = 148/274 (54.01%), Query Frame = 3 Query: 609 KANPLLTFV-RPSGHTHVPLDVAAK-GHLEVVRELIQQRGQRLCWCKRRCRCPHRGGRGG------------HIDIMAMLMDAGVVDKGQALISAAGCGGEAAVKFLLQHKARPSGGIAYINSS-DTMGKTPLLHAIDR---TSPRSARLLIDAGADTTSPVRILNPQGIVAFEVTPLVYTNVMLRDKSVGAKAATEDQLERLKAIRQLLLKVEAVHAMSWLWASDLPPTTHA--AAEGTGKSTTTSTSLTLMMPILRRRV-QRPRVLPAALFR 1367 KAN LL V PSG T VPLDVA + GH EVVREL Q G R C GG G +DIM +L GVVD G+AL+ AA E +VKFLLQH+A GG Y+N++ D G+TPL+ I+ +SPR AR LIDA ADT S V + TPL + LR VG K ATE+QL LKAI +LL +V+AVHA+SWLW S ++A AA K T L M +LR V +R V+ A++R Sbjct: 155 KANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGC-----------GGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQA--GGGAWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVVLRAVYR 415 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6378.15040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6378.15040.1 >prot_L-elsbetiae_contig6378.15040.1 ID=prot_L-elsbetiae_contig6378.15040.1|Name=mRNA_L-elsbetiae_contig6378.15040.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=272bp MGHVNAIKLLLRAKANPLLTFVRPSGHTHVPLDVAAKGHLEVVRELIQQRback to top mRNA from alignment at L-elsbetiae_contig6378:2029..4695- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6378.15040.1 ID=mRNA_L-elsbetiae_contig6378.15040.1|Name=mRNA_L-elsbetiae_contig6378.15040.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2667bp|location=Sequence derived from alignment at L-elsbetiae_contig6378:2029..4695- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6378:2029..4695- >mRNA_L-elsbetiae_contig6378.15040.1 ID=mRNA_L-elsbetiae_contig6378.15040.1|Name=mRNA_L-elsbetiae_contig6378.15040.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1632bp|location=Sequence derived from alignment at L-elsbetiae_contig6378:2029..4695- (Laminarionema elsbetiae ELsaHSoW15)back to top |