mRNA_L-elsbetiae_contig6237.14834.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6237.14834.1 vs. uniprot
Match: D7FVU0_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU0_ECTSI) HSP 1 Score: 74.7 bits (182), Expect = 1.310e-13 Identity = 40/74 (54.05%), Postives = 45/74 (60.81%), Query Frame = 1 Query: 40 GEVPFNGTPLDFTNHCLREKKVGGVEDAREKQMYRLEAVRRLLLRVEAVHAVSWLWPRETLLASCVAEDSSRTA 261 GEV NGTPL T L EK + E A E+ + RLEA+RRLLLR EAVHAVSWLWP + AE R A Sbjct: 310 GEVQCNGTPLALTTSYLWEKILDNGEPATEEHLQRLEAIRRLLLRAEAVHAVSWLWPSDASFVGHAAEKWPRAA 383
BLAST of mRNA_L-elsbetiae_contig6237.14834.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 72.8 bits (177), Expect = 2.030e-13 Identity = 36/59 (61.02%), Postives = 45/59 (76.27%), Query Frame = 1 Query: 40 GEVPFNGTPLDFTNHCLREKKVGGVEDAREKQMYRLEAVRRLLLRVEAVHAVSWLWPRE 216 G V +N TPL T LREK V G + A E+Q++RL+A+RRLLLRV+AVHAVSWLWP + Sbjct: 102 GGVEYNDTPLAVTTSLLREKVVDG-KPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSD 159
BLAST of mRNA_L-elsbetiae_contig6237.14834.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 67.4 bits (163), Expect = 5.820e-11 Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 25 MSTPGGEVPFNGTPLDFTNHCLREKKVGGVEDAREKQMYRLEAVRRLLLRVEAVHAVSWLWP 210 M+ GG V FN TPL FT LR+K V + A ++ + RLEA+ RLLLRV+AVHAVSWLWP Sbjct: 418 MNLKGGVV-FNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWP 478
BLAST of mRNA_L-elsbetiae_contig6237.14834.1 vs. uniprot
Match: D7G1Y3_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Y3_ECTSI) HSP 1 Score: 66.6 bits (161), Expect = 1.000e-10 Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 1 Query: 40 GEVPFNGTPLDFTNHCLREKKVGGVEDAREKQMYRLEAVRRLLLRVEAVHAVSWLWPRETLLASCVAEDSS 252 G V F+ TPL T LR+ + G +D +E+Q+ RLEAVRRLLLRVEAVHA SW+WP A VA+D++ Sbjct: 268 GLVGFSDTPLCRTIRILRDVETEGKDD-KEEQLGRLEAVRRLLLRVEAVHATSWVWPSSA--AGSVAQDAA 335
BLAST of mRNA_L-elsbetiae_contig6237.14834.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 6.840e-10 Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 1 Query: 61 TPLDFTNHCLREK-KVGGVEDAREKQMYRLEAVRRLLLRVEAVHAVSWLWPRETLLASCVAEDSSRTARKTPASGTQLAL 297 TPL T + +R+K KV G A +Q+++LEA+RRLLLRVEAVHAVSWLWP + S + ++R +T A T + L Sbjct: 333 TPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDI---STITRAAARGTDRTTAISTAVTL 409
BLAST of mRNA_L-elsbetiae_contig6237.14834.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 3.200e-9 Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 55 NGTPLDFTNH-CLREKKVGGVEDAREKQMYRLEAVRRLLLRVEAVHAVSWLWPRETLLASCVAEDSSRTARKTP 273 N TPL++ N LRE G A ++Q+ RLEA RR+LLRV AVHAVSW+WP + L + A +S RTA+ +P Sbjct: 305 NVTPLEYVNDWALRE--TNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPA-NSPRTAKHSP 375
BLAST of mRNA_L-elsbetiae_contig6237.14834.1 vs. uniprot
Match: A0A6H5KJ94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ94_9PHAE) HSP 1 Score: 59.3 bits (142), Expect = 1.730e-8 Identity = 30/72 (41.67%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 61 TPLDFTNHCLREKKVGGVEDAREKQMYRLEAVRRLLLRVEAVHAVSWLWP-RETLLASCVAEDSSRTARKTP 273 TP++ + KKV G ED ++Q+ +EA+RRLLL+VEA+ A++ LWP +A AE + RT+R P Sbjct: 140 TPMEIAMRRILRKKVEGKEDINDEQLRSVEAIRRLLLQVEAIRAIACLWPGNNPSVAHAAAEGTGRTSRARP 211
BLAST of mRNA_L-elsbetiae_contig6237.14834.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI) HSP 1 Score: 56.6 bits (135), Expect = 3.440e-7 Identity = 35/77 (45.45%), Postives = 43/77 (55.84%), Query Frame = 1 Query: 49 PFNGTPL-------DFTNHCLREKKVGGVEDAREKQMYRLEAVRRLLLRVEAVHAVSWLWPRETLLASCVAEDSSRT 258 PF TPL +H L E +V G D E+Q ++L AV RLLLRVEAVHA SWLW + + AE + RT Sbjct: 285 PFGRTPLLCSIEDEGLVDHYLGENRVIG-RDITEEQAHKLNAVHRLLLRVEAVHAASWLWVSDAPDIAHTAEVTKRT 360
BLAST of mRNA_L-elsbetiae_contig6237.14834.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI) HSP 1 Score: 55.8 bits (133), Expect = 6.070e-7 Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = 1 Query: 16 DFTMSTPGGEVPF--NGTPLDFTNHCLREKKVGGVEDAREKQMYRLEAVRRLLLRVEAVHAVSWLWPRETLLASCV---AEDSSRTARKTPASGTQLAL 297 D T + P +P N TP+ T L + G E E+Q+ LEA+ RLLLRVEA+HAVSWLW + + +C A+ + RT K+ A GT L L Sbjct: 214 DTTSTVPIDGLPGTDNITPMGLTMLLLHDL---GTEPLTEEQLNALEAIHRLLLRVEALHAVSWLWSSD--ICNCTYSTAQGTDRTTSKSTA-GTPLVL 306
BLAST of mRNA_L-elsbetiae_contig6237.14834.1 vs. uniprot
Match: A0A6H5KSA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA9_9PHAE) HSP 1 Score: 54.7 bits (130), Expect = 1.730e-6 Identity = 26/57 (45.61%), Postives = 39/57 (68.42%), Query Frame = 1 Query: 52 FNGTPLDFTNHCLREKKVGGVEDAREKQMYRLEAVRRLLLRVEAVHAVSWLWPRETL 222 F GTPL +T LR+++ G+ D+ + + LEAVRR+LL++EA+ AVSW W + L Sbjct: 493 FRGTPLAYTTWLLRDQQARGI-DSTKGEPCSLEAVRRMLLQLEAIRAVSWCWQSDAL 548 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6237.14834.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6237.14834.1 >prot_L-elsbetiae_contig6237.14834.1 ID=prot_L-elsbetiae_contig6237.14834.1|Name=mRNA_L-elsbetiae_contig6237.14834.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp MSTPGGEVPFNGTPLDFTNHCLREKKVGGVEDAREKQMYRLEAVRRLLLRback to top mRNA from alignment at L-elsbetiae_contig6237:7093..7392+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6237.14834.1 ID=mRNA_L-elsbetiae_contig6237.14834.1|Name=mRNA_L-elsbetiae_contig6237.14834.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=300bp|location=Sequence derived from alignment at L-elsbetiae_contig6237:7093..7392+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6237:7093..7392+ >mRNA_L-elsbetiae_contig6237.14834.1 ID=mRNA_L-elsbetiae_contig6237.14834.1|Name=mRNA_L-elsbetiae_contig6237.14834.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=552bp|location=Sequence derived from alignment at L-elsbetiae_contig6237:7093..7392+ (Laminarionema elsbetiae ELsaHSoW15)back to top |