mRNA_L-elsbetiae_contig6237.14833.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6237.14833.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 6.870e-16 Identity = 40/57 (70.18%), Postives = 48/57 (84.21%), Query Frame = 2 Query: 92 IPPAQPHWPRGPSKNELHAAAYHGSTERTIALLSRGLINIDQGEPEGFTPLMLAAQR 262 I PAQ WPRGP KNELH AA GST+RT A+LS GLINI+QG+P+G+TPLM+A+QR Sbjct: 2 IMPAQEKWPRGP-KNELHFAADTGSTQRTAAILSSGLININQGDPDGWTPLMVASQR 57
BLAST of mRNA_L-elsbetiae_contig6237.14833.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 69.7 bits (169), Expect = 5.330e-12 Identity = 31/50 (62.00%), Postives = 41/50 (82.00%), Query Frame = 2 Query: 113 WPRGPSKNELHAAAYHGSTERTIALLSRGLINIDQGEPEGFTPLMLAAQR 262 WPRGP+ N+LH AAYHGS +R ALLS G ++I+QG P+G+TPLMLA ++ Sbjct: 28 WPRGPT-NQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEK 76
BLAST of mRNA_L-elsbetiae_contig6237.14833.1 vs. uniprot
Match: D7G1Y7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Y7_ECTSI) HSP 1 Score: 68.6 bits (166), Expect = 5.430e-12 Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 2 Query: 113 WPRGPSKNELHAAAYHGSTERTIALLSRGLINIDQGEPEGFTPLMLAA 256 WPRGP +NELH AA+ GS +RT ALLS G ++++QG+P GFTPLMLA+ Sbjct: 5 WPRGP-RNELHEAAHFGSADRTRALLSSGAVDVNQGDPAGFTPLMLAS 51
BLAST of mRNA_L-elsbetiae_contig6237.14833.1 vs. uniprot
Match: D7FN71_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN71_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 7.260e-12 Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 2 Query: 98 PAQPHWPRGPSKNELHAAAYHGSTERTIALLSRGLINIDQGEPEGFTPLMLAAQR 262 P P W RGP NELH AA GS ER +LL+RG+INI+QG+P G TPLM AAQ+ Sbjct: 3 PTPPKWSRGPL-NELHQAAIRGSAERINSLLTRGVININQGDPAGRTPLMCAAQK 56
BLAST of mRNA_L-elsbetiae_contig6237.14833.1 vs. uniprot
Match: A0A6H5JKV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKV7_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 1.610e-11 Identity = 33/55 (60.00%), Postives = 40/55 (72.73%), Query Frame = 2 Query: 98 PAQPHWPRGPSKNELHAAAYHGSTERTIALLSRGLINIDQGEPEGFTPLMLAAQR 262 P P PRGP NELH AA G TER ++L+RG+INI+QG+P G TPLM AAQ+ Sbjct: 3 PTPPKLPRGPL-NELHQAAMRGFTERINSVLTRGVININQGDPTGRTPLMCAAQK 56
BLAST of mRNA_L-elsbetiae_contig6237.14833.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 59.7 bits (143), Expect = 1.800e-8 Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 2 Query: 119 RGPSKNELHAAAYHGSTERTIALLSRGLINIDQGEPEGFTPLMLAAQ 259 RGP +NELH AA GS++RT +LL+ G I+IDQG+P G+TPLM AA+ Sbjct: 9 RGP-RNELHKAALDGSSQRTESLLAGGRIDIDQGDPRGWTPLMFAAE 54
BLAST of mRNA_L-elsbetiae_contig6237.14833.1 vs. uniprot
Match: Q8QN90_ESV1K (EsV-1-199 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN90_ESV1K) HSP 1 Score: 55.5 bits (132), Expect = 5.580e-7 Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 2 Query: 116 PRGPSKNELHAAAYHGSTERTIALLSRGLINIDQGEPEGFTPLMLAA 256 PRGP LH+AA HGS E+ ++S G + I+QG PEG+TPLMLAA Sbjct: 9 PRGPW-TALHSAANHGSFEQVFGIVSSGSVQINQGSPEGWTPLMLAA 54
BLAST of mRNA_L-elsbetiae_contig6237.14833.1 vs. uniprot
Match: D7G1Y3_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Y3_ECTSI) HSP 1 Score: 54.3 bits (129), Expect = 1.410e-6 Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = 2 Query: 80 MPSAIPPAQPHWPRGPSKNELHAAAYHGSTERTIALLSRGLINIDQGEPEGFTPLMLA 253 MPS PP Q PRG ++NELH AA + +ALL G ++IDQG+P G+TPLM A Sbjct: 1 MPSVAPPKQS--PRG-NRNELHDAADNDLIAEVLALLRGGSVDIDQGDPHGWTPLMFA 55
BLAST of mRNA_L-elsbetiae_contig6237.14833.1 vs. uniprot
Match: D8LPL4_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL4_ECTSI) HSP 1 Score: 52.8 bits (125), Expect = 4.970e-6 Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 2 Query: 113 WPRGPSKNELHAAAYHGSTERTIALLSRGLINIDQGEPEGFTPLMLAA 256 +PRGP LH+AA GS E+ ++S G + I+QG PEG+TPLMLAA Sbjct: 8 YPRGPW-TALHSAANDGSFEQVFGIVSSGSVQINQGSPEGWTPLMLAA 54
BLAST of mRNA_L-elsbetiae_contig6237.14833.1 vs. uniprot
Match: D7FXH6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH6_ECTSI) HSP 1 Score: 52.8 bits (125), Expect = 5.030e-6 Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 2 Query: 128 SKNELHAAAYHGSTERTIALLSRGLINIDQGEPEGFTPLMLAAQ 259 S +LH AA G +RT+ALLSR L N+DQ + +GFTPL+ AAQ Sbjct: 2 SWTDLHQAAARGMVQRTLALLSRPLANVDQRDNDGFTPLIAAAQ 45 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6237.14833.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6237.14833.1 >prot_L-elsbetiae_contig6237.14833.1 ID=prot_L-elsbetiae_contig6237.14833.1|Name=mRNA_L-elsbetiae_contig6237.14833.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=61bp MPSAIPPAQPHWPRGPSKNELHAAAYHGSTERTIALLSRGLINIDQGEPEback to top mRNA from alignment at L-elsbetiae_contig6237:6030..6291+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6237.14833.1 ID=mRNA_L-elsbetiae_contig6237.14833.1|Name=mRNA_L-elsbetiae_contig6237.14833.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=262bp|location=Sequence derived from alignment at L-elsbetiae_contig6237:6030..6291+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6237:6030..6291+ >mRNA_L-elsbetiae_contig6237.14833.1 ID=mRNA_L-elsbetiae_contig6237.14833.1|Name=mRNA_L-elsbetiae_contig6237.14833.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=366bp|location=Sequence derived from alignment at L-elsbetiae_contig6237:6030..6291+ (Laminarionema elsbetiae ELsaHSoW15)back to top |