mRNA_L-elsbetiae_contig6107.14661.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6107.14661.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 207 bits (527), Expect = 4.590e-59 Identity = 149/319 (46.71%), Postives = 196/319 (61.44%), Query Frame = 2 Query: 242 ASSGCGGRSEVMAALIEAGANVDSRARDGSTPLYTAAGGGHLNAVRKLLRAKADPLLMRSLPSG-ETLVPLDVAAINGYSKVVRELIQQFGIEGCAGASGGVVALGAAARESHVHIMFMLTNAGVVDTGLALVSAAEWSIPVAAAAAAGVPDRLSGIRQHPQSER------LHGLGAPLLPS------PRVVRLLVDAGADTTSDVRVTGESGVVHNIGTPLAHTNALLGHKKIRGLDATEEQLHRLEALRRLLLRVEAACAVSWLWPGDVPSVAKA-AGDTGKTATTTPANGTQLMILMLPILRRRGRGALLAPLVRW 1156 A +GC + + AL++AG+N+++R DG+TPLYTAA G++ AV LL AKADPLL + SG E +PLDVAA NG+ +VV ELI+Q GI+GC G+SGG AL AA S + IM +LT+AGVVDTGLALV AA + A + L R ++R L+G+G L PRVV+LLV+AGADTTS V + + G TPL T LLG + + L T E+ ++LE +RRLLLR EA AVSWLWP D P++ A A TG+T T+ A T ++LM+ R RGR LLA L+R+ Sbjct: 123 AETGC---AASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYG------GEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRSAKPL--TMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTA-ATPFIMLMIGR-RTRGRKGLLAALLRY 428
BLAST of mRNA_L-elsbetiae_contig6107.14661.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 202 bits (514), Expect = 2.510e-57 Identity = 146/300 (48.67%), Postives = 184/300 (61.33%), Query Frame = 2 Query: 302 NVDSRARDGSTPLYTAAGGGHLNAVRKLLRAKADPLLMRSL-PSGETLVPLDVAAINGYSKVVRELIQQFGIEGCAGASGGVVALGAAARESHVHIMFMLTNAGVVDTGLALVSAAEWS------IPVAAAAAAGVPDRLSGIRQHPQSERLHGLGAPLLPS-----PRVVRLLVDAGADTTSDVRVTGESGVVHNIGTPLAHT-NALLGHKKIRGLD-ATEEQLHRLEALRRLLLRVEAACAVSWLWPGDVPSVAKAAGDTGKTATTTPANGTQLMILMLPILRR-RGRGALLAPLVRW 1156 N++SR DG+TPLYTAA G+++A R LL AKADPLL PSG T +PLD AA NG+ +VV ELI+Q GI+GC G+SGGV AL AA+ +++IM +LTNAGVVDTGLALV AA + + A A D + + + R G PLL PRVVRLLV+AGADTTS V V + G TPL T N + K+ G A+ EQLH+LEA+RRLLLRVEA AVSWLWP D+ ++ +AA + T A T + + ML RR RGR LA L+R+ Sbjct: 140 NLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYV-----NTRDRGGVTPLLWGIQHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAA---RGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRY 431
BLAST of mRNA_L-elsbetiae_contig6107.14661.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI) HSP 1 Score: 194 bits (493), Expect = 2.200e-55 Identity = 138/299 (46.15%), Postives = 176/299 (58.86%), Query Frame = 2 Query: 275 MAALIEAGANVDSRARDGSTPLYTAAGGGHLNAVRKLLRAKADPLLMRSLPSGETL-VPLDVAAINGYSKVVRELIQQFGIEGCAGASGGVVALGAAARESHVHIMFMLTNAGVVDTGLALVSAAEWSIPVAAAAAAGVPDRLSG---IRQHPQSERLHGLGA-PLLPSPRVVRLLVDAGADTTSDVRVTGESGVVHNIGTPLAHTNALLGHKKIRGLDATEEQLHRLEALRRLLLRVEAACAVSWLWPGDVPSVAKAAGDTGKTATTTPANGTQLMILMLPILRRRGRGALLAPLVRW 1156 M L+EAGAN++SR DG+TPL+ AA G+++AVR LL AK DPLL L + E +PLDVAA G+ +VV ELI+Q GI GC G+SGGV AL AAR H+ ++ +LTNAGVVDTGLA P+ + AG + G + +HPQ R + PRVVRLLV+AGADTTS V + G G NI TP+ T LL L TEEQL+ LEA+ RLLLRVEA AVSWLW D+ + + T+ GT L++ M R + R LA L+R+ Sbjct: 33 MTTLLEAGANLNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDTGLARGRRIWRRGPLEVSVGAGKGEENHGWTCVCEHPQRCRFDAIACWHQRCRPRVVRLLVEAGADTTSTVPIDGLPGT-DNI-TPMGLTMLLLHDLGTEPL--TEEQLNALEAIHRLLLRVEALHAVSWLWSSDICNCTYSTAQGTDRTTSKSTAGTPLVLTMRQRARSKEREVPLAALLRY 327
BLAST of mRNA_L-elsbetiae_contig6107.14661.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 182 bits (461), Expect = 9.350e-49 Identity = 137/310 (44.19%), Postives = 174/310 (56.13%), Query Frame = 2 Query: 302 NVDSRARDGSTPLYTAAGGGHLNAVRKLLRAKADPLLMRSLPSGETL-VPLDVAAINGYSKVVRELIQQFGIEGCAGASGGVVALGAAARESHVHIMFMLTNAGVVDTGLALVSAAEWSIPVAAAAAAGVPDRLSGIRQHPQSERLHGL-GA-----------PLL--------PSPRVVRLLVDAGADTTSDVRVTG-ESGVVHNIGTPLAHTNALLGHKKIR-GLDATEEQLHRLEALRRLLLRVEAACAVSWLWPGDVPSVAKAAGDTGKTATTTPANGTQLMILMLPILRRRG--RGALLAPLVRW 1156 N D + DGST L+ AA G + +R+LLR A+PLL+++ P G T VPLD+AA +G++ VVRELIQ+ GIEGC S G AL AA H+ IM +LT AGVVDTG AL AA G + + +H E G+ GA PL+ +PR+VR+LVDAGADTTS V+V + GVV N TPLA T L K + G AT+E L RLEA+ RLLLRV+A AVSWLWP P + G+ T P + LMLPIL+RR R L+A L+R+ Sbjct: 232 NPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGM----------GHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFN-DTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFI-------GRATETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRY 523
BLAST of mRNA_L-elsbetiae_contig6107.14661.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 169 bits (429), Expect = 5.380e-45 Identity = 132/300 (44.00%), Postives = 162/300 (54.00%), Query Frame = 2 Query: 302 NVDSRAR-DGSTPLYTAAGGGHLNAVRKLLRAKADPLLMRS-LPSGETLVPLDVAAINGYSKVVRELIQQFGIEGCAGASGGVVALGAAARESHVHIMFMLTNAGVVDTGLALVSAAEWSIPVAAAAAAGVPDRLSGIRQHPQSERLHGLGA-----------PLLPS------------PRVVRLLVDAGADTTSDVRVTGESGVVHNIGTPLAHTNALLGHKKIRGLDATEEQLHRLEALRRLLLRVEAACAVSWLWPGDVPSVAKAAGDTGKTATTTPANGTQLMILMLPILRRRGR 1126 NVD R DG TPL+ A G L A R+LLRA A+PL+ R+ LP TL+PLD AA NG V+RELIQ+ GIEGC G S G VAL A V M +LT+AGVVDTG AL +I A V L +H +G GA PLL S PRV RLLV+AGADTT+++R T GVV TPL T +L KK+ G ++++L RLE +RRLLL+VEA A SWLWP + + + T T A +L +LPILRRR R Sbjct: 125 NVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAPLP---TLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQAL------TISAGLGREASVKYLLQNHAKH------YGPGAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLG-RVLPILRRRAR 408
BLAST of mRNA_L-elsbetiae_contig6107.14661.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 166 bits (421), Expect = 1.140e-43 Identity = 115/258 (44.57%), Postives = 140/258 (54.26%), Query Frame = 2 Query: 389 RAKADPLLMRSLPSGETLVPLDVAAINGYSKVVRELIQQFGIEGCAGASGGVVALGAAARESHVHIMFMLTNAGVVDTGLALVSAAEWS----IPVAAAAAAGVPDRLSGIRQHPQSERLH-------GLGAPLLPSPRVVRLLVDAGADTTSDVRVTGESGVVHNIGTPLAHTNALLGHKKIRGLDATEEQLHRLEALRRLLLRVEAACAVSWLWPGDVPSVAKAAGDTGKTATTTPANGTQLMILMLPILRRRGRG 1129 RAKA+PLL R + + L PLD AA NG VV EL+Q+FGI GC G +GGV AL AA + H+ +M LT AGVVDTG+ALV A + + G P S P+ +G SP+VVRLLVDAGADTTS VR T + G + + TPL+ L K +E L RLE +RRLLLRVEA A SWLW VP V AG T T T + + + +LPILRRR RG Sbjct: 168 RAKANPLLTRVNLAWQHL-PLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARG 424
BLAST of mRNA_L-elsbetiae_contig6107.14661.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 165 bits (417), Expect = 3.770e-43 Identity = 129/272 (47.43%), Postives = 159/272 (58.46%), Query Frame = 2 Query: 383 LLRAKADPLLMRSLPSGETLVPLDVAAINGYSKVVRELIQQFGIEGCAGASGGVVALGAAARESHVHIMFMLTNAG-VVDTGLALVSAAEWSIPVA---------AAAAAGVPDRLSGIRQHPQSERLHGLGAPLLPSPRVVRLLVDAGADTTSDVRVTGESGVVHNIG-TPLAHTNALLGHKKIRGLDATEEQLHRLEALRRLLLRVEAACAVSWLWP-GDVPSVAKAAGDTGKTATTTPANGTQLMILMLPILRRRG--RGALLAPLVRW 1156 LLRAKA+PLL P G + VPL++AA++G V RE+I+Q GI GC G SGGV AL AA E H+ M +L +AG VVDTG AL+ AAE VA A A A V + P + +GA L SP++VRLLVDAGA+TT V VT + TPLA T LL ++ G AT+EQL RL+ R LL R EA AVSWLW G+ P +A+AAGDT KT T + A T L M P+LRR+ RG LL L R+ Sbjct: 164 LLRAKANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADADAYVNGTRDPYGRTPVMCAVD-VGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDT-KTETASTAVATPLRA-MSPMLRRKPGTRGVLLKTLFRY 432
BLAST of mRNA_L-elsbetiae_contig6107.14661.1 vs. uniprot
Match: A0A6H5JWZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ8_9PHAE) HSP 1 Score: 149 bits (377), Expect = 3.550e-38 Identity = 122/305 (40.00%), Postives = 161/305 (52.79%), Query Frame = 2 Query: 242 ASSGCGGRSEVMAALIEAGANVDSRARDGSTPLYTAAGGGHLNAVRKLLRAKADPLLMRSLPSGETLVPLDVAAINGYSKVVRELIQQFGIEGCAGASGGVVALGAAARESHVHIMFMLTNAGVVDTGLALVSAAEWSIPVAAAAAAGVPDRLSGIRQHPQSERLHGLGAPLLPSPRVVRLLVDAGADTTSDVRVTGESGVVHNIGTPLAHTNALLGHKKIRGLDATEEQLHRLEALRRLLLRVEAACAVSWLWPGDVPSVAKAAGDTGKTATTTPANGTQLMILMLPILRRRGRGALLAPLVRW 1156 A+S G R +AA I A + + + P+ TAA GH+ AVR LRAKA+ LL+R S ++ VPLD AA G S VVREL+ Q GI+GC G S G AL AA+E V M +L AG+VDTG+AL+ A + ++ + R S + +P + G PR+VR++VDA ADTTS VRV + G++ TPL GL H+L A+ RLLLRVEA A SWLW D P +A A T +T PA L +L L R ALL+ ++RW Sbjct: 58 ATSSNGSRPRHLAADIGHAAVIKALRQ---APISTAA--GHVEAVRAFLRAKANSLLIRLNASRDSFVPLDAAAGKGRSLVVRELLGQLGIDGCGGPSRGPHALYHAAKEQFVDTMAVLATAGMVDTGIALIGAIKENLE----GSIKFLLRQSSCKGNPPVPTIEDEGGRWC-FPRIVRMIVDAVADTTSAVRVL-KLGLLPVKETPL-------------GL------AHKLSAVHRLLLRVEALHAASWLWVSDAPDIAHTAEVTKRTKVIPPARSRMLPVLGLST----RRNALLSAVLRW 328
BLAST of mRNA_L-elsbetiae_contig6107.14661.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 143 bits (360), Expect = 4.850e-35 Identity = 118/262 (45.04%), Postives = 136/262 (51.91%), Query Frame = 2 Query: 404 PLLMRSLPSGETLVPLDVAAINGYSKVVRELIQQFGIEGCAGASGGVVALGAAARESHVHIMFMLTNAGVVDTGLALVSAAEWSIPVAAA---AAAGVPDRLSGIRQHPQSERLHGLGAPLLP-------SPRVVRLLVDAGADTTSDVRVTGESGVVHNIGTPLAHTNALLGHKKIRGLDATEEQLHRLEALRRLLLRVEAACAVSWLWPGDVPSVAKAAGDTGKTATTTPANGTQLMILMLPILRRRG--RGALLAPLVR 1153 PLL + SG T VPLD AA+NG+ V REL+Q+FGI GCAGAS GV ALG AA + H+ +M +L +AGVVDTG ALV+ A G + P+ R H PLL SPRVVRLLVDAGAD T VRV G TPL L K + AT +QL L A RRLLL+VE A SWLW G A A G K A T NG L LPI+ RR RGA L + R Sbjct: 170 PLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGH---TPLLSAVTTGPCSPRVVRLLVDAGADATLAVRVPDGFGRSTKY-TPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPA-APGK--KRAQTESTNGKPLKS-RLPIMWRRSARRGAALPGVFR 423
BLAST of mRNA_L-elsbetiae_contig6107.14661.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 140 bits (354), Expect = 2.360e-34 Identity = 121/270 (44.81%), Postives = 155/270 (57.41%), Query Frame = 2 Query: 386 LRAKADPLLM-RSLPSGETLVPLDVAAINGYSKVVRELIQQFGIEGCAGASGGVVALGAAARESHVHIMFMLTNAGVVD-TGLALVSAAEWSIPVAAAAAAGVPDRLSGIRQHPQSERLH------GLGAPLLP---------SPRVVRLLVDAGADTTSDVRVTGE-SGVVHNIGTPLAHTNALLGHKKIRGLDATEEQLHRLEALRRLLLRVEAACAVSWLWPGDVPSVAKAAGDTGKTATTTPANGTQLMILMLPILRRR-GRGALL 1138 L AKA+PLL S SG + VPL+VAA G S VV EL+++FGI C G SGG+ AL AA V IM ML +AGVVD GLAL++A V + A V L + Q+ ++ GL A L +PR+ R LVDAGADTTS V++ + S N+ TPL + N + AT+EQL RLEA RR+LLRV A AVSW+WP D P +A+ A ++ +TA +P TQL + LP+LRRR GR ALL Sbjct: 138 LHAKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAA------VGSGKEAAVGFLLRQQEERWQTSYVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNV-TPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPA-NSPRTAKHSP---TQLTTV-LPVLRRRAGRRALL 395 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6107.14661.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6107.14661.1 >prot_L-elsbetiae_contig6107.14661.1 ID=prot_L-elsbetiae_contig6107.14661.1|Name=mRNA_L-elsbetiae_contig6107.14661.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=343bp MLAGNISCIRSTRTPRRDHRSGQGWRRSGSKELRRWHTASSGCGGRSEVMback to top mRNA from alignment at L-elsbetiae_contig6107:10072..11278+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6107.14661.1 ID=mRNA_L-elsbetiae_contig6107.14661.1|Name=mRNA_L-elsbetiae_contig6107.14661.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1207bp|location=Sequence derived from alignment at L-elsbetiae_contig6107:10072..11278+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6107:10072..11278+ >mRNA_L-elsbetiae_contig6107.14661.1 ID=mRNA_L-elsbetiae_contig6107.14661.1|Name=mRNA_L-elsbetiae_contig6107.14661.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2058bp|location=Sequence derived from alignment at L-elsbetiae_contig6107:10072..11278+ (Laminarionema elsbetiae ELsaHSoW15)back to top |