mRNA_L-elsbetiae_contig6038.14576.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6038.14576.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 556 bits (1434), Expect = 7.440e-195 Identity = 283/414 (68.36%), Postives = 325/414 (78.50%), Query Frame = 1 Query: 1 NGSTFYCKGTINPDGDCDELRIQSNNETDWYEVRGHGGSLYFKDTVVTSWDTELKAPQEEYEGGRSFLNCVSEKLATSGTGTNCTGEAKDEKGECRMDIINSEMGYMGWFDSESYGLTWKVR---------GFCKNLSNHEVFTTTNVYGDINGSNIHHMYYGMYSYGHEGGVWTNNKMHHNHQYGFDPHDDSDYLTIAHNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDNALVHGNTITNMKDAGIALLESMNADIYDNVIDGAQYGIRMSLGSAGNFVHDNSFNACSDYGLFTYEGSDPPTEGVSDGRPFFNTFEANQVTNSAGSVKIKYTDSMVISDNVFSGTPNIEIEFFDAQDTTWTNNEIPSTGVCVDNVLSDKGVDVPLSSFAASDGLPSEEC 1215 NG+ FYC G+ GDCDELRIQS DWYEVRGHGGS+YF TVVTSWDT K PQE YEGGRSFLNCVSEKL TG C G AK++ GECRMDIINSEMGYMG+FDSESYGLTWKVR GFCK+LSN +VF TTNVYGDI S+IHHMYYG YSYGH+GGVWTNN+MH NHQY +A+NKVYNN+NHGIIASKRCN+V+IYDN+VSDGGPDAVGIFLHRSSDNA V+GN I NM DAGIALLES NADI+DN IDG Q+GIRMSLGS GN V+DN FN CSD+GL+TY GSD P VS+GRP NTF N+VTNSAG VK K +D++V+++N F+GT E+EF+DAQ TTW+ N +PS GVC+DN+ SD G VP S+F++S G+PSEEC Sbjct: 74 NGAIFYCIGS-EEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKL----TGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPD--VSNGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTE--ELEFYDAQATTWSGNSLPS-GVCIDNITSDDGNSVPPSTFSSSSGVPSEEC 465
BLAST of mRNA_L-elsbetiae_contig6038.14576.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 511 bits (1317), Expect = 3.180e-176 Identity = 257/405 (63.46%), Postives = 310/405 (76.54%), Query Frame = 1 Query: 4 GSTFYCKGTINPDGDCDELRIQSNNETDWYEVRGHGGSLYFKDTVVTSWDTELKAPQEEYEGGRSFLNCVSEKLATSGTGTNCTGEAKDEKGECRMDIINSEMGYMGWFDSESYGLTWKVRGFCKNLSNHEVFTTTNVYGDINGSNIHHMYYGMYSYGHEGGVWTNNKMHHNHQYGFDPHDDSDYLTIAHNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDNALVHGNTITNMKDAGIALLESMNADIYDNVIDGAQYGIRMSLGSAGNFVHDNSFNACSDYGLFTYEGSDPPTEGVSDGRPFFNTFEANQVTNSAGSVKIKYTDSMVISDNVFSGTPNIEIEFFDAQDTTWTNNEIPSTGVCVDNVLSDKGVDVPLSSF-AASDGLPSEEC 1215 G+ FYC+G+ + GDCDELRIQS TD++EVR HGGS+YF+ T+VTSWDT K PQ Y GGRSFLNCVSEKL TG C G+A++E GECRMDIINSE+GY+G+FDSESYGLTWKVRGFCK+LSN +VF TTNVYG++ GS+IHH YYG YSYGH+GGVW NN+MH NHQYGFDPHDDSDYLT IIASKRCN+VQIY+NEV DGGP A GIFLHRSSD A+VH N + +M+DAG+A+LESMNADIY+N ++GIR+SLGS+ N VH+N F S GL+TY+GSD PT+GVSDGRP N FE N++ N VKIK D VI+DNVF+GT E+EFFDAQ+T W N +P GVC+ N+ SD G+D+ LS+F + GLP+ EC Sbjct: 139 GAVFYCRGS-SIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKL----TGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTS--ELEFFDAQNTRWKGNTLPQ-GVCIKNIHSDDGIDIELSTFDRRTAGLPTLEC 523
BLAST of mRNA_L-elsbetiae_contig6038.14576.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 486 bits (1250), Expect = 2.870e-161 Identity = 246/371 (66.31%), Postives = 286/371 (77.09%), Query Frame = 1 Query: 4 GSTFYCKGTINPDGDCDELRIQSNNETDWYEVRGHGGSLYFKDTVVTSWDTELKAPQEEYEGGRSFLNCVSEKLATSGTGTNCTGEAKDEKGECRMDIINSEMGYMGWFDSESYGLTWKVRGFCKNLSNHEVFTTTNVYGDINGSNIHHMYYGMYSYGHEGGVWTNNKMHHNHQYGFDPHDDSDYLTIAHNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDNALVHGNTITNMKDAGIALLESMNADIYDNVIDGAQYGIRMSLGSAGNFVHDNSFNACSDYGLFTYEGSDPPTEGVSDGRPFFNTFEANQVTNSAGSVKIKYTDSMVISDNVFSGTPNIE-IEFFDAQDTTWTNNEI 1113 G FYCKGT + GDC++LRIQS D++EVRGHGGSLYF+DT+VTSWDT K PQE YE GRSFLNCVSEKL TG +C G AK+E GECRMDIINSE+ Y+G+FDSESYG+TWKVRGFCK+LSN EVF TNVYGD+ GS+IHH+YYG YSYGH+GGVWTNNKMH N QYGFDPHDDSDYLTIA+N+VYNN NHGIIASKRCN+V+I++NEV DGG A GIFLHRSSD A V NTITNM+DAGIA+LES +A IY N+I+GA+YGIRMSLGS N V+ NSF S YGL+TYEGSD P VSDGRP N N V + VKIK D N F N++ EF ++ +T W+ N+I Sbjct: 502 GGVFYCKGT-SAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKL----TGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPD--VSDGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFI---NVDAFEFPESTNTMWSGNDI 862
BLAST of mRNA_L-elsbetiae_contig6038.14576.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 460 bits (1183), Expect = 4.900e-157 Identity = 236/402 (58.71%), Postives = 295/402 (73.38%), Query Frame = 1 Query: 4 GSTFYCKGTINPDGDCDELRIQSNNETDWYEVRGHGGSLYFKDTVVTSWDTELKAPQEEYEGGRSFLNCVSEKLATSGTGTNCTGEAKDEKGECRMDIINSEMGYMGWFDSESYGLTWKVRGFCKNLSNHEVFTTTNVYGDINGSNIHHMYYGMYSYGHEGGVWTNNKMHHNHQYGFDPHDDSDYLTIAHNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDNALVHGNTITNMKDAGIALLESMNADIYDNVIDGAQYGIRMSLGSAGNFVHDNSFNACSDYGLFTYEGSDPPTEGVSDGRPFFNTFEANQVTNSAGSVKIKYTDSMVISDNVFSGTPNIEIEFFDAQDTTWTNNEIPSTGVCVDNVLSDKGVDVPLSSFAASDGLPSE 1209 G+T YC+G G+C ELRI+S + +D++E+RGHGG+LYF+DT+VTSWD + + PQE Y+ GRSF+ CVSE L T C A + GECRMDII+SEMGY+G+ SE+YG+TWKVRGFC +LSN +VF NVYGD+ GS+IHHMYYGMYS+GH+GGVWTNN MH NHQYGFDPHDDSDYL IA NKVYNN NHGIIASKRCN+V+IYDNEV DGG DA GIFLHRS D++ V+GNTITNM DAGIA+LE+ DI+DN +DG ++GIR+ LGS+ N VHDN F + G+FTY GSD P G GRP N F N + + VKIK +D++ I++N FSGT EIEF +A D W+ N IP T C++++ ++ S+F S GLP E Sbjct: 64 GATLYCRGK-GVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDT---C---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG--GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTT--EIEFNNAIDIVWSGNSIP-TNTCLEDIDNN-------STFTGSSGLPLE 446
BLAST of mRNA_L-elsbetiae_contig6038.14576.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 455 bits (1171), Expect = 2.090e-156 Identity = 242/405 (59.75%), Postives = 278/405 (68.64%), Query Frame = 1 Query: 1 NGSTFYCKGTINPDGDCDELRIQSNNETDWYEVRGHGGSLYFKDTVVTSWDTELKAPQEEYEGGRSFLNCVSEKLATSGTGTNCTGEAKDEKGECRMDIINSEMGYMGWFDSESYGLTWKVRGFCKNLSNHEVFTTTNVYGDINGSNIHHMYYGMYSYGHEGGVWTNNKMHHNHQYGFDPHDDSDYLTIAHNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDNALVHGNTITNMKDAGIALLESMNADIYDNVIDGAQYGIRMSLGSAGNFVHDNSFNACSDYGLFTYEGSDPPTEGVSDGRPFFNTFEANQVTNSAGSVKIKYTDSMVISDNVFSGTPNIEIEFFDAQDTTWTNNEIPSTGVCVDNVLSDKGVDVPLSSFAASDGLPSEEC 1215 +G+ FYC G+ GDCDELRIQS DWYEVRGHGGS+YF TVVTSWDT K PQE YEGGRSFLNCVSEKL TG C G+AK+++GECRMDIINSEMGYMG+FD+ESYGLTWKVRGFCK+LSN +VF TTNVYGDI SNIHHMYYGMYSYGH+GGVWTNN+MH NHQYGFDPHDDSDYLTIA ASKRCN+VQIY+NEVSDGGP+AVGIFLHRSSDNA V+G G D P VS+GRP NTF N++TN+AG VKIK +D++VIS+N F+GT E+EFFDAQ TTW++N +PS GVC+DNV SD G VP S+F++S G+PSEEC Sbjct: 29 DGAIFYCIGS-EEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKL----TGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPD--VSNGRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTE--ELEFFDAQATTWSDNSLPS-GVCIDNVTSDDGNSVPPSTFSSSSGVPSEEC 368
BLAST of mRNA_L-elsbetiae_contig6038.14576.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 404 bits (1039), Expect = 1.430e-136 Identity = 205/301 (68.11%), Postives = 234/301 (77.74%), Query Frame = 1 Query: 4 GSTFYCKGTINPDGDCDELRIQSNNETDWYEVRGHGGSLYFKDTVVTSWDTELKAPQEEYEGGRSFLNCVSEKLATSGTGTNCTGEAKDEKGECRMDIINSEMGYMGWFDSESYGLTWK--------VRGFCKNLSNHEVFTTTNVYGDINGSNIHHMYYGMYSYGHEGGVWTNNKMHHNHQYGFDPHDDSDYLTIAHNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDNALVHGNTITNMKDAGIALLESMNADIYDNVIDGAQYGIRMSLGSAGNFVHDNSFNACS 882 G FYCKGT + GDC++LRIQS D++EVRGHGGSLYF+DT+VTSWDT K PQE YEGGRSFLNCVSEKL TG +C G AK+E GECRMDIINSE+ Y+G+FDSESYG+TWK VRGFCK+LSN EVF TNVYGD+ GS+IHH+YYG YSYGH+GGVWTNNKMH N QYGFDPHDDSDYLT IIASKRCN+V+I++NEV DGG AVGIFLHRSSD+A V NTITNM+DAGIALLE+ +A IY N I+GA+YGIRMSLGS N V+ NSF S Sbjct: 51 GGVFYCKGT-SAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKL----TGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTR------------IIASKRCNNVKIFENEVRDGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDIS 334
BLAST of mRNA_L-elsbetiae_contig6038.14576.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 383 bits (984), Expect = 1.850e-124 Identity = 210/388 (54.12%), Postives = 264/388 (68.04%), Query Frame = 1 Query: 1 NGSTFYCKGTINPDGDCDELRIQSNNETDWYEVRGHGGSLYFKDTVVTSWDTELKAPQEEYEG-GRSFLNCVSEKLATSGTGTNCTGEAKDEKGECRMDIINSEMGYMGWFDSESYGLTWKVRGFCKNLS------NHEVFTTTNVYGDINGSNIHHMYYGMYSYGHEGGVWTNNKMHHNHQYGFDPHDDSDYLTIAHNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDNALVHGNTITNMKDAGIALLESMNADIYDNVIDGAQYGIRMSLGSAGNFVHDNSFNACSDYGLFTYEGSDPPTEGVSDGRPFFNTFEANQVTNSAGS--VKIKYTDSMVISDNVFSGTPNIEIEFFDAQDTTWTNNEIPSTGVCVD 1137 +GST GT GD D LR+ S ++ D+ EVRG+GG+L+F+ T VTSWDT+ + E++G GRSF+NCV++ +C G + E GECRMDII+S MG MGWFD+ESYGLTWKVRG C+ NHE+F NVYGDI S I+ MYYG YSYGH+GGVW +N M N QYGFDPHDDSD LTI++N VY N NHGIIASKRCN+V+I++NEV DGG DAVGIFLHRSSD A VH N + NM+DAG+A++ES +A+IYDN +YGIR+SLGS N + +N F+ + YGL+TY GSD P S+GRP N F+ N + + V IK DS V DNVF+G E E D+ DTTW +N + G C+D Sbjct: 242 DGSTLLVHGTA-ASGDADVLRLLSTSD-DFIEVRGYGGNLHFQSTTVTSWDTD-NGQEREWDGDGRSFINCVTQ--FDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFE--DSSDTTWVDN---TGGGCLD 619
BLAST of mRNA_L-elsbetiae_contig6038.14576.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 383 bits (984), Expect = 5.150e-122 Identity = 204/376 (54.26%), Postives = 252/376 (67.02%), Query Frame = 1 Query: 43 GDCDELRIQSNNETDWYEVRGHGGSLYFKDTVVTSWDTELKAPQEEYEGGRSFLNCVSEKLATSGTGTNCTGEAKDEKGECRMDIINSEMGYMGWFDSESYGLTWKVRGFCKNLSNHEVFTTTNVYGDINGSNIHHMYYGMYSYGHEGGVWTNNKMHHNHQYGFDPHDDSDYLTIAHNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDNALVHGNTITNMKDAGIALLESMNADIYDNVIDGAQYGIRMSLGSAGNFVHDNSFNACSDYGLFTYEGSDPPTEGVS-DGRPFFNTFEANQVTNSAGSVKIKYTDSMVISDNVF-SGTPNIEIEFFDAQDTTWTNNEIPSTGVCVDNVLSDKGVD 1164 GD LRIQS D+YE+RGHGGSL F DT VTSWDT+ K Y+ RSF+ CVSE+LA C G A + GECRMDII SEMG MG+ +ESYG++WKVRG+C N EVF T V GDI S+I+ MYYG YS+GH+GG+WT NKMH N QYGFDPHDDSD L IA+N V+ N NHGIIASKRCN+V+I+ N V DGG AVGIFLHRSSD+ V GNT+ +MKDAG+A++ESM A I+DN +YGIR+S+G+A N V +NSF C YG++TY+G+D P DG NTF AN V G VKI+ + +V +DN F + E F D +D WTNN +P +C+ DK +D Sbjct: 467 GDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPD--TCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTVE---GGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPDD-ICL---KGDKNID 833
BLAST of mRNA_L-elsbetiae_contig6038.14576.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 360 bits (925), Expect = 2.860e-113 Identity = 196/379 (51.72%), Postives = 246/379 (64.91%), Query Frame = 1 Query: 1 NGSTFYCKGTINPDGDCDELRIQSNNETDWYEVRGHGGSLYFKDTVVTSWDTELKAPQEEYEGGRSFLNCVSEKLATSGTGTNCTGEAKDEKGECRMDIINSEMGYMGWFDSESYGLTWKVRGFCKNLSNHEVFTTTNVYGDINGSNIHHMYYGMYSYGHEGGVWTNNKMHHNHQYGFDPHDDSDYLTIAHNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDNALVHGNTITNMKDAGIALLESMNADIYDNVIDGAQYGIRMSLGSAGNFVHDNSFNACSDYGLFTYEGSDPPTEGVSDGRPFFNTFEANQVTNSAGSVKIKYTDSMVISDNVFSGTPNIEIEFFDAQDTTWTNNEIPSTGVCVD 1137 +G T Y GT + GD D LRIQS ++ D++E+RG GGSL F +T VTSWDT+ + EYEGGRSF+NCV++ +C+G + E+GECRMDII+S MG MGWFD+ESYGLTWKVRG C +LSN E+ NVYGDI GS I+ MYYGMYSYGH+GGVWT+N M N YGFDPHDDSD LTIA N VY N NHGIIASKRCN+V+IY AL+ES A+IYDN I+ +YGIR+SLGSA N +HDN+F++ S YGL+TY+GSD P +DGR N+F+AN ++N+ ++KIK D ++NVF E E D+ DT WTNN+I G C+D Sbjct: 464 DGVTLYVHGT-SAGGDADVLRIQSTDD-DFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQ--FDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIY--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFE--DSTDTVWTNNDIG--GGCLD 832
BLAST of mRNA_L-elsbetiae_contig6038.14576.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 340 bits (871), Expect = 5.080e-109 Identity = 186/371 (50.13%), Postives = 239/371 (64.42%), Query Frame = 1 Query: 1 NGSTFYCKGTINPDGDCDELRIQSNNETDWYEVRGHGGSLYFKDTVVTSWDTELKAPQEEYEGGRSFLNCVSEKLATSGTGTNCTGEAKDEKGECRMDIINSEMGYMGWFDSESYGLTWKVRGFCKNLSNHEVFTTTNVYGDINGSNIHHMYYGMYSYGHEGGVWTNNKMHHNHQYGFDPHDDSDYLTIAHNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDNALVHGNTITNMKDAGIALLESMNADIYDNVIDGAQYGIRMSLGSAGNFVHDNSFNACSDYGLFTYEGSDPPTEGVSDGRPFFNTFEANQVTNSAGSVKIKYTDSMVISDNVFS--GTPNIEIEFFDAQDTTWTNN 1107 +G T GT + GD DELR+ S +ET + +R HGGSL F T V SWDT +P E+ GRS+++ VSE + T T C G AK+ GE RMDI NSE+GY+G+ DSESYGLTWKVRGFCK+ SN E+F NVYG++ S+IHH+ +G+Y+YGH+ G W NKMH N YGFDPHDDSD+LTI N+VYNN HGIIASKRCN V I NEV G + GIFLHRSSD+A+V GN + + DAG+A+LES NAD+ +N + +YG+RMS+G A N +N + S Y +TY GSD P + VS GR N F N + + ++KIK D DNVF + + F DA ++ N Sbjct: 117 DGITLKVYGT-DEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSE-IVTDEDET-CEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEP-DVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGN 482 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6038.14576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6038.14576.1 >prot_L-elsbetiae_contig6038.14576.1 ID=prot_L-elsbetiae_contig6038.14576.1|Name=mRNA_L-elsbetiae_contig6038.14576.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=310bp MDIINSEMGYMGWFDSESYGLTWKVRGFCKNLSNHEVFTTTNVYGDINGSback to top mRNA from alignment at L-elsbetiae_contig6038:5638..7679- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6038.14576.1 ID=mRNA_L-elsbetiae_contig6038.14576.1|Name=mRNA_L-elsbetiae_contig6038.14576.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2042bp|location=Sequence derived from alignment at L-elsbetiae_contig6038:5638..7679- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6038:5638..7679- >mRNA_L-elsbetiae_contig6038.14576.1 ID=mRNA_L-elsbetiae_contig6038.14576.1|Name=mRNA_L-elsbetiae_contig6038.14576.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1860bp|location=Sequence derived from alignment at L-elsbetiae_contig6038:5638..7679- (Laminarionema elsbetiae ELsaHSoW15)back to top |