mRNA_L-elsbetiae_contig5989.14495.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5989.14495.1 vs. uniprot
Match: D8LS87_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI) HSP 1 Score: 144 bits (363), Expect = 5.820e-39 Identity = 75/106 (70.75%), Postives = 83/106 (78.30%), Query Frame = 1 Query: 1 TARRSGISLRYKEGLYFSSISGKANDYAVNSTKKGPRGRKWRCMFVCNVAAGKAFCTTEVGLPSDKCPPPGYDSVVGEVSPTGLNYDELVVYKEEAALPSYLIVYS 318 TARR+ LRY EGLYFSS+SGKANDYA S K GR+ RCMFV NVAAGKAF T E L ++CPP GYDSVVGEV GLNYDELVVYK+EAALP++LIVYS Sbjct: 349 TARRTNFGLRYGEGLYFSSVSGKANDYADFSEKTDSNGRRLRCMFVANVAAGKAFKTHETSLQQNECPPAGYDSVVGEVG-QGLNYDELVVYKDEAALPTHLIVYS 453
BLAST of mRNA_L-elsbetiae_contig5989.14495.1 vs. uniprot
Match: D8LKU8_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU8_ECTSI) HSP 1 Score: 131 bits (329), Expect = 6.390e-36 Identity = 67/106 (63.21%), Postives = 79/106 (74.53%), Query Frame = 1 Query: 1 TARRSGISLRYKEGLYFSSISGKANDYAVNSTKKGPRGRKWRCMFVCNVAAGKAFCTTEVGLPSDKCPPPGYDSVVGEVSPTGLNYDELVVYKEEAALPSYLIVYS 318 TARR+ RY EGLYFSS+SGK+NDYA S K G G+K RCMFV NV AG A+ T + L D CPP GYDSVVGEV +GL +DELV Y++EAA+PSYLIVY+ Sbjct: 127 TARRANYRRRYGEGLYFSSVSGKSNDYAQQSEKVGSDGKKVRCMFVANVTAGNAYLTQQGSLGQDMCPPAGYDSVVGEVG-SGLIHDELVAYEDEAAIPSYLIVYA 231
BLAST of mRNA_L-elsbetiae_contig5989.14495.1 vs. uniprot
Match: D8LS88_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS88_ECTSI) HSP 1 Score: 135 bits (340), Expect = 1.190e-35 Identity = 70/106 (66.04%), Postives = 80/106 (75.47%), Query Frame = 1 Query: 1 TARRSGISLRYKEGLYFSSISGKANDYAVNSTKKGPRGRKWRCMFVCNVAAGKAFCTTEVGLPSDKCPPPGYDSVVGEVSPTGLNYDELVVYKEEAALPSYLIVYS 318 TA +LRY +G+YFSS+SGKANDYA + K G K RCMFV NVAAGKA+ T E L KCPPPGY+SVVGEV GLNYDELVVYKEEAALP++LIVY+ Sbjct: 343 TALARNFNLRYGKGVYFSSVSGKANDYADLTAKTAKDGTKLRCMFVANVAAGKAYSTKEKALDDGKCPPPGYESVVGEVG-QGLNYDELVVYKEEAALPTHLIVYA 447
BLAST of mRNA_L-elsbetiae_contig5989.14495.1 vs. uniprot
Match: D7FXR1_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR1_ECTSI) HSP 1 Score: 129 bits (325), Expect = 2.430e-35 Identity = 65/106 (61.32%), Postives = 78/106 (73.58%), Query Frame = 1 Query: 1 TARRSGISLRYKEGLYFSSISGKANDYAVNSTKKGPRGRKWRCMFVCNVAAGKAFCTTEVGLPSDKCPPPGYDSVVGEVSPTGLNYDELVVYKEEAALPSYLIVYS 318 TAR +G LRY EG+Y +S+SGKANDYA S KK + RCMFV NVA G+ F T LP+++CPPPGY SVVGEV GLN+DE VVY EEAALP++LIVY+ Sbjct: 124 TARATGFPLRYGEGVYLTSVSGKANDYASRSAKKIGNDSELRCMFVANVAVGRTFKTKSTSLPANQCPPPGYQSVVGEVG-RGLNFDEFVVYDEEAALPTHLIVYA 228
BLAST of mRNA_L-elsbetiae_contig5989.14495.1 vs. uniprot
Match: A0A6H5JBF5_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF5_9PHAE) HSP 1 Score: 129 bits (325), Expect = 2.490e-35 Identity = 65/106 (61.32%), Postives = 80/106 (75.47%), Query Frame = 1 Query: 1 TARRSGISLRYKEGLYFSSISGKANDYAVNSTKKGPRGRKWRCMFVCNVAAGKAFCTTEVGLPSDKCPPPGYDSVVGEVSPTGLNYDELVVYKEEAALPSYLIVYS 318 TAR +G+ LRY EG+Y +S+SGKANDYA S KK + RCMFV +VA G+AF T LP+++CPPPGY SVVGEV GLN+DE VVY EEAALP++LIVY+ Sbjct: 125 TARATGVPLRYGEGIYLTSVSGKANDYASRSAKKIGIASELRCMFVASVAVGRAFKTKSTRLPANQCPPPGYQSVVGEVG-QGLNFDEFVVYNEEAALPTHLIVYA 229
BLAST of mRNA_L-elsbetiae_contig5989.14495.1 vs. uniprot
Match: D8LS86_ECTSI (PARP catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI) HSP 1 Score: 132 bits (332), Expect = 2.440e-34 Identity = 67/106 (63.21%), Postives = 81/106 (76.42%), Query Frame = 1 Query: 1 TARRSGISLRYKEGLYFSSISGKANDYAVNSTKKGPRGRKWRCMFVCNVAAGKAFCTTEVGLPSDKCPPPGYDSVVGEVSPTGLNYDELVVYKEEAALPSYLIVYS 318 TARR+ LRY +GLYFSS+SGKANDYA S K G+K RCMF+ +V G+AF T E LP ++CPPPG+DSVVGE P LNY E+VVYKEEAALP++LIVY+ Sbjct: 369 TARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLSSVTVGRAFITYEGKLPPEQCPPPGFDSVVGEKGPA-LNYPEVVVYKEEAALPTHLIVYA 473
BLAST of mRNA_L-elsbetiae_contig5989.14495.1 vs. uniprot
Match: D8LKU5_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU5_ECTSI) HSP 1 Score: 132 bits (333), Expect = 7.710e-34 Identity = 70/106 (66.04%), Postives = 79/106 (74.53%), Query Frame = 1 Query: 1 TARRSGISLRYKEGLYFSSISGKANDYAVNSTKKGPRGRKWRCMFVCNVAAGKAFCTTEVGLPSDKCPPPGYDSVVGEVSPTGLNYDELVVYKEEAALPSYLIVYS 318 TAR SGI LRY G+YFSS+SGKANDYA S K G G + RCMFV NVA GKAF T + LP +CPP G SVVGEV LNYDE+VVYKEEAALP++LIVY+ Sbjct: 571 TARASGIPLRYGTGIYFSSVSGKANDYARLSAKTGSDGAELRCMFVANVAGGKAFSTKKSHLPQSECPPSGCQSVVGEVG-HALNYDEVVVYKEEAALPTHLIVYA 675
BLAST of mRNA_L-elsbetiae_contig5989.14495.1 vs. uniprot
Match: A0A813I6I7_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813I6I7_POLGL) HSP 1 Score: 124 bits (311), Expect = 1.830e-31 Identity = 66/107 (61.68%), Postives = 79/107 (73.83%), Query Frame = 1 Query: 10 RSGISLRYKEGLYFSSISGKANDYAVNST--KKGPRG--RKWRCMFVCNVAAGKAFCTTEVGLPSDKCPPPGYDSVVGEVSPTGLNYDELVVYKEEAALPSYLIVYS 318 R+ +LRY GLYFS+ SGK+NDYA S K RG R+WRCMFVC+VA GKA TTE LP +CPPPGYD+VVGEV LN+DE+VVY E AA+PS+L+VYS Sbjct: 340 RNTSALRYGPGLYFSATSGKSNDYAEGSERMKHEARGAQRRWRCMFVCHVAIGKAHLTTEGWLPQQQCPPPGYDAVVGEVG-ENLNFDEVVVYDEAAAVPSFLVVYS 445
BLAST of mRNA_L-elsbetiae_contig5989.14495.1 vs. uniprot
Match: D8LKU9_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU9_ECTSI) HSP 1 Score: 122 bits (305), Expect = 3.060e-30 Identity = 64/106 (60.38%), Postives = 73/106 (68.87%), Query Frame = 1 Query: 1 TARRSGISLRYKEGLYFSSISGKANDYAVNSTKKGPRGRKWRCMFVCNVAAGKAFCTTEVGLPSDKCPPPGYDSVVGEVSPTGLNYDELVVYKEEAALPSYLIVYS 318 TAR + LRY G+Y SS+SGKANDYA S K G G + RCMFV NVA GKAF T LP CPP GY SVVGEV LN+DE+VVYKE A LP++LIVY+ Sbjct: 432 TARATRFPLRYGPGVYLSSVSGKANDYAGRSAKTGSDGTELRCMFVANVAVGKAFNTKSSNLPQSACPPLGYQSVVGEVG-QALNFDEVVVYKEAAVLPTHLIVYA 536
BLAST of mRNA_L-elsbetiae_contig5989.14495.1 vs. uniprot
Match: D7FXR2_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR2_ECTSI) HSP 1 Score: 118 bits (295), Expect = 2.890e-29 Identity = 63/106 (59.43%), Postives = 75/106 (70.75%), Query Frame = 1 Query: 1 TARRSGISLRYKEGLYFSSISGKANDYAVNSTKKGPRGRKWRCMFVCNVAAGKAFCTTEVGLPSDKCPPPGYDSVVGEVSPTGLNYDELVVYKEEAALPSYLIVYS 318 TAR + LRY G+Y +S+SGKANDYA S KK + RCMFV +VA G F TT LP+D+CPPPGY SVVGE LN+DE VVYKEEAALP++LIVY+ Sbjct: 322 TARATRFPLRYGAGIYLTSVSGKANDYASRSAKKVGE-LELRCMFVASVALGNTFKTTSARLPADQCPPPGYHSVVGEAGQR-LNFDEFVVYKEEAALPTHLIVYA 425 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5989.14495.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5989.14495.1 >prot_L-elsbetiae_contig5989.14495.1 ID=prot_L-elsbetiae_contig5989.14495.1|Name=mRNA_L-elsbetiae_contig5989.14495.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=110bp TARRSGISLRYKEGLYFSSISGKANDYAVNSTKKGPRGRKWRCMFVCNVAback to top mRNA from alignment at L-elsbetiae_contig5989:5969..6760+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5989.14495.1 ID=mRNA_L-elsbetiae_contig5989.14495.1|Name=mRNA_L-elsbetiae_contig5989.14495.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=792bp|location=Sequence derived from alignment at L-elsbetiae_contig5989:5969..6760+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5989:5969..6760+ >mRNA_L-elsbetiae_contig5989.14495.1 ID=mRNA_L-elsbetiae_contig5989.14495.1|Name=mRNA_L-elsbetiae_contig5989.14495.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=660bp|location=Sequence derived from alignment at L-elsbetiae_contig5989:5969..6760+ (Laminarionema elsbetiae ELsaHSoW15)back to top |