mRNA_L-elsbetiae_contig5947.14436.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5947.14436.1
Unique NamemRNA_L-elsbetiae_contig5947.14436.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: D7FRC4_ECTSI (PNPLA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC4_ECTSI)

HSP 1 Score: 508 bits (1309), Expect = 2.290e-173
Identity = 289/438 (65.98%), Postives = 311/438 (71.00%), Query Frame = 1
Query:    1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESMLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLVMPHNFRGKRCFDGFFAEGASAPTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGIEHSCSHVSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHRGEEGXXXXXXXXXXXXXXXXKPA------HYVRSSFALSLCHMRPHRERHPHLDAPRFVPSLEKFVGHGSYHAAADFVFVVFFNVVWRPAAALILLADLVARLLVASSRGLAKDLRPLLWWLTPTLLLCGAALERGPSGPEGLAAAAAVAAAVFLG---RGDAGREEWQKAGRCVRALVDFRLVLVRALV-PWAEG 1284
            IV+QAKTSFIPRAHAARFFGFVYG+FYIG+FL ES+LACLPVE+V  NTSPPGRL VV++SVLGWKS RAKEF DG DLIDALRCSCACFPLV+PH FRGKRCFDG F+EG SAP+LDE EA G  TVTISPLYASTASIRPSRYVPLSWIALPPND  AIDWLYDLGYRDALFWMA EGIEH+CSHVSRL                              XXXXXXXXXXX         RG EG                +         YVR SF LS C MRP RERH  LDAPRFVPSLEKFVGHGSYHA AD +F VFFNVVWRPAAAL+L A+LV  LL+ASSR  AKDLRPLLWWL PTLLL  AALE  P+  EG+AAA AVAA         G  G+E W++A R  RALVDFR VL   L+ PW  G
Sbjct:   53 IVEQAKTSFIPRAHAARFFGFVYGMFYIGQFLLESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDGDDLIDALRCSCACFPLVLPHVFRGKRCFDGVFSEGPSAPSLDEEEAGGRKTVTISPLYASTASIRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMANEGIEHTCSHVSRLSKFSSSSNGCAPDSTMAKDSVLEGGASALRXXXXXXXXXXX--------RRGNEGGVGLKSTTAREDGEGRRNGGGQEGQFYVRPSFTLSGCRMRPRRERHAELDAPRFVPSLEKFVGHGSYHALADSLFCVFFNVVWRPAAALLLCAELVTSLLLASSRAFAKDLRPLLWWLLPTLLLGEAALEHWPTAMEGIAAAVAVAAXXXXAASREGAPGKESWREARRSARALVDFRCVLGSTLLLPWGRG 482          
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: A0A6H5KQY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY3_9PHAE)

HSP 1 Score: 475 bits (1223), Expect = 1.020e-159
Identity = 294/517 (56.87%), Postives = 317/517 (61.32%), Query Frame = 1
Query:    1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESMLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLVMPHNFRGKRCFDGFFAEGASAPTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGIEHSCSHVSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ--------------------------------------------------------------------------------HRGEEGXXXXXXXXXXXXXXXXKPA-----HYVRSSFALSLCHMRPHRERHPHLDAPRFVPSLEKFVGHGSYHAAADFVFVVFFNVVWRPAAALILLADLVARLLVASSRGLAKDLRPLLWWLTPTLLLCGAALERGPSGPEGLAAAAAVAAAVFLG---RGDAGREEWQKAGRCVRALVDFRLVLVRALV-PWAEG 1284
            IV+QAKTSFIPRAHAARFFGFVYG+FYIG+FL ES+LACLPVE+V  NTSPPGRL VV++SVLGWKS RAKEF DG DLIDALRCSCACFPLV+PH FRGKRCFDG F+EG SAP+ DE EA GL TVTISPLYASTASIRPSRYVPLSWIALPPND  AIDWLYDLGYRDALFWMA EGI+H+CSHVSRL                             XXXXXXXXXXXXXXXXXXX                                                                                  RG EG                         YVR SF LS C MRP RERH  LDAPRFVPSLEKFVGHGSYHA AD +F VFFNVVWRPAAAL+L A+LV  LL+ASSR  AKDLRPLLWWL PTLLL GAALE  P   +G+AAA AV           G  G+E W++A +  RALVDFR VLV  L+ PW  G
Sbjct:   11 IVEQAKTSFIPRAHAARFFGFVYGMFYIGQFLLESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDGEDLIDALRCSCACFPLVLPHVFRGKRCFDGVFSEGPSAPSFDEEEARGLKTVTISPLYASTASIRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMANEGIDHTCSHVSRLSRFSSSSTGCAPDSTMAKDSVLEGGASALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAARRGNEGVGLKSTTAREDGQGRRNGVGQERQFYVRPSFTLSGCRMRPRRERHAELDAPRFVPSLEKFVGHGSYHALADSLFCVFFNVVWRPAAALLLCAELVTSLLLASSRAFAKDLRPLLWWLLPTLLLGGAALEHRPIATQGIAAAVAVXXXXXXXASREGAPGKESWREARQSARALVDFRCVLVNTLLLPWGRG 527          
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: A0A835ZCR0_9STRA (Acyl transferase/acyl hydrolase/lysophospholipase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCR0_9STRA)

HSP 1 Score: 120 bits (300), Expect = 3.130e-26
Identity = 68/189 (35.98%), Postives = 95/189 (50.26%), Query Frame = 1
Query:    1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESMLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLVMPHNFRGKRCFDGFFAEGASA--PTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGIEHSCSH 561
            ++   K++ +P+      +G   G F I ++ ++ M  C+ +    +   P G L  V+  + G ++ R   F D A L DA+  S A  P+       G+ C DG  +E      PTL E       TV ++P Y S A IRPSRYVP+ W  LPP D  +IDWLYDLGY DAL WM    + H C H
Sbjct:   74 VIAYVKSTVLPQV-----WGSPAGPFRITRYCRDCMARCVNLGAAAEL--PHGELTAVVTQLSGLRALRVSAFRDAAHLADAVLASAAAIPIASAIRLDGRWCVDGGLSEFHPRLDPTLGE-------TVYVNPFYFSHADIRPSRYVPVWWAFLPPRDPNSIDWLYDLGYSDALDWMRRRRLAHCCKH 248          
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: A0A7S3URP2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URP2_HETAK)

HSP 1 Score: 108 bits (270), Expect = 6.170e-22
Identity = 65/190 (34.21%), Postives = 94/190 (49.47%), Query Frame = 1
Query:    1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESMLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLVMPHNFRGKRCFDGFFAEGASA---PTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGIEHSCSH 561
            ++D  K++ IP          + G F I  ++   + A   + K        GRL V   S+  ++S R   F    D+   L  SCA FPL    +   +R   G + +G  +   P L +       T+T++PL+   A I+PSRYVP  W ALPP D   IDWL+DLGY+D L WMA+ G  H+C+H
Sbjct:   96 VMDFCKSTLIPECRNN-----LAGPFKINSYVDRCLDAATDLSKYEQAN---GRLFVQTTSLPRFQSVRVSRFESALDMKTTLLASCAAFPL----SPLVRRLDGGLYVDGGLSDFQPILSKR------TITVNPLWFWKADIKPSRYVPAIWAALPPKDPSTIDWLFDLGYKDCLSWMAKNGYAHTCTH 267          
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: A0A835Z0V0_9STRA (PNPLA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0V0_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.340e-18
Identity = 62/186 (33.33%), Postives = 89/186 (47.85%), Query Frame = 1
Query:    4 VDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESMLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLVMPHNFRGKRCFDGFFAEGASAPTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGIEHSCSH 561
            V+  K   IP+  A   +G   G F +  ++++  +  + ++           +M  +  VL  +S R   F      +D L  S A  PL    N  G  C DG  ++    P + +G  A   T+ +SP Y   A I+PSRYVP+ W  LPP  +  IDWLYDLGYRDAL WM   G++  C H
Sbjct:  611 VNYCKEVLIPKCWAT--WG---GPFSLTSYVRDCAIRTMDLDLATQLRGEVTAVMTRVTPVL--RSERVSFFESREHCVDVLLASTAAVPLASAINVDGGWCIDGGLSDFQPRP-VPKGNVAE--TIFVSPFYLVDADIKPSRYVPVWWAFLPPPHSGTIDWLYDLGYRDALLWMQRRGLDFCCDH 786          
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: A0A662WWA0_9STRA (PNPLA domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WWA0_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.530e-17
Identity = 61/187 (32.62%), Postives = 89/187 (47.59%), Query Frame = 1
Query:    1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKF-LKESMLACLPVEKVPDNTSP-PGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLV-MPHNFRGKRCFDGFFAEGASAPTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGIEHS 552
            I D    S++P AH +          + G F +++ ++  +      DN     G++ VV  S+  W S R   F +   ++  +  SC   PLV +P    G+   DG   +  + P  +     G+PT+T+SP   S A IRPSRYVP  W   PP+  + + WLYDLGY DAL W   EG   S
Sbjct:  180 ICDSVINSYVPAAHGS----------WKGPFNMRDYLVDAITRHANTDNIHKLEGKVTVVYTSLSAWASRRVSHFKNPVHMLHTMVASCCATPLVGLPFEHEGEYVIDGGLLD--NQPLFE-----GIPTITVSPNVFSGADIRPSRYVPAWWSMYPPSQ-RDMQWLYDLGYEDALSWCIREGFPGS 348          
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: H3GIV2_PHYRM (PNPLA domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIV2_PHYRM)

HSP 1 Score: 95.9 bits (237), Expect = 2.340e-17
Identity = 62/187 (33.16%), Postives = 87/187 (46.52%), Query Frame = 1
Query:    1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESML--ACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLV-MPHNFRGKRCFDGFFAEGASAPTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGIEHS 552
            I D     ++P AHA+          + G F     L  A     KV +     G++ VV  S+  W + R   F     L+  +  SC   PLV MP    G+   DG   +  + P  ++    G+ T+T++P   +TA IRPSRYVP  W   PP+  + + WLYDLGY DAL W   EG+  S
Sbjct:  152 ICDSVINDYVPAAHAS----------WKGPFKMRDYLIDAITRHGKVDNMDKLHGKVTVVYTSLSSWVTRRVSHFKSPVHLLHTMVASCCATPLVGMPFEHEGEYVIDGGLLD--NQPLFED----GVRTITVTPNVFATADIRPSRYVPPWWSMYPPSQ-RDMQWLYDLGYEDALSWCVREGLPRS 321          
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: A0A1V9YNE4_9STRA (Patatin-like phospholipase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNE4_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.410e-16
Identity = 56/182 (30.77%), Postives = 91/182 (50.00%), Query Frame = 1
Query:    1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESMLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLV-MPHNFRGKRCFDGFFAEGASAPTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGI 543
            +V      F+P A A+     + G   +  +L+E++      E++ +  +   R +VV +S+  W+S R   F +     DA+  SC   P+   P    G+  FDG   +    P +D        T+T+SP Y +TA I+PS+YVP+ W   PP   ++I WLY+LG RDA+ W   +G+
Sbjct:   60 MVGGVVQDFVPLARAS-----LGGACNVRSYLREAIARYGNFERITELNATE-RCVVVYSSISKWRSRRVTRFRNATHATDAVLASCCATPIAGFPFRIDGEWVFDGGIFD--FQPVVDAS------TITVSPFYCTTADIKPSQYVPMWWAVYPPAP-ESIQWLYELGQRDAIAWAKAKGL 226          
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: A0A3F2RQZ1_9STRA (PNPLA domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQZ1_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 7.990e-16
Identity = 62/191 (32.46%), Postives = 89/191 (46.60%), Query Frame = 1
Query:    1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESMLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLV-MPHNFRGKRCFDGFFAEGASAPTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGIEHSCSHVSR 570
            I D     ++P AHA        G F + ++L +++     V  +        ++ VV  S+ GW S R   F +   L+  +  SC   PLV +P    G+   DG   +  + P  D     G+ T+T+SP   S A IRPSRYVP  W   PP+  + + WLYDLGY DAL          SC+ V+R
Sbjct:   73 ICDSVINDYVPAAHATW-----KGPFNMREYLVDAITHHADVNNMDKLND---KVTVVYTSLSGWVSRRVSNFKNPIHLLYTMVASCCATPLVGLPFKHEGEYVIDGGLLD--NQPLFD-----GISTITVSPNVFSDADIRPSRYVPAWWSMYPPSQ-RDMQWLYDLGYEDAL----------SCNEVTR 237          
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: A0A421GFZ9_9STRA (PNPLA domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GFZ9_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 5.890e-15
Identity = 58/174 (33.33%), Postives = 83/174 (47.70%), Query Frame = 1
Query:    1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESMLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLV-MPHNFRGKRCFDGFFAEGASAPTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDAL 519
            I D     ++P AHA        G F + ++L +++     V  +        ++ VV  S+ GW S R   F +   L+  +  SC   PLV +P    G+   DG   +  + P  D     G+ T+T+SP   S A IRPSRYVP  W   PP+  + + WLYDLGY DAL
Sbjct:  164 ICDSVINDYVPAAHATW-----KGPFNMREYLVDAITHHADVNNMDKLND---KVTVVYTSLSGWVSRRVSNFKNPIHLLYTMVASCCATPLVGLPFKHEGEYVIDGGLLD--NQPLFD-----GISTITVSPSVFSDADIRPSRYVPAWWSMYPPSQ-RDMQWLYDLGYEDAL 321          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FRC4_ECTSI2.290e-17365.98PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KQY3_9PHAE1.020e-15956.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZCR0_9STRA3.130e-2635.98Acyl transferase/acyl hydrolase/lysophospholipase ... [more]
A0A7S3URP2_HETAK6.170e-2234.21Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835Z0V0_9STRA3.340e-1833.33PNPLA domain-containing protein n=1 Tax=Tribonema ... [more]
A0A662WWA0_9STRA1.530e-1732.62PNPLA domain-containing protein n=2 Tax=Nothophyto... [more]
H3GIV2_PHYRM2.340e-1733.16PNPLA domain-containing protein n=1 Tax=Phytophtho... [more]
A0A1V9YNE4_9STRA2.410e-1630.77Patatin-like phospholipase n=1 Tax=Achlya hypogyna... [more]
A0A3F2RQZ1_9STRA7.990e-1632.46PNPLA domain-containing protein n=1 Tax=Phytophtho... [more]
A0A421GFZ9_9STRA5.890e-1533.33PNPLA domain-containing protein n=2 Tax=Phytophtho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5947contigL-elsbetiae_contig5947:3995..6224 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score446.8
Seed ortholog evalue1.3e-122
Seed eggNOG ortholog2880.D7FRC4
KEGG rclassRC00020,RC00037,RC00041,RC00094
KEGG koko:K16816
KEGG ReactionR02250,R02687
KEGG Pathwayko00561,ko01100,ko04714,ko04923,map00561,map01100,map04714,map04923
KEGG ModuleM00098
Hectar predicted targeting categoryother localisation
EggNOG free text desc.triglyceride catabolic process
EggNOG OGsKOG3773@1,KOG3773@2759
Ec32 ortholog descriptionAcyl transferase/acyl hydrolase/lysophospholipase
Ec32 orthologEc-26_002630.1
EC3.1.1.3
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons3
Model size1631
Cds size1473
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5947.14436.1prot_L-elsbetiae_contig5947.14436.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5947 4100..6171 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816643.9260058-UTR-L-elsbetiae_contig5947:3994..40991622816643.9260058-UTR-L-elsbetiae_contig5947:3994..4099Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5947 3995..4099 +
1691683707.5537822-UTR-L-elsbetiae_contig5947:3994..40991691683707.5537822-UTR-L-elsbetiae_contig5947:3994..4099Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5947 3995..4099 +
1622816643.9734871-UTR-L-elsbetiae_contig5947:6171..62241622816643.9734871-UTR-L-elsbetiae_contig5947:6171..6224Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5947 6172..6224 +
1691683707.5999577-UTR-L-elsbetiae_contig5947:6171..62241691683707.5999577-UTR-L-elsbetiae_contig5947:6171..6224Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5947 6172..6224 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816643.9387887-CDS-L-elsbetiae_contig5947:4099..43631622816643.9387887-CDS-L-elsbetiae_contig5947:4099..4363Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5947 4100..4363 +
1691683707.569084-CDS-L-elsbetiae_contig5947:4099..43631691683707.569084-CDS-L-elsbetiae_contig5947:4099..4363Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5947 4100..4363 +
1622816643.94975-CDS-L-elsbetiae_contig5947:4767..51131622816643.94975-CDS-L-elsbetiae_contig5947:4767..5113Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5947 4768..5113 +
1691683707.5787113-CDS-L-elsbetiae_contig5947:4767..51131691683707.5787113-CDS-L-elsbetiae_contig5947:4767..5113Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5947 4768..5113 +
1622816643.9617193-CDS-L-elsbetiae_contig5947:5308..61711622816643.9617193-CDS-L-elsbetiae_contig5947:5308..6171Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5947 5309..6171 +
1691683707.5875823-CDS-L-elsbetiae_contig5947:5308..61711691683707.5875823-CDS-L-elsbetiae_contig5947:5308..6171Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5947 5309..6171 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5947.14436.1

>prot_L-elsbetiae_contig5947.14436.1 ID=prot_L-elsbetiae_contig5947.14436.1|Name=mRNA_L-elsbetiae_contig5947.14436.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=491bp
MLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRC
SCACFPLVMPHNFRGKRCFDGFFAEGASAPTLDEGEAAGLPTVTISPLYA
STASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGIEHSC
SHVSRLSRFSQKRSTAAAATTATTAAATTATAAAAAALRAGAGDSSDSSC
SSRGQHRGEEGGGGRGAGGKGGGGRGGKPAHYVRSSFALSLCHMRPHRER
HPHLDAPRFVPSLEKFVGHGSYHAAADFVFVVFFNVVWRPAAALILLADL
VARLLVASSRGLAKDLRPLLWWLTPTLLLCGAALERGPSGPEGLAAAAAV
AAAVFLGRGDAGREEWQKAGRCVRALVDFRLVLVRALVPWAEGRWDRGGG
GGGRGGGGAGGDRGGGGGGGGGPGGGLMDGGGFFFMWFWGGEGRVXXXLG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGA*
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mRNA from alignment at L-elsbetiae_contig5947:3995..6224+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5947.14436.1 ID=mRNA_L-elsbetiae_contig5947.14436.1|Name=mRNA_L-elsbetiae_contig5947.14436.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2230bp|location=Sequence derived from alignment at L-elsbetiae_contig5947:3995..6224+ (Laminarionema elsbetiae ELsaHSoW15)
ATCGTGGACCAGGCGAAGACCAGCTTCATACCAAGGGCACACGCCGCGAG GTTCTTCGGGTTCGTGTACGGCATTTTCTACATAGGAAAATTTCTCAAGG AATCCATGCTGGCGTGCCTCCCCGTGGAAAAGGTCCCCGACAACACGTCC CCTCCCGGGAGGCTGATGGTGGTCATGGCGTCCGTTCTCGGCTGGAAGTC TTTCCGCGCCAAGGAGTTCAGCGACGGCGCCGACCTCATCGACGCCCTGC GGTGCTCGTGCGCGTGCTTCCCCTTGGTGATGCCGCACAACTTCCGCGGC AAGCGCTGCTTCGACGGCTTCTTCGCGGAGGGCGCGAGCGCCCCGACTCT GGACGAGGGCGAGGCTGCGGTAAGATTTGTTCGCTCCCGGATGGAAACCT CGATGAAGAGGTTACTGCTGTGCCGCTCAAAGGACTAGTGGTATCGCCGA GAAGGTGCTTGGCGCAGAGACACCGTCGACCATAACTTCTATCTGCTCGG AGTCCCACCTCTGCCCGTCTTCTCGCCTGAACGAAACGTGTCGTTTTCCG ACCCATCTGACCATCTGCATGAAGCCTGTTGCTTCCGACCAGGGGCCACC CACGCACGAGTTACGAGCCCTGCACGGCCTCACGTATGTACCATAAAAAA CTTCTCTCCGCGTGCAGGCAGCACCTGCTCAGCCTCTCAAATCTCTACAA AAAAACGCAAGCAAAATCCCCCCCCCCTAACCTCGCGTTTCCAATCGCCG CATATCTCACACTTCGCGCGCAGGGGCTCCCGACCGTGACCATCAGCCCT CTGTACGCCAGCACCGCGTCGATCCGGCCGTCGAGGTACGTGCCTCTCTC GTGGATCGCGCTTCCACCGAACGACACCAAAGCAATCGACTGGCTGTACG ACCTGGGGTACCGCGACGCCCTGTTCTGGATGGCGGAGGAAGGGATCGAG CACAGCTGCTCACACGTCTCAAGGCTTTCGAGGTTCTCCCAGAAACGAAG CACCGCCGCCGCCGCCACCACCGCCACCACCGCTGCCGCCACCACCGCCA CCGCCGCTGCCGCAGCCGCCCTCAGGGCCGGAGCCGGCGACAGCAGCGAC AGCAGCTGCAGCAGCAGGGGTAGTGACAACGACGACGACGACAACGACAG CGGCCACGACTGCCGGAAACCGAAGAGGGCTGTGGGGGTGCCTGCCACCC CAACAGGACCGACCGAACCCTGCGGCACAAGCAACGACGGCGAGCAGGGC GAGGAGGAGAAACCACCGTCGGCATCACCGACGTCGCCGTCGCCGGCGGT TGCCGGTAAACGAGGGCAACACCGAGGGGAAGAAGGGGGGGGGGGAAGAG GCGCTGGGGGAAAGGGAGGGGGGGGGCGGGGAGGGAAACCGGCGCACTAC GTCCGCTCATCCTTCGCGCTCAGCCTATGCCACATGCGGCCGCACCGGGA GCGGCACCCGCACCTCGACGCCCCGAGGTTCGTCCCCTCCCTCGAGAAGT TCGTGGGCCACGGCTCGTACCATGCCGCGGCCGACTTCGTGTTCGTCGTG TTTTTCAACGTCGTCTGGCGCCCGGCCGCCGCGCTGATCCTCCTCGCCGA CCTCGTGGCCAGGCTCCTGGTCGCCTCGTCGAGGGGGCTCGCGAAGGATC TCCGCCCCCTCCTGTGGTGGCTCACCCCGACCCTTCTCCTCTGCGGGGCC GCCCTGGAGCGCGGCCCGTCGGGGCCGGAGGGGCTTGCGGCGGCCGCGGC GGTGGCGGCGGCGGTGTTCCTCGGGAGGGGCGACGCCGGGCGGGAGGAGT GGCAGAAGGCGGGGCGGTGCGTCCGCGCGCTCGTCGACTTCCGCCTCGTG CTGGTGAGAGCGCTGGTGCCCTGGGCAGAAGGGCGGTGGGACAGAGGAGG CGGCGGAGGGGGACGGGGAGGGGGGGGGGCAGGTGGAGACAGGGGGGGGG GGGGGGGGGGGGGGGGGGGGCCCGGGGGGGGCTTGATGGACGGGGGGGGG TTCTTTTTCATGTGGTTTTGGGGGGGGGAAGGCCGAGTCGGNNNNNGGCT CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGCGTGAGGTCGGAGGCGCTCGAGAGGAGC TTCATGTACCGGGCGGTGTCATTTTTCATG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5947:3995..6224+

>mRNA_L-elsbetiae_contig5947.14436.1 ID=mRNA_L-elsbetiae_contig5947.14436.1|Name=mRNA_L-elsbetiae_contig5947.14436.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2946bp|location=Sequence derived from alignment at L-elsbetiae_contig5947:3995..6224+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGGCGTGCCTCCCCGTGGAAAAGGTCCCCGACAACACGTCCCCTCC
CGGGAGGCTGATGGTGGTCATGGCGTCCGTTCTCGGCTGGAAGTCTTTCC
GCGCCAAGGAGTTCAGCGACGGCGCCGACCTCATCGACGCCCTGCGGTGC
TCGTGCGCGTGCTTCCCCTTGGTGATGCCGCACAACTTCCGCGGCAAGCG
CTGCTTCGACGGCTTCTTCGCGGAGGGCGCGAGCGCCCCGACTCTGGACG
AGGGCGAGGCTGCGATGCTGGCGTGCCTCCCCGTGGAAAAGGTCCCCGAC
AACACGTCCCCTCCCGGGAGGCTGATGGTGGTCATGGCGTCCGTTCTCGG
CTGGAAGTCTTTCCGCGCCAAGGAGTTCAGCGACGGCGCCGACCTCATCG
ACGCCCTGCGGTGCTCGTGCGCGTGCTTCCCCTTGGTGATGCCGCACAAC
TTCCGCGGCAAGCGCTGCTTCGACGGCTTCTTCGCGGAGGGCGCGAGCGC
CCCGACTCTGGACGAGGGCGAGGCTGCGGGGCTCCCGACCGTGACCATCA
GCCCTCTGTACGCCAGCACCGCGTCGATCCGGCCGTCGAGGTACGTGCCT
CTCTCGTGGATCGCGCTTCCACCGAACGACACCAAAGCAATCGACTGGCT
GTACGACCTGGGGTACCGCGACGCCCTGTTCTGGATGGCGGAGGAAGGGA
TCGAGCACAGCTGCTCACACGTCTCAAGGCTTTCGAGGTTCTCCCAGAAA
CGAAGCACCGCCGCCGCCGCCACCACCGCCACCACCGCTGCCGCCACCAC
CGCCACCGCCGCTGCCGCAGCCGCCCTCAGGGCCGGAGCCGGCGACAGCA
GCGACAGCAGCTGCAGCAGCAGGGGGGCTCCCGACCGTGACCATCAGCCC
TCTGTACGCCAGCACCGCGTCGATCCGGCCGTCGAGGTACGTGCCTCTCT
CGTGGATCGCGCTTCCACCGAACGACACCAAAGCAATCGACTGGCTGTAC
GACCTGGGGTACCGCGACGCCCTGTTCTGGATGGCGGAGGAAGGGATCGA
GCACAGCTGCTCACACGTCTCAAGGCTTTCGAGGTTCTCCCAGAAACGAA
GCACCGCCGCCGCCGCCACCACCGCCACCACCGCTGCCGCCACCACCGCC
ACCGCCGCTGCCGCAGCCGCCCTCAGGGCCGGAGCCGGCGACAGCAGCGA
CAGCAGCTGCAGCAGCAGGGGGCAACACCGAGGGGAAGAAGGGGGGGGGG
GAAGAGGCGCTGGGGGAAAGGGAGGGGGGGGGCGGGGAGGGAAACCGGCG
CACTACGTCCGCTCATCCTTCGCGCTCAGCCTATGCCACATGCGGCCGCA
CCGGGAGCGGCACCCGCACCTCGACGCCCCGAGGTTCGTCCCCTCCCTCG
AGAAGTTCGTGGGCCACGGCTCGTACCATGCCGCGGCCGACTTCGTGTTC
GTCGTGTTTTTCAACGTCGTCTGGCGCCCGGCCGCCGCGCTGATCCTCCT
CGCCGACCTCGTGGCCAGGCTCCTGGTCGCCTCGTCGAGGGGGCTCGCGA
AGGATCTCCGCCCCCTCCTGTGGTGGCTCACCCCGACCCTTCTCCTCTGC
GGGGCCGCCCTGGAGCGCGGCCCGTCGGGGCCGGAGGGGCTTGCGGCGGC
CGCGGCGGTGGCGGCGGCGGTGTTCCTCGGGAGGGGCGACGCCGGGCGGG
AGGAGTGGCAGAAGGCGGGGCGGTGCGTCCGCGCGCTCGTCGACTTCCGC
CTCGTGCTGGTGAGAGCGCTGGTGCCCTGGGCAGAAGGGCGGTGGGACAG
AGGAGGCGGCGGAGGGGGACGGGGAGGGGGGGGGGCAGGTGGAGACAGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGCCCGGGGGGGGCTTGATGGACGGG
GGGGGGTTCTTTTTCATGTGGTTTTGGGGGGGGGAAGGCCGAGTCGGNNN
NNGGCTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGCGTGAGGCAACACCGAGGGGAA
GAAGGGGGGGGGGGAAGAGGCGCTGGGGGAAAGGGAGGGGGGGGGCGGGG
AGGGAAACCGGCGCACTACGTCCGCTCATCCTTCGCGCTCAGCCTATGCC
ACATGCGGCCGCACCGGGAGCGGCACCCGCACCTCGACGCCCCGAGGTTC
GTCCCCTCCCTCGAGAAGTTCGTGGGCCACGGCTCGTACCATGCCGCGGC
CGACTTCGTGTTCGTCGTGTTTTTCAACGTCGTCTGGCGCCCGGCCGCCG
CGCTGATCCTCCTCGCCGACCTCGTGGCCAGGCTCCTGGTCGCCTCGTCG
AGGGGGCTCGCGAAGGATCTCCGCCCCCTCCTGTGGTGGCTCACCCCGAC
CCTTCTCCTCTGCGGGGCCGCCCTGGAGCGCGGCCCGTCGGGGCCGGAGG
GGCTTGCGGCGGCCGCGGCGGTGGCGGCGGCGGTGTTCCTCGGGAGGGGC
GACGCCGGGCGGGAGGAGTGGCAGAAGGCGGGGCGGTGCGTCCGCGCGCT
CGTCGACTTCCGCCTCGTGCTGGTGAGAGCGCTGGTGCCCTGGGCAGAAG
GGCGGTGGGACAGAGGAGGCGGCGGAGGGGGACGGGGAGGGGGGGGGGCA
GGTGGAGACAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCCCGGGGGGGG
CTTGATGGACGGGGGGGGGTTCTTTTTCATGTGGTTTTGGGGGGGGGAAG
GCCGAGTCGGNNNNNGGCTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGTGA
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