mRNA_L-elsbetiae_contig5947.14436.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: D7FRC4_ECTSI (PNPLA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC4_ECTSI) HSP 1 Score: 508 bits (1309), Expect = 2.290e-173 Identity = 289/438 (65.98%), Postives = 311/438 (71.00%), Query Frame = 1 Query: 1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESMLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLVMPHNFRGKRCFDGFFAEGASAPTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGIEHSCSHVSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHRGEEGXXXXXXXXXXXXXXXXKPA------HYVRSSFALSLCHMRPHRERHPHLDAPRFVPSLEKFVGHGSYHAAADFVFVVFFNVVWRPAAALILLADLVARLLVASSRGLAKDLRPLLWWLTPTLLLCGAALERGPSGPEGLAAAAAVAAAVFLG---RGDAGREEWQKAGRCVRALVDFRLVLVRALV-PWAEG 1284 IV+QAKTSFIPRAHAARFFGFVYG+FYIG+FL ES+LACLPVE+V NTSPPGRL VV++SVLGWKS RAKEF DG DLIDALRCSCACFPLV+PH FRGKRCFDG F+EG SAP+LDE EA G TVTISPLYASTASIRPSRYVPLSWIALPPND AIDWLYDLGYRDALFWMA EGIEH+CSHVSRL XXXXXXXXXXX RG EG + YVR SF LS C MRP RERH LDAPRFVPSLEKFVGHGSYHA AD +F VFFNVVWRPAAAL+L A+LV LL+ASSR AKDLRPLLWWL PTLLL AALE P+ EG+AAA AVAA G G+E W++A R RALVDFR VL L+ PW G Sbjct: 53 IVEQAKTSFIPRAHAARFFGFVYGMFYIGQFLLESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDGDDLIDALRCSCACFPLVLPHVFRGKRCFDGVFSEGPSAPSLDEEEAGGRKTVTISPLYASTASIRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMANEGIEHTCSHVSRLSKFSSSSNGCAPDSTMAKDSVLEGGASALRXXXXXXXXXXX--------RRGNEGGVGLKSTTAREDGEGRRNGGGQEGQFYVRPSFTLSGCRMRPRRERHAELDAPRFVPSLEKFVGHGSYHALADSLFCVFFNVVWRPAAALLLCAELVTSLLLASSRAFAKDLRPLLWWLLPTLLLGEAALEHWPTAMEGIAAAVAVAAXXXXAASREGAPGKESWREARRSARALVDFRCVLGSTLLLPWGRG 482
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: A0A6H5KQY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY3_9PHAE) HSP 1 Score: 475 bits (1223), Expect = 1.020e-159 Identity = 294/517 (56.87%), Postives = 317/517 (61.32%), Query Frame = 1 Query: 1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESMLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLVMPHNFRGKRCFDGFFAEGASAPTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGIEHSCSHVSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ--------------------------------------------------------------------------------HRGEEGXXXXXXXXXXXXXXXXKPA-----HYVRSSFALSLCHMRPHRERHPHLDAPRFVPSLEKFVGHGSYHAAADFVFVVFFNVVWRPAAALILLADLVARLLVASSRGLAKDLRPLLWWLTPTLLLCGAALERGPSGPEGLAAAAAVAAAVFLG---RGDAGREEWQKAGRCVRALVDFRLVLVRALV-PWAEG 1284 IV+QAKTSFIPRAHAARFFGFVYG+FYIG+FL ES+LACLPVE+V NTSPPGRL VV++SVLGWKS RAKEF DG DLIDALRCSCACFPLV+PH FRGKRCFDG F+EG SAP+ DE EA GL TVTISPLYASTASIRPSRYVPLSWIALPPND AIDWLYDLGYRDALFWMA EGI+H+CSHVSRL XXXXXXXXXXXXXXXXXXX RG EG YVR SF LS C MRP RERH LDAPRFVPSLEKFVGHGSYHA AD +F VFFNVVWRPAAAL+L A+LV LL+ASSR AKDLRPLLWWL PTLLL GAALE P +G+AAA AV G G+E W++A + RALVDFR VLV L+ PW G Sbjct: 11 IVEQAKTSFIPRAHAARFFGFVYGMFYIGQFLLESLLACLPVERVGRNTSPPGRLTVVLSSVLGWKSIRAKEFRDGEDLIDALRCSCACFPLVLPHVFRGKRCFDGVFSEGPSAPSFDEEEARGLKTVTISPLYASTASIRPSRYVPLSWIALPPNDPGAIDWLYDLGYRDALFWMANEGIDHTCSHVSRLSRFSSSSTGCAPDSTMAKDSVLEGGASALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAARRGNEGVGLKSTTAREDGQGRRNGVGQERQFYVRPSFTLSGCRMRPRRERHAELDAPRFVPSLEKFVGHGSYHALADSLFCVFFNVVWRPAAALLLCAELVTSLLLASSRAFAKDLRPLLWWLLPTLLLGGAALEHRPIATQGIAAAVAVXXXXXXXASREGAPGKESWREARQSARALVDFRCVLVNTLLLPWGRG 527
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: A0A835ZCR0_9STRA (Acyl transferase/acyl hydrolase/lysophospholipase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCR0_9STRA) HSP 1 Score: 120 bits (300), Expect = 3.130e-26 Identity = 68/189 (35.98%), Postives = 95/189 (50.26%), Query Frame = 1 Query: 1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESMLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLVMPHNFRGKRCFDGFFAEGASA--PTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGIEHSCSH 561 ++ K++ +P+ +G G F I ++ ++ M C+ + + P G L V+ + G ++ R F D A L DA+ S A P+ G+ C DG +E PTL E TV ++P Y S A IRPSRYVP+ W LPP D +IDWLYDLGY DAL WM + H C H Sbjct: 74 VIAYVKSTVLPQV-----WGSPAGPFRITRYCRDCMARCVNLGAAAEL--PHGELTAVVTQLSGLRALRVSAFRDAAHLADAVLASAAAIPIASAIRLDGRWCVDGGLSEFHPRLDPTLGE-------TVYVNPFYFSHADIRPSRYVPVWWAFLPPRDPNSIDWLYDLGYSDALDWMRRRRLAHCCKH 248
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: A0A7S3URP2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URP2_HETAK) HSP 1 Score: 108 bits (270), Expect = 6.170e-22 Identity = 65/190 (34.21%), Postives = 94/190 (49.47%), Query Frame = 1 Query: 1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESMLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLVMPHNFRGKRCFDGFFAEGASA---PTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGIEHSCSH 561 ++D K++ IP + G F I ++ + A + K GRL V S+ ++S R F D+ L SCA FPL + +R G + +G + P L + T+T++PL+ A I+PSRYVP W ALPP D IDWL+DLGY+D L WMA+ G H+C+H Sbjct: 96 VMDFCKSTLIPECRNN-----LAGPFKINSYVDRCLDAATDLSKYEQAN---GRLFVQTTSLPRFQSVRVSRFESALDMKTTLLASCAAFPL----SPLVRRLDGGLYVDGGLSDFQPILSKR------TITVNPLWFWKADIKPSRYVPAIWAALPPKDPSTIDWLFDLGYKDCLSWMAKNGYAHTCTH 267
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: A0A835Z0V0_9STRA (PNPLA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0V0_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 3.340e-18 Identity = 62/186 (33.33%), Postives = 89/186 (47.85%), Query Frame = 1 Query: 4 VDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESMLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLVMPHNFRGKRCFDGFFAEGASAPTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGIEHSCSH 561 V+ K IP+ A +G G F + ++++ + + ++ +M + VL +S R F +D L S A PL N G C DG ++ P + +G A T+ +SP Y A I+PSRYVP+ W LPP + IDWLYDLGYRDAL WM G++ C H Sbjct: 611 VNYCKEVLIPKCWAT--WG---GPFSLTSYVRDCAIRTMDLDLATQLRGEVTAVMTRVTPVL--RSERVSFFESREHCVDVLLASTAAVPLASAINVDGGWCIDGGLSDFQPRP-VPKGNVAE--TIFVSPFYLVDADIKPSRYVPVWWAFLPPPHSGTIDWLYDLGYRDALLWMQRRGLDFCCDH 786
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: A0A662WWA0_9STRA (PNPLA domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WWA0_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.530e-17 Identity = 61/187 (32.62%), Postives = 89/187 (47.59%), Query Frame = 1 Query: 1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKF-LKESMLACLPVEKVPDNTSP-PGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLV-MPHNFRGKRCFDGFFAEGASAPTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGIEHS 552 I D S++P AH + + G F +++ ++ + DN G++ VV S+ W S R F + ++ + SC PLV +P G+ DG + + P + G+PT+T+SP S A IRPSRYVP W PP+ + + WLYDLGY DAL W EG S Sbjct: 180 ICDSVINSYVPAAHGS----------WKGPFNMRDYLVDAITRHANTDNIHKLEGKVTVVYTSLSAWASRRVSHFKNPVHMLHTMVASCCATPLVGLPFEHEGEYVIDGGLLD--NQPLFE-----GIPTITVSPNVFSGADIRPSRYVPAWWSMYPPSQ-RDMQWLYDLGYEDALSWCIREGFPGS 348
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: H3GIV2_PHYRM (PNPLA domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIV2_PHYRM) HSP 1 Score: 95.9 bits (237), Expect = 2.340e-17 Identity = 62/187 (33.16%), Postives = 87/187 (46.52%), Query Frame = 1 Query: 1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESML--ACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLV-MPHNFRGKRCFDGFFAEGASAPTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGIEHS 552 I D ++P AHA+ + G F L A KV + G++ VV S+ W + R F L+ + SC PLV MP G+ DG + + P ++ G+ T+T++P +TA IRPSRYVP W PP+ + + WLYDLGY DAL W EG+ S Sbjct: 152 ICDSVINDYVPAAHAS----------WKGPFKMRDYLIDAITRHGKVDNMDKLHGKVTVVYTSLSSWVTRRVSHFKSPVHLLHTMVASCCATPLVGMPFEHEGEYVIDGGLLD--NQPLFED----GVRTITVTPNVFATADIRPSRYVPPWWSMYPPSQ-RDMQWLYDLGYEDALSWCVREGLPRS 321
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: A0A1V9YNE4_9STRA (Patatin-like phospholipase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNE4_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 2.410e-16 Identity = 56/182 (30.77%), Postives = 91/182 (50.00%), Query Frame = 1 Query: 1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESMLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLV-MPHNFRGKRCFDGFFAEGASAPTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGI 543 +V F+P A A+ + G + +L+E++ E++ + + R +VV +S+ W+S R F + DA+ SC P+ P G+ FDG + P +D T+T+SP Y +TA I+PS+YVP+ W PP ++I WLY+LG RDA+ W +G+ Sbjct: 60 MVGGVVQDFVPLARAS-----LGGACNVRSYLREAIARYGNFERITELNATE-RCVVVYSSISKWRSRRVTRFRNATHATDAVLASCCATPIAGFPFRIDGEWVFDGGIFD--FQPVVDAS------TITVSPFYCTTADIKPSQYVPMWWAVYPPAP-ESIQWLYELGQRDAIAWAKAKGL 226
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: A0A3F2RQZ1_9STRA (PNPLA domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQZ1_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 7.990e-16 Identity = 62/191 (32.46%), Postives = 89/191 (46.60%), Query Frame = 1 Query: 1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESMLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLV-MPHNFRGKRCFDGFFAEGASAPTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDALFWMAEEGIEHSCSHVSR 570 I D ++P AHA G F + ++L +++ V + ++ VV S+ GW S R F + L+ + SC PLV +P G+ DG + + P D G+ T+T+SP S A IRPSRYVP W PP+ + + WLYDLGY DAL SC+ V+R Sbjct: 73 ICDSVINDYVPAAHATW-----KGPFNMREYLVDAITHHADVNNMDKLND---KVTVVYTSLSGWVSRRVSNFKNPIHLLYTMVASCCATPLVGLPFKHEGEYVIDGGLLD--NQPLFD-----GISTITVSPNVFSDADIRPSRYVPAWWSMYPPSQ-RDMQWLYDLGYEDAL----------SCNEVTR 237
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Match: A0A421GFZ9_9STRA (PNPLA domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GFZ9_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 5.890e-15 Identity = 58/174 (33.33%), Postives = 83/174 (47.70%), Query Frame = 1 Query: 1 IVDQAKTSFIPRAHAARFFGFVYGIFYIGKFLKESMLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCSCACFPLV-MPHNFRGKRCFDGFFAEGASAPTLDEGEAAGLPTVTISPLYASTASIRPSRYVPLSWIALPPNDTKAIDWLYDLGYRDAL 519 I D ++P AHA G F + ++L +++ V + ++ VV S+ GW S R F + L+ + SC PLV +P G+ DG + + P D G+ T+T+SP S A IRPSRYVP W PP+ + + WLYDLGY DAL Sbjct: 164 ICDSVINDYVPAAHATW-----KGPFNMREYLVDAITHHADVNNMDKLND---KVTVVYTSLSGWVSRRVSNFKNPIHLLYTMVASCCATPLVGLPFKHEGEYVIDGGLLD--NQPLFD-----GISTITVSPSVFSDADIRPSRYVPAWWSMYPPSQ-RDMQWLYDLGYEDAL 321 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5947.14436.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5947.14436.1 >prot_L-elsbetiae_contig5947.14436.1 ID=prot_L-elsbetiae_contig5947.14436.1|Name=mRNA_L-elsbetiae_contig5947.14436.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=491bp MLACLPVEKVPDNTSPPGRLMVVMASVLGWKSFRAKEFSDGADLIDALRCback to top mRNA from alignment at L-elsbetiae_contig5947:3995..6224+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5947.14436.1 ID=mRNA_L-elsbetiae_contig5947.14436.1|Name=mRNA_L-elsbetiae_contig5947.14436.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2230bp|location=Sequence derived from alignment at L-elsbetiae_contig5947:3995..6224+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5947:3995..6224+ >mRNA_L-elsbetiae_contig5947.14436.1 ID=mRNA_L-elsbetiae_contig5947.14436.1|Name=mRNA_L-elsbetiae_contig5947.14436.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2946bp|location=Sequence derived from alignment at L-elsbetiae_contig5947:3995..6224+ (Laminarionema elsbetiae ELsaHSoW15)back to top |