mRNA_L-elsbetiae_contig5885.14347.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5885.14347.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 3.990e-8 Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = 3 Query: 1869 MVDYLLKPGADETILNDECKAAADVVGEDVEEEIQVAEDIERIRKLLPNAPADRA*FFGQRTSYML 2066 +V+ LL+ GADETI N + A D++GEDVEEE ++ ED+ER+R+LL NAPADRA +R Y++ Sbjct: 262 VVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRA---WRRRGYLI 324
BLAST of mRNA_L-elsbetiae_contig5885.14347.1 vs. uniprot
Match: A0A851Y5Z7_EOLRO (ASB3 protein (Fragment) n=1 Tax=Eolophus roseicapilla TaxID=176039 RepID=A0A851Y5Z7_EOLRO) HSP 1 Score: 62.8 bits (151), Expect = 1.100e-6 Identity = 32/78 (41.03%), Postives = 49/78 (62.82%), Query Frame = 1 Query: 1219 LHVAIQSGHGDMVNDLLENGASIDAEDTSLRGYTPLQLAARMRKTEMVQLLLLKGAGKDALDSKNRTPLYLAVLYGNV 1452 L +A+++GH D V LL++GA++ SL G+ L A+ TE++Q+LL KGAGK+ D TPL++A YG + Sbjct: 116 LFLAVENGHADTVTFLLQHGANVQGPH-SLSGWNSLHQASLQECTEIMQMLLEKGAGKECKDDFGITPLFVAAQYGKL 192
BLAST of mRNA_L-elsbetiae_contig5885.14347.1 vs. uniprot
Match: UPI001E60D468 (ankyrin repeat domain-containing protein n=1 Tax=Nostoc sp. CHAB 5715 TaxID=2780400 RepID=UPI001E60D468) HSP 1 Score: 62.8 bits (151), Expect = 1.740e-6 Identity = 36/87 (41.38%), Postives = 52/87 (59.77%), Query Frame = 2 Query: 1466 LLAAGADVGLRCTQYKTSVVHIAAEGGLVDIMRAAIERGADVDAVDTADQATPLYRATVFSEVGAINVRLGAGANIEARDRYGRTAL 1726 L+ AG D+ C KT V+H+AA G + ++ E GAD+D +D + +TPL +V AI V + +GAN+ AR+RYG TAL Sbjct: 254 LIEAGMDINAFCDTGKT-VIHLAACWGSITMIELLAELGADLDILDESRDSTPLMMTVTRRDVRAIQVLIRSGANVNARNRYGHTAL 339
BLAST of mRNA_L-elsbetiae_contig5885.14347.1 vs. uniprot
Match: A0A5N5P4Y9_9ROSI (Uncharacterized protein n=1 Tax=Salix brachista TaxID=2182728 RepID=A0A5N5P4Y9_9ROSI) HSP 1 Score: 61.2 bits (147), Expect = 1.770e-6 Identity = 33/73 (45.21%), Postives = 47/73 (64.38%), Query Frame = 1 Query: 1216 SLHVAIQSGHGDMVNDLLENGASIDAEDTSLRGYTPLQLAARMRKTEMVQLLLLKGA--GKDALDSKNRTPLY 1428 +LH+A Q GH D++++LLE GA+IDA + G+TPL AA+ RK E V+ L+ GA D DS+ PL+ Sbjct: 136 ALHLAAQGGHLDIMDELLERGANIDARTLGVCGWTPLHRAAKERKKEAVKFLIENGAFLPDDMNDSRFNPPLH 208
BLAST of mRNA_L-elsbetiae_contig5885.14347.1 vs. uniprot
Match: A0A401PMR3_SCYTO (Uncharacterized protein n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401PMR3_SCYTO) HSP 1 Score: 56.2 bits (134), Expect = 2.530e-6 Identity = 33/69 (47.83%), Postives = 38/69 (55.07%), Query Frame = 1 Query: 1252 MVNDLLENGASIDAEDTSLRGYTPLQLAARMRKTEMVQLLLLKGAGKDALDSKNRTPLYLAVLYGNVAA 1458 M+ LLE A+I+A T TP AA+ T +Q L KGA LD K RTPLYLA LYGN A Sbjct: 1 MIELLLEKHANIEARTTE-EWQTPFHYAAKYDATNSLQCLHNKGANIHVLDYKQRTPLYLAALYGNCQA 68
BLAST of mRNA_L-elsbetiae_contig5885.14347.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 61.2 bits (147), Expect = 1.130e-5 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 612 AANAGKQEAAEAVDLLLRSGADETILNDDGEAAADVVAEYVEESDQVTEDIERVHELLA 788 AA AG AE VDLLLR GADET ++++G AAD+V EESD + ED++RV +LLA Sbjct: 630 AAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLA 688
BLAST of mRNA_L-elsbetiae_contig5885.14347.1 vs. uniprot
Match: D7FQ25_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ25_ECTSI) HSP 1 Score: 60.5 bits (145), Expect = 1.570e-5 Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 3 Query: 612 AANAGKQEAAEAVDLLLRSGADETILNDDGEAAADVVAEYVEESDQVTEDIERVHELLATL 794 AA AG AE VDLLLR GADET ++++G AAD+V EESD + ED++RV +LL ++ Sbjct: 467 AAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVGLKTEESDSLAEDVDRVRKLLGSV 527
BLAST of mRNA_L-elsbetiae_contig5885.14347.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE) HSP 1 Score: 57.4 bits (137), Expect = 1.690e-5 Identity = 97/147 (65.99%), Postives = 109/147 (74.15%), Query Frame = 3 Query: 345 AAIERGADVHAVDTAQVTPLLYAAWHNKVEAINVLVKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAAANAGKQEAAEAVDLLLRSGADETILNDDGEAAADVVAEYVEESDQVTEDIERVHELL 785 AAIERGA+V A D + TP +AA N VE I+VLV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A A AG + E VD LLRSGADETIL+ +G AA D+++ V E +RV +LL Sbjct: 3 AAIERGAEVDAADAVERTPPHHAALLNNVEEIDVLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSATAVAGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSGEQDDRVRDLL 149
BLAST of mRNA_L-elsbetiae_contig5885.14347.1 vs. uniprot
Match: V3ZWH9_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZWH9_LOTGI) HSP 1 Score: 54.7 bits (130), Expect = 3.020e-5 Identity = 28/76 (36.84%), Postives = 44/76 (57.89%), Query Frame = 1 Query: 31 VNDLLENEASVASKDTNGSTPLHMAAEEGKTEVVELLLLKGEEEDGLDNGGWTPLCMAVWYGHLAAALALLAADAD 258 V LE + + ++ +G +H AA+ G+ E++E L+ KG + + LD+ G TPLC AV+ GH+ LL AD Sbjct: 16 VKTALEEQKGLQNETISGRKLIHFAADYGQPEMIEFLVHKGADVNALDSHGITPLCAAVFEGHVKCVKILLEKGAD 91
BLAST of mRNA_L-elsbetiae_contig5885.14347.1 vs. uniprot
Match: A0A8K0SY76_9HYPO (Putative multiple ankyrin repeats single kh domain protein n=1 Tax=Stachybotrys elegans TaxID=80388 RepID=A0A8K0SY76_9HYPO) HSP 1 Score: 59.7 bits (143), Expect = 4.110e-5 Identity = 36/94 (38.30%), Postives = 52/94 (55.32%), Query Frame = 1 Query: 1252 MVNDLLENGASIDAEDTSLRGYTPLQLAARMRKTEMVQLLLLKGAGKDALDSKNRTPLYLAVLYGNVAAALSPGCRCGRRPSVHPIQNVGSAYS 1533 ++ LL+ G ++ E TSL TPL LA R R+ ++V++LLL GA D +D K RTPL LA G A G +V P ++ GS ++ Sbjct: 1099 LIQLLLDRGCKVNVE-TSLSRTTPLMLAVRERRADIVKMLLLDGADADVVDYKGRTPLSLATEIGGETAIQM----MGNLLAVEPSKDDGSLHN 1187 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5885.14347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5885.14347.1 >prot_L-elsbetiae_contig5885.14347.1 ID=prot_L-elsbetiae_contig5885.14347.1|Name=mRNA_L-elsbetiae_contig5885.14347.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=77bp MAAEEGKTEVVELLLLKGEEEDGLDNGGWTPLCMAVWYGHLAAALALLAAback to top mRNA from alignment at L-elsbetiae_contig5885:4682..8067+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5885.14347.1 ID=mRNA_L-elsbetiae_contig5885.14347.1|Name=mRNA_L-elsbetiae_contig5885.14347.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3386bp|location=Sequence derived from alignment at L-elsbetiae_contig5885:4682..8067+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5885:4682..8067+ >mRNA_L-elsbetiae_contig5885.14347.1 ID=mRNA_L-elsbetiae_contig5885.14347.1|Name=mRNA_L-elsbetiae_contig5885.14347.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=462bp|location=Sequence derived from alignment at L-elsbetiae_contig5885:4682..8067+ (Laminarionema elsbetiae ELsaHSoW15)back to top |