mRNA_L-elsbetiae_contig586.14323.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig586.14323.1 vs. uniprot
Match: D8LBT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT6_ECTSI) HSP 1 Score: 240 bits (613), Expect = 6.600e-70 Identity = 150/242 (61.98%), Postives = 185/242 (76.45%), Query Frame = 1 Query: 136 SCRRDVRDLRRQCQRLSQGNEELKSSADAARVEACASKRRAAAAEQELEAERKVGAQLRRIRDTLQVAAASDKKSIARLQAELCKGALSSRLLDRARCLKQAVEKLEGRSNAQALALSAKTAELEGSRREARAIAVALGARTGTPSPGCGFNKRPVTVDELMEIGRAKLMNHDLALEMSRLSETSETLATEKQELEERLSQESAEVKRSRAEAAKARGMFERXXXXXXXXXXXASKANASAR 861 SCRR+VR+LR QC++LS N+ELK +ADA R EACAS+RRA AA++ELEAERK G LRR+RD LQVAAA+D+KSI RLQ +LCKG+ SSRLLD+ARCLK+ VE+LE +S QA ALSAKTAELE SRREARA+A ALG R S G PVTVDEL+E+GRAKLMNHDLAL M+RLSE S LA+EKQELE+ L +++AE++R +A+ + +G ER A++ANAS R Sbjct: 9 SCRREVRELRLQCRKLSSSNDELKLAADARRKEACASRRRADAAQKELEAERKSGVVLRRVRDALQVAAAADRKSIDRLQGQLCKGSPSSRLLDKARCLKRTVEELESKSTEQAEALSAKTAELEASRREARALAAALGVRAEKASLA-GVATGPVTVDELLEVGRAKLMNHDLALGMARLSEASGVLASEKQELEDLLVKKTAEIERCKAQTTEVQGELERERKVADGHRAAAAEANASTR 249 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig586.14323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig586.14323.1 >prot_L-elsbetiae_contig586.14323.1 ID=prot_L-elsbetiae_contig586.14323.1|Name=mRNA_L-elsbetiae_contig586.14323.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp MAEADASCRRDVRDLRRQCQRLSQGNEELKSSADAARVEACASKRRAAAAback to top mRNA from alignment at L-elsbetiae_contig586:18648..23738+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig586.14323.1 ID=mRNA_L-elsbetiae_contig586.14323.1|Name=mRNA_L-elsbetiae_contig586.14323.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5091bp|location=Sequence derived from alignment at L-elsbetiae_contig586:18648..23738+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig586:18648..23738+ >mRNA_L-elsbetiae_contig586.14323.1 ID=mRNA_L-elsbetiae_contig586.14323.1|Name=mRNA_L-elsbetiae_contig586.14323.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1494bp|location=Sequence derived from alignment at L-elsbetiae_contig586:18648..23738+ (Laminarionema elsbetiae ELsaHSoW15)back to top |