mRNA_L-elsbetiae_contig5804.14238.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5804.14238.1
Unique NamemRNA_L-elsbetiae_contig5804.14238.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: D7FGR1_ECTSI (OTU domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR1_ECTSI)

HSP 1 Score: 373 bits (957), Expect = 2.520e-122
Identity = 199/289 (68.86%), Postives = 225/289 (77.85%), Query Frame = 2
Query:  185 QVMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRFFIPFEKARLTFHLSYHGEHHYNSVRATGDEGAGPARPITLQTPTTKNAPRADGSPWPEEEAAVALSCPWARQPDVLAALESTGGRGEDAIELLIAARNEPGLEGKVNGVGDTAVETEGTGKANTNSGGDGSVLDTLLQGSGATDEGRGHNGAAGLATEGGKKKKGDKAAKKVTRSADCPCGSGVKYKKCCRKKDAAIARGQIAPPAEPESTSGDSSVVDDLGSLVI 1051
            +VM+H++ NR+ FEPYMEDDE+F DYL RMRG+AEWGG+QELVAASQLYK N+VVHQFKAPRFFIP EKAR T HLSYHGEHHYNSVRA GDE  GPA PITLQTPT+K       SPWPEEEAAVA SCPWA  P+++AALE+TGGRG+DAIELLIAARNEPGLE    GV +TA + +GTGK       DG       Q +G   EG+G  G        G  KK +KAAKKV R++DCPCGSG+KYKKCCRKKDAAIARGQI  PAEP++ SGDSSVVDDLGSLVI
Sbjct:   89 KVMDHLQRNREVFEPYMEDDETFGDYLERMRGEAEWGGNQELVAASQLYKTNVVVHQFKAPRFFIPCEKARRTIHLSYHGEHHYNSVRAIGDEANGPALPITLQTPTSKGGSHKRESPWPEEEAAVARSCPWASPPNIVAALETTGGRGDDAIELLIAARNEPGLE---EGVDNTAGDKKGTGKLE-----DGGDSGEKPQENGRPGEGKGRGG--------GVAKKSEKAAKKVARASDCPCGSGLKYKKCCRKKDAAIARGQIDAPAEPDA-SGDSSVVDDLGSLVI 360          
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: A0A6V1PSA8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PSA8_HETAK)

HSP 1 Score: 165 bits (418), Expect = 5.580e-42
Identity = 127/327 (38.84%), Postives = 160/327 (48.93%), Query Frame = 2
Query:  185 QVMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRFFIPFEKAR----LTFHLSYHGEHHYNSVRATGDEGAGPARPITLQ--TPTTKNAPRADGSPWP-------------EEEAAVALSCPWARQPDVLAALESTGGRGEDAIELLIAARNEPGLEGKVNGVGDTAVETEGTGKANTNSGGDGSVLDTL---------LQGSGATDEGRGHNGAAGLATEGGKKKKGDKAAKK--VTRSADCPCGSGVKYKKCCRKKDAAIARGQI--------APPAEPESTSGDSSVVDDLGSLVI 1051
            ++M+HIE + D F  +MEDDE F  YL RMR D +WGGHQEL AASQL++  ++VHQ++APR  I FE A        HLSYHGE HYNSVRA GD G GP  PI L+   P +K   RA G P P             E+   V LS PWA    V  A+    G G  AIEL+++   E  LE +         ++E TG+ NT +    SV+ +          L      D+    + A      G +     +  K   VTR A CPCGSG+KYKKCCRK+D    R Q         A         G    + D GSL I
Sbjct:   98 RIMDHIEAHGDLFALFMEDDEPFAGYLSRMRADRQWGGHQELYAASQLFRTTILVHQYQAPRLEISFEGADGRRPHPLHLSYHGESHYNSVRAVGDPGGGPPLPINLRQSAPPSK---RAGGGPAPGGGEGKQQGPGTAEDWELVRLSVPWADGALVERAMARARGEGIQAIELIVSG--EVYLEEEDQSP--HTSQSESTGEGNTGADSKESVVHSSQASNQECNNLNPEEEGDQSSSTSKADVCENGGDESTLSGRTIKNNAVTRGAKCPCGSGLKYKKCCRKRDLLKKRIQSNSAECNDGAEEWNGHDVPGGDDSLQDFGSLAI 417          
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: A0A7S2WN45_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WN45_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.410e-40
Identity = 118/318 (37.11%), Postives = 161/318 (50.63%), Query Frame = 2
Query:  173 PPLPQVMNHI----ETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRFFI----PFEKARLTFHLSYHGEHHYNSVRATGDEGAGPARPITLQTP---------TTKNAPRADGSPWPEEEAAVALSCPWARQPDVLAALESTGGRGEDAIELLIAA--RNEPGLEGKVNGVGDT--AVETEGTGKANTNSGGDGSVLDTLLQGSGATDEGRGHNGAAGLATEGGKKKKGDKAAKKVTRSADCPCGSGVKYKKCCRKKDAAIARGQIAPPAEPE----STSGDSSVVDDLGSLVI 1051
            PPL  +  HI       R+ FEP++EDDESFDDY+ RM  D EWGGHQEL AA+Q Y  N+V+HQ  APR  +    P E A  T HLSYHGE HYNSVRA  D G GPA+ I +  P         T + +  A+     E++  V +S PW     +   L    G  + A+ELL++     +P  EG  + V     A+   G   A +++G      D+  +   A D+G G   A+G        K G K+ K   R+  CPCGSG KYKKCC K++      +    AE +    S++ ++S   D GS  +
Sbjct:    6 PPLSPLWQHIVDFINAEREQFEPFIEDDESFDDYIQRMGSDGEWGGHQELYAATQAYNVNIVIHQLDAPRLELYASQP-EFATATLHLSYHGEFHYNSVRAADDFGPGPAQAIAMDRPPMPAAATGGTDRGSSSAENLSAVEKQ--VRISVPWVDLEVIRGTLREVNGDADAAVELLVSGFIPPDPAAEGDHDAVSQNPGAIGVVGGEVAASSAG----SADSSPE---AGDQGGGKLSASG--------KSGQKSGK-TARADLCPCGSGKKYKKCCMKQEKRAKAFRAKKEAEQQKAVASSNSNTSGSADGGSEAV 304          
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: A0A7S2WLR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLR9_9STRA)

HSP 1 Score: 156 bits (395), Expect = 9.150e-39
Identity = 114/309 (36.89%), Postives = 159/309 (51.46%), Query Frame = 2
Query:  188 VMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRFFI----PFEKARLTFHLSYHGEHHYNSVRATGDEGAGPARPITLQTP---------TTKNAPRADGSPWPEEEAAVALSCPWARQPDVLAALESTGGRGEDAIELLIAA--RNEPGLEGKVNGVGDT--AVETEGTGKANTNSGGDGSVLDTLLQGSGATDEGRGHNGAAGLATEGGKKKKGDKAAKKVTRSADCPCGSGVKYKKCCRKKDAAIARGQIAPPAEPE----STSGDSSVVDDLGSLVI 1051
            +++ I   R+ FEP++EDDESFDDY+ RM  D EWGGHQEL AA+Q Y  N+V+HQ  APR  +    P E A  T HLSYHGE HYNSVRA  D G GPA+ I +  P         T + +  A+     E++  V +S PW     +   L    G  + A+ELL++     +P  EG  + V     A+   G   A +++G      D+  +   A D+G G   A+G        K G K+ K   R+  CPCGSG KYKKCC K++      +    AE +    S++ ++S   D GS  +
Sbjct:  114 IVDFINAEREQFEPFIEDDESFDDYIQRMGSDGEWGGHQELYAATQAYNVNIVIHQLDAPRLELYASQP-EFATATLHLSYHGEFHYNSVRAADDFGPGPAQAIAMDRPPMPAAATGGTDRGSSSAENLSAVEKQ--VRISVPWVDLEVIRGTLREVNGDADAAVELLVSGFIPPDPAAEGDHDAVSQNPGAIGVVGGEVAASSAG----SADSSPE---AGDQGGGKLSASG--------KSGQKSGK-TARADLCPCGSGKKYKKCCMKQEKRAKAFRAKKEAEQQKAVASSNSNTSGSADGGSEAV 403          
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: A0A7S1CP50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CP50_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.770e-24
Identity = 71/165 (43.03%), Postives = 95/165 (57.58%), Query Frame = 2
Query:  185 QVMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRFFIPFEK-ARLTFHLSYHGEHHYNSVRATGDEGAGPARPITL--QTPTTKNAPRADGSPWPEEEAAVALSCPWARQPDVLAALESTGGRGEDAIELLIAARNE 670
            +VM+ IE +RD F+ ++EDDE F+DY+ R+R +AEWGGH EL AAS+    N+VVHQ   PR+ +   +  R   HLSYH   HY SVR   D G GPA PI +  +      APR D +   ++E  +  S P      V   L + GG  E AIE+LIA  +E
Sbjct:  165 EVMDFIEAHRDDFQWFIEDDEPFEDYVARLRTNAEWGGHLELQAASRQLGRNVVVHQLSMPRWELQNARDGRDALHLSYHDGEHYASVRMRSDPGDGPALPIVIGARHEVDAAAPRRDPADPSDDELLIMRSAPGKGLARVREVLGNMGGDVELAIEVLIAETDE 329          
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: W7U4L0_9STRA (SEC-C motif-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4L0_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.630e-22
Identity = 86/262 (32.82%), Postives = 116/262 (44.27%), Query Frame = 2
Query:  188 VMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRFFIPFEKARLTFHLSYHGEHHYNSVRATGD--EGAGPARP------ITLQTPTTKNAPRADGSPWPEEEAAVALSCPWARQPDVLAALESTGGRGEDAIELLIAARNEPGLEGKVNGVGDTAVETEGTGKANTNSGGDGSVLDTLLQGSGATDEGRGHNGAAGLATEGGKKKKGDKAAKKVTRSADCPCGSGVKYKKCCRK 949
            V++ IE +   F P++EDDE F DY+ RMR + EWGG QE+ AAS+ +  N+V+HQ   PRF I F+ +  T HLS+HG  HYNS+RA  D      PA+P      + L T  T        SP          S P A   +          RG++  EL    R E         + D + E++G+             +D         DE R        ATE           K + R   CPC SG K++KCCRK
Sbjct:   96 VIDFIEAHETDFAPFVEDDEKFSDYVHRMRNEGEWGGQQEICAASRCFHVNVVIHQLDCPRFEILFKASAPTIHLSFHGASHYNSIRAWDDPCRMGDPAKPFLALTALPLSTSKTSTLTSFSSSPSLAPHRREGKSIPGAEIKE----------RGDEDDELRRKTRKE---------MADISDESDGS-------------IDR--------DEPR--------ATE----------EKVLKRGGQCPCRSGKKWRKCCRK 299          
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: A0A2K1L0W0_PHYPA (OTU domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L0W0_PHYPA)

HSP 1 Score: 108 bits (271), Expect = 3.290e-22
Identity = 86/266 (32.33%), Postives = 124/266 (46.62%), Query Frame = 2
Query:  188 VMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRF----FIPFEKARLTFHLSYHGEHHYNSVRATGDEGAGPARPITLQ---TPTTKNAPRADGSPWPEEEAAVAL------SCPWARQPDVLAALESTGGRGEDAIELLIAARNEPGLEGKVNGVGDTAV-ETEGTGKANTNSGGDGSVLDTLLQGSGATDEGRGHNGAAGLATEGGKKKKGDKAAKKVTRSADCPCGSGVKYKKCC 943
            V+N+++ +R+ FEP++ED+  FD+YL  MR +  W GH E+ A S + + N+ +HQ K PR+    FI  +    T HLSYH   HYNSVR   D G GPA+P  ++   TP ++  P  D      +    A       S     +  V   L    G  + AIE LIA   E G +    G  +     +  TG  N  S  D +     L    A++ GR  N ++              +++ V R+  CPCGS  KYK CC
Sbjct:   68 VVNYLQEHREEFEPFVEDEVPFDEYLKTMREETTWAGHMEIQATSLVTRTNICIHQLKTPRWQIRNFITADTT--TIHLSYHDGEHYNSVRRQDDPGVGPAKPFIIEGDATPASQPPPVKDNIKDKSKVVEAATIKRIMGSSGCTNEKRVREILLDVHGDADTAIEYLIA---EAGGDASSTGSDENDPGSSAATGDQNRISVSDDAESARSLSSHTASESGRIGNASS-------------VSSQSVGRNKPCPCGSKKKYKSCC 315          
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: A0A7I4DBQ9_PHYPA (OTU domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4DBQ9_PHYPA)

HSP 1 Score: 98.6 bits (244), Expect = 1.910e-19
Identity = 50/121 (41.32%), Postives = 73/121 (60.33%), Query Frame = 2
Query:  188 VMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRF----FIPFEKARLTFHLSYHGEHHYNSVRATGDEGAGPARPITLQ---TPTTKNAPRAD 529
            V+N+++ +R+ FEP++ED+  FD+YL  MR +  W GH E+ A S + + N+ +HQ K PR+    FI  +    T HLSYH   HYNSVR   D G GPA+P  ++   TP ++  P  D
Sbjct:   68 VVNYLQEHREEFEPFVEDEVPFDEYLKTMREETTWAGHMEIQATSLVTRTNICIHQLKTPRWQIRNFITADTT--TIHLSYHDGEHYNSVRRQDDPGVGPAKPFIIEGDATPASQPPPVKD 186          
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: A0A6B2L5Q9_9EUKA (OTU domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L5Q9_9EUKA)

HSP 1 Score: 100 bits (250), Expect = 2.490e-19
Identity = 49/93 (52.69%), Postives = 62/93 (66.67%), Query Frame = 2
Query:  188 VMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRFFIP-FEKARLTFHLSYHGEHHYNSVRATGDE 463
            + N+IE NR+ FEP++EDDE F DYL RMR +A WGGH E+ A S  Y  N+ +HQ   PR+ I  F+ +  T HLSYH   HY+SVR  GDE
Sbjct:   88 ICNYIEKNREQFEPFIEDDEPFTDYLKRMRKNATWGGHLEIQACSLAYTVNITIHQLGQPRWDIKNFDDSVKTIHLSYHQGEHYSSVRKIGDE 180          
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: A0A8J4F564_9CHLO (OTU domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F564_9CHLO)

HSP 1 Score: 99.0 bits (245), Expect = 1.710e-18
Identity = 99/310 (31.94%), Postives = 136/310 (43.87%), Query Frame = 2
Query:  185 QVMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRFFI---PFEKARLTFHLSYHGEHHYNSVRATGDEGAGPARPITLQ---TPTTKNAPR---ADGSPWPE-EEAAVALSCPWARQPDVLAALESTGGRGEDAIELLIAAR----NEPGLEGKVNGVGDTAV-------ETEG----TGKANTNSGGDGSVLDTLLQGSGATDEGRG-------HNGAAGLATEGGKKKK------------------GDKAAKKVTRSAD-------CPCGSGVKYKKCC 943
            +V++++  +++ F P++EDDESFD Y+ RM+ D  W G+ E+VAAS+  +AN+ ++Q   PR+ +   P + A +  HLSYH   HYNSVR   D G G   PI ++   T   +  PR    DG+ W E +E  VA S        V  ALE   G  E AIE +I A     +E    G      D AV        T G    T   +    G  S+    +  SG T +G         H+ A G A                          G  AA+K   +A        CPCGS  KYK CC
Sbjct:   95 RVVSYMVEHQEDFTPFVEDDESFDSYIARMKKDGVWAGYMEVVAASRCLQANLTIYQAGQPRWRVVHHPEDSAPM-LHLSYHDGQHYNSVRCADDFGTGSPAPIVIRGDGTLAARPPPRQKAGDGN-WDEKDERRVASSTACTDMALVCKALEEARGDVEAAIERVIEALAAEPSEAAEPGATVSTADPAVVPTPPPPSTTGIAGSTDPPSEQGNGSQSMGSNDIPASGTTSQGLAAVPASVQHDNAGGAAPSAASPPSPSGVVGKGIRVTSTRVTAGKVAARKAVGTAGGPSNNKPCPCGSHKKYKACC 402          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGR1_ECTSI2.520e-12268.86OTU domain-containing protein, putative n=1 Tax=Ec... [more]
A0A6V1PSA8_HETAK5.580e-4238.84Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2WN45_9STRA1.410e-4037.11Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2WLR9_9STRA9.150e-3936.89Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1CP50_9STRA1.770e-2443.03Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
W7U4L0_9STRA1.630e-2232.82SEC-C motif-containing protein n=1 Tax=Nannochloro... [more]
A0A2K1L0W0_PHYPA3.290e-2232.33OTU domain-containing protein n=3 Tax=Physcomitriu... [more]
A0A7I4DBQ9_PHYPA1.910e-1941.32OTU domain-containing protein n=1 Tax=Physcomitriu... [more]
A0A6B2L5Q9_9EUKA2.490e-1952.69OTU domain-containing protein n=1 Tax=Arcella inte... [more]
A0A8J4F564_9CHLO1.710e-1831.94OTU domain-containing protein n=2 Tax=Volvox afric... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5804contigL-elsbetiae_contig5804:1428..5241 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.5
Seed ortholog evalue1.8e-100
Seed eggNOG ortholog2880.D7FGR1
Preferred nameotud3
KEGG koko:K13717
Hectar predicted targeting categoryother localisation
EggNOG free text desc.thiol-dependent ubiquitin-specific protease activity
EggNOG OGsKOG2605@1,KOG2605@2759
EC3.4.19.12
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Ec32 ortholog descriptionSEC-C motif
Ec32 orthologEc-04_001190.1
Exons4
Model size1654
Cds size864
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5804.14238.1prot_L-elsbetiae_contig5804.14238.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5804 1778..4641 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816624.4673905-UTR-L-elsbetiae_contig5804:1427..16141622816624.4673905-UTR-L-elsbetiae_contig5804:1427..1614Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5804 1428..1614 +
1691683693.472862-UTR-L-elsbetiae_contig5804:1427..16141691683693.472862-UTR-L-elsbetiae_contig5804:1427..1614Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5804 1428..1614 +
1622816624.4796162-UTR-L-elsbetiae_contig5804:1774..17771622816624.4796162-UTR-L-elsbetiae_contig5804:1774..1777Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5804 1775..1777 +
1691683693.4890943-UTR-L-elsbetiae_contig5804:1774..17771691683693.4890943-UTR-L-elsbetiae_contig5804:1774..1777Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5804 1775..1777 +
1622816624.529527-UTR-L-elsbetiae_contig5804:4641..52411622816624.529527-UTR-L-elsbetiae_contig5804:4641..5241Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5804 4642..5241 +
1691683693.5440886-UTR-L-elsbetiae_contig5804:4641..52411691683693.5440886-UTR-L-elsbetiae_contig5804:4641..5241Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5804 4642..5241 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816624.4918406-CDS-L-elsbetiae_contig5804:1777..19211622816624.4918406-CDS-L-elsbetiae_contig5804:1777..1921Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5804 1778..1921 +
1691683693.5113883-CDS-L-elsbetiae_contig5804:1777..19211691683693.5113883-CDS-L-elsbetiae_contig5804:1777..1921Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5804 1778..1921 +
1622816624.5031576-CDS-L-elsbetiae_contig5804:2146..23421622816624.5031576-CDS-L-elsbetiae_contig5804:2146..2342Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5804 2147..2342 +
1691683693.523783-CDS-L-elsbetiae_contig5804:2146..23421691683693.523783-CDS-L-elsbetiae_contig5804:2146..2342Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5804 2147..2342 +
1622816624.519802-CDS-L-elsbetiae_contig5804:4117..46411622816624.519802-CDS-L-elsbetiae_contig5804:4117..4641Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5804 4118..4641 +
1691683693.5339103-CDS-L-elsbetiae_contig5804:4117..46411691683693.5339103-CDS-L-elsbetiae_contig5804:4117..4641Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5804 4118..4641 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5804.14238.1

>prot_L-elsbetiae_contig5804.14238.1 ID=prot_L-elsbetiae_contig5804.14238.1|Name=mRNA_L-elsbetiae_contig5804.14238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=288bp
MNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKAN
MVVHQFKAPRFFIPFEKARLTFHLSYHGEHHYNSVRATGDEGAGPARPIT
LQTPTTKNAPRADGSPWPEEEAAVALSCPWARQPDVLAALESTGGRGEDA
IELLIAARNEPGLEGKVNGVGDTAVETEGTGKANTNSGGDGSVLDTLLQG
SGATDEGRGHNGAAGLATEGGKKKKGDKAAKKVTRSADCPCGSGVKYKKC
CRKKDAAIARGQIAPPAEPESTSGDSSVVDDLGSLVI*
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mRNA from alignment at L-elsbetiae_contig5804:1428..5241+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5804.14238.1 ID=mRNA_L-elsbetiae_contig5804.14238.1|Name=mRNA_L-elsbetiae_contig5804.14238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3814bp|location=Sequence derived from alignment at L-elsbetiae_contig5804:1428..5241+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGTAGAGCAGATCGGATGCAAGATCAAGTTTATCGAAGGCGATGGCAA CTGTCTCTTCCGCAGCCTCGCCGATCAGTTAGAAGGGCGGCCGCAAGACC ACTCTGCTGTCCGAGCCAAGGTGGGACCGGCGTTAGCAGAGTTGGACTTC TTCTCTGGAATGACTCGTGATCCCGCCTCTTCCGCAGGTATTTATTAGAT ATGGTAAAGATGAAGGAGGCAGCGCTTGTAGTTTTTCAAGTACATATGTA CAGCAGTACATGTGTATGTACATACATAGCAATTTTGGCGGCGGTGGGCG CAGTTTCGTTTTTATGTAGCACGACGCCGCCGCATCCACCGCCGCAGGTT ATGAACCACATAGAGACCAACAGAGACGCTTTCGAGCCGTACATGGAAGA TGACGAGTCTTTTGACGACTACCTGGGGCGCATGCGAGGAGATGCGGAGT GGGGAGGGCATCAAGAGCTTGTCGCCGCAAGCCAGCTTTACAAGGTGCGA GTGGTCGAAGCGGACCGGTTTTCTTCACTGATAAGACTAGCCCACGGTGT CGTAACCAGTATCTCGTGTGGCGAATTCGCGGGTGTCGGCCTTGTCCGCT TGAGCTGGGTCTGCGCCATCCCCGTTCCCTGATGTGGCGAGCTCCCCACC CGACCCCAGAGTGACATTTTGCGGCGTTACGAGAGCCCCGACTTGAATTG CTCCTTGTTCCTTGAGCAGGCCAACATGGTTGTGCACCAGTTCAAGGCTC CTCGCTTTTTCATCCCTTTCGAGAAGGCAAGATTGACTTTCCACCTGAGC TATCACGGAGAACACCACTACAATAGCGTGAGGGCGACAGGCGACGAAGG CGCAGGACCAGCGCGACCAATTACTCTTCAGACCCCTACGACGAAGAATG CCCCGCGCGCTGACGGTGAGACAAATTGCATACAGATAATTCTTTTTTTG CCGCAAAGTTGCTCAGGCGACTGTACGCTTATTACCCAAGTAGCATTCAG TCGTTGACTCTGGACGATATTTCGTATGCCACCTCTACCTTGACACACAT CGCGCACATTGGGTGACATGTTGTGAGCGCGGATGTATTGCCAAGGGTAG AACAGCCCTATACAGAGCGCCGAGAGCGCAGGGACGTCTATCCTTGAACA CTCGAGGGTTCGACAGGATTTTTGTTCTACATATAACTTCGGAACTAAGT TCCCCAGTGCAGCACGAGAAACCGAGAGGCTAAAGAGAACCGAGAGAGGG GAGTTGGAGGGTAACAAAGCTGATTGGAAGCTCGACGCGTAGCTTTACTT TTTAGCTTCGAGGGTCCGCTGATCGGCTTGTCGCTGAGCGTCCGTGTTGG CAAGACGTTCAAGCCGGGCGACGTTACGAAAATTGGCATTCCCTGTTTCC TCGAGATGCCTTTGACGTGATAAAGATCAGCTGAAATAGAACCATCCTCG TAGTTGGAAAGTGCGGTTGATGACGTCGTTACAAATATAAGCTCTGTTCC ATTTCATTTGGCAATTTTGATTTACTTTTTGCTGGCTCTTTTCCCTTGTC GGGAGATCGATCTCTCTTGGGTGGCATTCCGCAGCATGCAACAAATACTC CGTGTATGTAGGCTAAAAGCGTCGCCGCGACACTGTCCTCGTACCTATGT ATGAGACACAGGAGTGTTGAAGCGTAGGATAACTTTTAGGTTGGCACGAT ATTTATATGGAAAATCGATTGAGCACGTCATGCACTATGAAATGGGTTGT CCCGAAGGGAACTGAGCGATTTTCGACCCAGGGACGGAAGAGGACTTTGC AACATTGTCGCTACTGCTGTACGCGCTTCCGTGTGTGTTTCCACACGCTG TATGTAGCACCATCACTGCACAAACTATTACCATTGGCAGAGAGTGCACG TTGGAATTATATGGACCGCTTTCTTTCAAAAAAATCAAAGAGTCATCGGC CAAAACACAGGCGAAAAAGGAGCGAGAGGCCAACATACGCTTAAGGGGTT CGAATTGAAAATACGGGCTACGGACACGTATCGCCGTGGAAAGGAGGGCG GAATTAGCCGTTAGGACTCCTGTTGGGAGCCAGGAAAAGACAGATTCCTC GTGTCTAAATACGCGCACACCAAAGGTGTATGGGGATCGACGACAAACTG GCGATTACTCAAAGGTTTGAATGTTTCAAGGTTCGGGGATGATGTGTGTG TGTCTGTGTGTGGAATGGTGGCTTGCACACCCGTTTTCCAGCCAACTGGC GCCAGACAAAACAGATGACCAAAAAAGCTTACACAACCCTTAGAATACCT ATGCGCATGGACCCACGCCTTTTCAGGCCCGTAGCTGTTTCAGTTTGTGG AGTTCGGCGAGTGGAGATTTTTCGTGGATTTGCTCGCCGCTAACGGAGCG ACTGGGGAGTGTTTGAAGTTATTTCCTTCGTCGAAAGATTGAAATCGAGC GTGAGACTGGTGTGTATCCGTGCACCGCCAGAAGAAGTCGTTTGATTCGG CAGGGAACGAGATATCCGGACGGAAACCAGTGGAATCTCATCGGAACCAC TTTCGGGGCAAACATTTTGATCAAAAAAGTGCCAAATTTCCTCTTATACA GTACGCGATCAGAATTGCCGCGACAGAACCATACGCTCAAAACCTGTTTA GCTGATACTCTTCATTCGCATTTGACGGCTTTGCTCACAGGCAGTCCGTG GCCCGAGGAGGAAGCAGCGGTGGCCCTAAGCTGCCCATGGGCCAGGCAGC CGGATGTATTGGCAGCTTTAGAATCCACTGGAGGGAGAGGCGAGGACGCC ATCGAGCTCCTCATCGCCGCTCGGAACGAGCCCGGCCTAGAGGGAAAAGT GAACGGTGTTGGCGATACAGCTGTAGAAACAGAGGGTACCGGGAAGGCTA ACACTAACAGCGGCGGCGATGGCTCCGTACTTGATACGTTGCTGCAGGGG AGCGGGGCAACAGACGAAGGCCGAGGACATAACGGGGCAGCAGGCCTTGC GACGGAGGGTGGGAAAAAGAAGAAAGGCGACAAGGCCGCCAAGAAGGTCA CCAGATCTGCGGATTGCCCTTGCGGGAGCGGGGTAAAGTACAAGAAGTGC TGCCGGAAAAAAGATGCCGCGATAGCCCGGGGACAAATTGCCCCTCCTGC TGAGCCAGAGAGCACATCAGGAGATTCGTCGGTGGTGGATGATTTGGGGT CGTTAGTGATCTGATGAAGCTGCTGGAAAATTTGGCGATCCGGTGGGAAA ATCAAAATCCGAAAGATAGTTTTTGCTTGGTTCCACTTATCCAAGCAAGC GCTGTTTGTTCTTTAGTCCAACCACCGGAGGAGTGATGACGTGGTTGTTT CGTATCTTGTGTGTGGCCTAGGAGTGTGTGTGTCTGTTCGTACTTTCGGC TTGTCTTGTCCGAGGTCCTGTTTGCCCTTTCTTGTTTTTCTGTCATGTAG GCGGTATAATCGGCGGGAAGGACTAGCTTTGTGAGCCTGACCGGCGAGAA CCCGGCACGGAAAACCGTGGCATTGTTAGGTACAAAAAAGAACCAGGGGG TGTATACCCCCGGTTGGGTATGTTGGCTTATTCATTTTGTTTTTTCCTCG CATAGCGTGTAGAGGGGAGCGGGGGGCTCCACACTATTTGTCTTTGATTT TTATCGGTTTGCTGACCCTTCGGGTCCATTTTATGTTCGTATACCTTTTT TAGGTGTAAGTTATCTTGTGACCGCGGGAACTGACCGCATCAAGCGTTGG AATAGTACGGACATACGGAGGTACTGGTTGGAGAGATCGGAACAGCTTTT TTAATGTGAAGAAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5804:1428..5241+

>mRNA_L-elsbetiae_contig5804.14238.1 ID=mRNA_L-elsbetiae_contig5804.14238.1|Name=mRNA_L-elsbetiae_contig5804.14238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1728bp|location=Sequence derived from alignment at L-elsbetiae_contig5804:1428..5241+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACCACATAGAGACCAACAGAGACGCTTTCGAGCCGTACATGGAAGA
TGACGAGTCTTTTGACGACTACCTGGGGCGCATGCGAGGAGATGCGGAGT
GGGGAGGGCATCAAGAGCTTGTCGCCGCAAGCCAGCTTTACAAGATGAAC
CACATAGAGACCAACAGAGACGCTTTCGAGCCGTACATGGAAGATGACGA
GTCTTTTGACGACTACCTGGGGCGCATGCGAGGAGATGCGGAGTGGGGAG
GGCATCAAGAGCTTGTCGCCGCAAGCCAGCTTTACAAGGCCAACATGGTT
GTGCACCAGTTCAAGGCTCCTCGCTTTTTCATCCCTTTCGAGAAGGCAAG
ATTGACTTTCCACCTGAGCTATCACGGAGAACACCACTACAATAGCGTGA
GGGCGACAGGCGACGAAGGCGCAGGACCAGCGCGACCAATTACTCTTCAG
ACCCCTACGACGAAGAATGCCCCGCGCGCTGACGGCCAACATGGTTGTGC
ACCAGTTCAAGGCTCCTCGCTTTTTCATCCCTTTCGAGAAGGCAAGATTG
ACTTTCCACCTGAGCTATCACGGAGAACACCACTACAATAGCGTGAGGGC
GACAGGCGACGAAGGCGCAGGACCAGCGCGACCAATTACTCTTCAGACCC
CTACGACGAAGAATGCCCCGCGCGCTGACGGCAGTCCGTGGCCCGAGGAG
GAAGCAGCGGTGGCCCTAAGCTGCCCATGGGCCAGGCAGCCGGATGTATT
GGCAGCTTTAGAATCCACTGGAGGGAGAGGCGAGGACGCCATCGAGCTCC
TCATCGCCGCTCGGAACGAGCCCGGCCTAGAGGGAAAAGTGAACGGTGTT
GGCGATACAGCTGTAGAAACAGAGGGTACCGGGAAGGCTAACACTAACAG
CGGCGGCGATGGCTCCGTACTTGATACGTTGCTGCAGGGGAGCGGGGCAA
CAGACGAAGGCCGAGGACATAACGGGGCAGCAGGCCTTGCGACGGAGGGT
GGGAAAAAGAAGAAAGGCGACAAGGCCGCCAAGAAGGTCACCAGATCTGC
GGATTGCCCTTGCGGGAGCGGGGTAAAGTACAAGAAGTGCTGCCGGAAAA
AAGATGCCGCGATAGCCCGGGGACAAATTGCCCCTCCTGCTGAGCCAGAG
AGCACATCAGGAGATTCGTCGGTGGTGGATGATTTGGGGTCGTTAGTGAT
CTGAGCAGTCCGTGGCCCGAGGAGGAAGCAGCGGTGGCCCTAAGCTGCCC
ATGGGCCAGGCAGCCGGATGTATTGGCAGCTTTAGAATCCACTGGAGGGA
GAGGCGAGGACGCCATCGAGCTCCTCATCGCCGCTCGGAACGAGCCCGGC
CTAGAGGGAAAAGTGAACGGTGTTGGCGATACAGCTGTAGAAACAGAGGG
TACCGGGAAGGCTAACACTAACAGCGGCGGCGATGGCTCCGTACTTGATA
CGTTGCTGCAGGGGAGCGGGGCAACAGACGAAGGCCGAGGACATAACGGG
GCAGCAGGCCTTGCGACGGAGGGTGGGAAAAAGAAGAAAGGCGACAAGGC
CGCCAAGAAGGTCACCAGATCTGCGGATTGCCCTTGCGGGAGCGGGGTAA
AGTACAAGAAGTGCTGCCGGAAAAAAGATGCCGCGATAGCCCGGGGACAA
ATTGCCCCTCCTGCTGAGCCAGAGAGCACATCAGGAGATTCGTCGGTGGT
GGATGATTTGGGGTCGTTAGTGATCTGA
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