mRNA_L-elsbetiae_contig5804.14238.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: D7FGR1_ECTSI (OTU domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR1_ECTSI) HSP 1 Score: 373 bits (957), Expect = 2.520e-122 Identity = 199/289 (68.86%), Postives = 225/289 (77.85%), Query Frame = 2 Query: 185 QVMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRFFIPFEKARLTFHLSYHGEHHYNSVRATGDEGAGPARPITLQTPTTKNAPRADGSPWPEEEAAVALSCPWARQPDVLAALESTGGRGEDAIELLIAARNEPGLEGKVNGVGDTAVETEGTGKANTNSGGDGSVLDTLLQGSGATDEGRGHNGAAGLATEGGKKKKGDKAAKKVTRSADCPCGSGVKYKKCCRKKDAAIARGQIAPPAEPESTSGDSSVVDDLGSLVI 1051 +VM+H++ NR+ FEPYMEDDE+F DYL RMRG+AEWGG+QELVAASQLYK N+VVHQFKAPRFFIP EKAR T HLSYHGEHHYNSVRA GDE GPA PITLQTPT+K SPWPEEEAAVA SCPWA P+++AALE+TGGRG+DAIELLIAARNEPGLE GV +TA + +GTGK DG Q +G EG+G G G KK +KAAKKV R++DCPCGSG+KYKKCCRKKDAAIARGQI PAEP++ SGDSSVVDDLGSLVI Sbjct: 89 KVMDHLQRNREVFEPYMEDDETFGDYLERMRGEAEWGGNQELVAASQLYKTNVVVHQFKAPRFFIPCEKARRTIHLSYHGEHHYNSVRAIGDEANGPALPITLQTPTSKGGSHKRESPWPEEEAAVARSCPWASPPNIVAALETTGGRGDDAIELLIAARNEPGLE---EGVDNTAGDKKGTGKLE-----DGGDSGEKPQENGRPGEGKGRGG--------GVAKKSEKAAKKVARASDCPCGSGLKYKKCCRKKDAAIARGQIDAPAEPDA-SGDSSVVDDLGSLVI 360
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: A0A6V1PSA8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PSA8_HETAK) HSP 1 Score: 165 bits (418), Expect = 5.580e-42 Identity = 127/327 (38.84%), Postives = 160/327 (48.93%), Query Frame = 2 Query: 185 QVMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRFFIPFEKAR----LTFHLSYHGEHHYNSVRATGDEGAGPARPITLQ--TPTTKNAPRADGSPWP-------------EEEAAVALSCPWARQPDVLAALESTGGRGEDAIELLIAARNEPGLEGKVNGVGDTAVETEGTGKANTNSGGDGSVLDTL---------LQGSGATDEGRGHNGAAGLATEGGKKKKGDKAAKK--VTRSADCPCGSGVKYKKCCRKKDAAIARGQI--------APPAEPESTSGDSSVVDDLGSLVI 1051 ++M+HIE + D F +MEDDE F YL RMR D +WGGHQEL AASQL++ ++VHQ++APR I FE A HLSYHGE HYNSVRA GD G GP PI L+ P +K RA G P P E+ V LS PWA V A+ G G AIEL+++ E LE + ++E TG+ NT + SV+ + L D+ + A G + + K VTR A CPCGSG+KYKKCCRK+D R Q A G + D GSL I Sbjct: 98 RIMDHIEAHGDLFALFMEDDEPFAGYLSRMRADRQWGGHQELYAASQLFRTTILVHQYQAPRLEISFEGADGRRPHPLHLSYHGESHYNSVRAVGDPGGGPPLPINLRQSAPPSK---RAGGGPAPGGGEGKQQGPGTAEDWELVRLSVPWADGALVERAMARARGEGIQAIELIVSG--EVYLEEEDQSP--HTSQSESTGEGNTGADSKESVVHSSQASNQECNNLNPEEEGDQSSSTSKADVCENGGDESTLSGRTIKNNAVTRGAKCPCGSGLKYKKCCRKRDLLKKRIQSNSAECNDGAEEWNGHDVPGGDDSLQDFGSLAI 417
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: A0A7S2WN45_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WN45_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.410e-40 Identity = 118/318 (37.11%), Postives = 161/318 (50.63%), Query Frame = 2 Query: 173 PPLPQVMNHI----ETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRFFI----PFEKARLTFHLSYHGEHHYNSVRATGDEGAGPARPITLQTP---------TTKNAPRADGSPWPEEEAAVALSCPWARQPDVLAALESTGGRGEDAIELLIAA--RNEPGLEGKVNGVGDT--AVETEGTGKANTNSGGDGSVLDTLLQGSGATDEGRGHNGAAGLATEGGKKKKGDKAAKKVTRSADCPCGSGVKYKKCCRKKDAAIARGQIAPPAEPE----STSGDSSVVDDLGSLVI 1051 PPL + HI R+ FEP++EDDESFDDY+ RM D EWGGHQEL AA+Q Y N+V+HQ APR + P E A T HLSYHGE HYNSVRA D G GPA+ I + P T + + A+ E++ V +S PW + L G + A+ELL++ +P EG + V A+ G A +++G D+ + A D+G G A+G K G K+ K R+ CPCGSG KYKKCC K++ + AE + S++ ++S D GS + Sbjct: 6 PPLSPLWQHIVDFINAEREQFEPFIEDDESFDDYIQRMGSDGEWGGHQELYAATQAYNVNIVIHQLDAPRLELYASQP-EFATATLHLSYHGEFHYNSVRAADDFGPGPAQAIAMDRPPMPAAATGGTDRGSSSAENLSAVEKQ--VRISVPWVDLEVIRGTLREVNGDADAAVELLVSGFIPPDPAAEGDHDAVSQNPGAIGVVGGEVAASSAG----SADSSPE---AGDQGGGKLSASG--------KSGQKSGK-TARADLCPCGSGKKYKKCCMKQEKRAKAFRAKKEAEQQKAVASSNSNTSGSADGGSEAV 304
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: A0A7S2WLR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLR9_9STRA) HSP 1 Score: 156 bits (395), Expect = 9.150e-39 Identity = 114/309 (36.89%), Postives = 159/309 (51.46%), Query Frame = 2 Query: 188 VMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRFFI----PFEKARLTFHLSYHGEHHYNSVRATGDEGAGPARPITLQTP---------TTKNAPRADGSPWPEEEAAVALSCPWARQPDVLAALESTGGRGEDAIELLIAA--RNEPGLEGKVNGVGDT--AVETEGTGKANTNSGGDGSVLDTLLQGSGATDEGRGHNGAAGLATEGGKKKKGDKAAKKVTRSADCPCGSGVKYKKCCRKKDAAIARGQIAPPAEPE----STSGDSSVVDDLGSLVI 1051 +++ I R+ FEP++EDDESFDDY+ RM D EWGGHQEL AA+Q Y N+V+HQ APR + P E A T HLSYHGE HYNSVRA D G GPA+ I + P T + + A+ E++ V +S PW + L G + A+ELL++ +P EG + V A+ G A +++G D+ + A D+G G A+G K G K+ K R+ CPCGSG KYKKCC K++ + AE + S++ ++S D GS + Sbjct: 114 IVDFINAEREQFEPFIEDDESFDDYIQRMGSDGEWGGHQELYAATQAYNVNIVIHQLDAPRLELYASQP-EFATATLHLSYHGEFHYNSVRAADDFGPGPAQAIAMDRPPMPAAATGGTDRGSSSAENLSAVEKQ--VRISVPWVDLEVIRGTLREVNGDADAAVELLVSGFIPPDPAAEGDHDAVSQNPGAIGVVGGEVAASSAG----SADSSPE---AGDQGGGKLSASG--------KSGQKSGK-TARADLCPCGSGKKYKKCCMKQEKRAKAFRAKKEAEQQKAVASSNSNTSGSADGGSEAV 403
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: A0A7S1CP50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CP50_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.770e-24 Identity = 71/165 (43.03%), Postives = 95/165 (57.58%), Query Frame = 2 Query: 185 QVMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRFFIPFEK-ARLTFHLSYHGEHHYNSVRATGDEGAGPARPITL--QTPTTKNAPRADGSPWPEEEAAVALSCPWARQPDVLAALESTGGRGEDAIELLIAARNE 670 +VM+ IE +RD F+ ++EDDE F+DY+ R+R +AEWGGH EL AAS+ N+VVHQ PR+ + + R HLSYH HY SVR D G GPA PI + + APR D + ++E + S P V L + GG E AIE+LIA +E Sbjct: 165 EVMDFIEAHRDDFQWFIEDDEPFEDYVARLRTNAEWGGHLELQAASRQLGRNVVVHQLSMPRWELQNARDGRDALHLSYHDGEHYASVRMRSDPGDGPALPIVIGARHEVDAAAPRRDPADPSDDELLIMRSAPGKGLARVREVLGNMGGDVELAIEVLIAETDE 329
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: W7U4L0_9STRA (SEC-C motif-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4L0_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.630e-22 Identity = 86/262 (32.82%), Postives = 116/262 (44.27%), Query Frame = 2 Query: 188 VMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRFFIPFEKARLTFHLSYHGEHHYNSVRATGD--EGAGPARP------ITLQTPTTKNAPRADGSPWPEEEAAVALSCPWARQPDVLAALESTGGRGEDAIELLIAARNEPGLEGKVNGVGDTAVETEGTGKANTNSGGDGSVLDTLLQGSGATDEGRGHNGAAGLATEGGKKKKGDKAAKKVTRSADCPCGSGVKYKKCCRK 949 V++ IE + F P++EDDE F DY+ RMR + EWGG QE+ AAS+ + N+V+HQ PRF I F+ + T HLS+HG HYNS+RA D PA+P + L T T SP S P A + RG++ EL R E + D + E++G+ +D DE R ATE K + R CPC SG K++KCCRK Sbjct: 96 VIDFIEAHETDFAPFVEDDEKFSDYVHRMRNEGEWGGQQEICAASRCFHVNVVIHQLDCPRFEILFKASAPTIHLSFHGASHYNSIRAWDDPCRMGDPAKPFLALTALPLSTSKTSTLTSFSSSPSLAPHRREGKSIPGAEIKE----------RGDEDDELRRKTRKE---------MADISDESDGS-------------IDR--------DEPR--------ATE----------EKVLKRGGQCPCRSGKKWRKCCRK 299
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: A0A2K1L0W0_PHYPA (OTU domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L0W0_PHYPA) HSP 1 Score: 108 bits (271), Expect = 3.290e-22 Identity = 86/266 (32.33%), Postives = 124/266 (46.62%), Query Frame = 2 Query: 188 VMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRF----FIPFEKARLTFHLSYHGEHHYNSVRATGDEGAGPARPITLQ---TPTTKNAPRADGSPWPEEEAAVAL------SCPWARQPDVLAALESTGGRGEDAIELLIAARNEPGLEGKVNGVGDTAV-ETEGTGKANTNSGGDGSVLDTLLQGSGATDEGRGHNGAAGLATEGGKKKKGDKAAKKVTRSADCPCGSGVKYKKCC 943 V+N+++ +R+ FEP++ED+ FD+YL MR + W GH E+ A S + + N+ +HQ K PR+ FI + T HLSYH HYNSVR D G GPA+P ++ TP ++ P D + A S + V L G + AIE LIA E G + G + + TG N S D + L A++ GR N ++ +++ V R+ CPCGS KYK CC Sbjct: 68 VVNYLQEHREEFEPFVEDEVPFDEYLKTMREETTWAGHMEIQATSLVTRTNICIHQLKTPRWQIRNFITADTT--TIHLSYHDGEHYNSVRRQDDPGVGPAKPFIIEGDATPASQPPPVKDNIKDKSKVVEAATIKRIMGSSGCTNEKRVREILLDVHGDADTAIEYLIA---EAGGDASSTGSDENDPGSSAATGDQNRISVSDDAESARSLSSHTASESGRIGNASS-------------VSSQSVGRNKPCPCGSKKKYKSCC 315
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: A0A7I4DBQ9_PHYPA (OTU domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4DBQ9_PHYPA) HSP 1 Score: 98.6 bits (244), Expect = 1.910e-19 Identity = 50/121 (41.32%), Postives = 73/121 (60.33%), Query Frame = 2 Query: 188 VMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRF----FIPFEKARLTFHLSYHGEHHYNSVRATGDEGAGPARPITLQ---TPTTKNAPRAD 529 V+N+++ +R+ FEP++ED+ FD+YL MR + W GH E+ A S + + N+ +HQ K PR+ FI + T HLSYH HYNSVR D G GPA+P ++ TP ++ P D Sbjct: 68 VVNYLQEHREEFEPFVEDEVPFDEYLKTMREETTWAGHMEIQATSLVTRTNICIHQLKTPRWQIRNFITADTT--TIHLSYHDGEHYNSVRRQDDPGVGPAKPFIIEGDATPASQPPPVKD 186
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: A0A6B2L5Q9_9EUKA (OTU domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L5Q9_9EUKA) HSP 1 Score: 100 bits (250), Expect = 2.490e-19 Identity = 49/93 (52.69%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 188 VMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRFFIP-FEKARLTFHLSYHGEHHYNSVRATGDE 463 + N+IE NR+ FEP++EDDE F DYL RMR +A WGGH E+ A S Y N+ +HQ PR+ I F+ + T HLSYH HY+SVR GDE Sbjct: 88 ICNYIEKNREQFEPFIEDDEPFTDYLKRMRKNATWGGHLEIQACSLAYTVNITIHQLGQPRWDIKNFDDSVKTIHLSYHQGEHYSSVRKIGDE 180
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Match: A0A8J4F564_9CHLO (OTU domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F564_9CHLO) HSP 1 Score: 99.0 bits (245), Expect = 1.710e-18 Identity = 99/310 (31.94%), Postives = 136/310 (43.87%), Query Frame = 2 Query: 185 QVMNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANMVVHQFKAPRFFI---PFEKARLTFHLSYHGEHHYNSVRATGDEGAGPARPITLQ---TPTTKNAPR---ADGSPWPE-EEAAVALSCPWARQPDVLAALESTGGRGEDAIELLIAAR----NEPGLEGKVNGVGDTAV-------ETEG----TGKANTNSGGDGSVLDTLLQGSGATDEGRG-------HNGAAGLATEGGKKKK------------------GDKAAKKVTRSAD-------CPCGSGVKYKKCC 943 +V++++ +++ F P++EDDESFD Y+ RM+ D W G+ E+VAAS+ +AN+ ++Q PR+ + P + A + HLSYH HYNSVR D G G PI ++ T + PR DG+ W E +E VA S V ALE G E AIE +I A +E G D AV T G T + G S+ + SG T +G H+ A G A G AA+K +A CPCGS KYK CC Sbjct: 95 RVVSYMVEHQEDFTPFVEDDESFDSYIARMKKDGVWAGYMEVVAASRCLQANLTIYQAGQPRWRVVHHPEDSAPM-LHLSYHDGQHYNSVRCADDFGTGSPAPIVIRGDGTLAARPPPRQKAGDGN-WDEKDERRVASSTACTDMALVCKALEEARGDVEAAIERVIEALAAEPSEAAEPGATVSTADPAVVPTPPPPSTTGIAGSTDPPSEQGNGSQSMGSNDIPASGTTSQGLAAVPASVQHDNAGGAAPSAASPPSPSGVVGKGIRVTSTRVTAGKVAARKAVGTAGGPSNNKPCPCGSHKKYKACC 402 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5804.14238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5804.14238.1 >prot_L-elsbetiae_contig5804.14238.1 ID=prot_L-elsbetiae_contig5804.14238.1|Name=mRNA_L-elsbetiae_contig5804.14238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=288bp MNHIETNRDAFEPYMEDDESFDDYLGRMRGDAEWGGHQELVAASQLYKANback to top mRNA from alignment at L-elsbetiae_contig5804:1428..5241+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5804.14238.1 ID=mRNA_L-elsbetiae_contig5804.14238.1|Name=mRNA_L-elsbetiae_contig5804.14238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3814bp|location=Sequence derived from alignment at L-elsbetiae_contig5804:1428..5241+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5804:1428..5241+ >mRNA_L-elsbetiae_contig5804.14238.1 ID=mRNA_L-elsbetiae_contig5804.14238.1|Name=mRNA_L-elsbetiae_contig5804.14238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1728bp|location=Sequence derived from alignment at L-elsbetiae_contig5804:1428..5241+ (Laminarionema elsbetiae ELsaHSoW15)back to top |