mRNA_L-elsbetiae_contig5747.14145.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5747.14145.1 vs. uniprot
Match: D7G0Q5_ECTSI (Hypothetical leucine rich repeat calcium binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Q5_ECTSI) HSP 1 Score: 180 bits (456), Expect = 3.020e-49 Identity = 84/115 (73.04%), Postives = 96/115 (83.48%), Query Frame = 1 Query: 166 QNSSIRNIDLSNNSLGRIGVGCVMALPAEVGDRIEIRLDHCNFMVGCESCWFDDDQLWPSYDLRMDQPYDRAVAFHLIRRAARDEGLKLKRVGHIMAGESEKQINLVVGSGQSRR 510 QNS R+IDLSNN LG++GVGCVM LPAEVGDRI L CNFMV CE CWFDD+Q+ PSY LRMD+PYDRAVAFHL+RRAARDEGLKLK V H MAGE+EK+I+LV G+G + R Sbjct: 754 QNSVTRDIDLSNNPLGKVGVGCVMELPAEVGDRINTELASCNFMVDCEECWFDDEQIRPSYHLRMDEPYDRAVAFHLVRRAARDEGLKLKMVAHTMAGEAEKEIHLVTGTGMTSR 868
BLAST of mRNA_L-elsbetiae_contig5747.14145.1 vs. uniprot
Match: A0A482ST86_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482ST86_9ARCH) HSP 1 Score: 105 bits (263), Expect = 2.620e-23 Identity = 51/163 (31.29%), Postives = 91/163 (55.83%), Query Frame = 1 Query: 19 LDLSFNCFGEKGGEALGASLNVNTSLETLGLASNAINPRACFVICQGLMQNSSIRNIDLSNNSLGRIGVGCVMALPAEVGDRIEIRLDHCNFMVGCESCWFDDDQLWPSYDLRMDQPYDRAVAFHLIRRAARDEGLKLKRVGHIMAGESEKQINLVVGSGQSR 507 LDL+ N G + GE LG ++ N +L TL ++ N + AC IC G++QN ++ ++++ N +G +GV +M + +G R+ ++ +CN +V CW++ SY L++D+P+DRAVAFHL+ A + + + + + + LV G + R Sbjct: 536 LDLNNNGLGYQAGELLGDAIMENRTLRTLLVSGNNLTTTACICICIGIVQNFALNRVEMNENPIGEVGVRMIMQVSMSLGSRVSLQAKNCNTIVTDGRCWYNPSNPCRSYSLKLDRPFDRAVAFHLLHIVATHNSYIFQTSTYELEKGNPQPLKLVQGIAKDR 698
BLAST of mRNA_L-elsbetiae_contig5747.14145.1 vs. uniprot
Match: A0A7S3H921_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H921_9STRA) HSP 1 Score: 102 bits (253), Expect = 5.710e-22 Identity = 54/166 (32.53%), Postives = 88/166 (53.01%), Query Frame = 1 Query: 10 LKELDLSFNCFGEKGGEALGASLNVNTSLETLGLASNAINPRACFVICQGLMQNSSIRNIDLSNNSLGRIGVGCVMALPAEVGDRIEIRLDHCNFMVGCESCWFDDDQLWPSYDLRMDQPYDRAVAFHLIRRAARDEGLKLKRVGHIMAGESEKQINLVVGSGQSR 507 L LDLS N G GEALG ++ N +L+TL +A N AC +C G+++N +++ ++L +N +G G +M VG R+ + +CN E+CW+D Q Y+L++D P+ RAVAFHL++ A L + + +++LV + R Sbjct: 770 LTHLDLSCNGMGSAAGEALGDAIMENRTLKTLLVAGNNFTSTACLSMCVGVVENLAMKYLNLDDNPIGEAGAKMIMQSSIVVGSRVNLSAANCNTNQQDENCWYDPGQPCRDYELQLDHPFHRAVAFHLMQIVATHSTLIFSEMTYEPPNGKPAKLSLVQSVSKDR 935
BLAST of mRNA_L-elsbetiae_contig5747.14145.1 vs. uniprot
Match: A0A7S4D9J0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9J0_HETAK) HSP 1 Score: 75.9 bits (185), Expect = 1.800e-14 Identity = 45/140 (32.14%), Postives = 77/140 (55.00%), Query Frame = 1 Query: 40 FGEKGGEALGASLNVNTSLETLGLASNAINPRACFVICQGLMQNSSIRNIDLSNNSLGRIGVGCVMALPAEVGDRIEIRLDHCNFMV-GCESCWFDDDQLWPSYDLR---------MDQPYDRAVAFHLIRRAARDEGLK 429 FG++GG A+G +L N SL +L LA+N+++PRA F+I L NS+I I L N +G++G +M+LPA + +++ L C + G CW++ + P+ R + Y+ AV + ++ ++ GLK Sbjct: 1 FGKEGGAAIGRALFDNKSLRSLNLANNSLDPRAAFIIAVALRYNSTIEEIILDGNPVGKVGGYSLMSLPATLERPLKLGLQGCTLSLPGGPRCWYNPED--PAERARGAGGLLALDLADEYNYAVLYEILWAMVKEPGLK 138
BLAST of mRNA_L-elsbetiae_contig5747.14145.1 vs. uniprot
Match: A0A7S0K1S5_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K1S5_CAFRO) HSP 1 Score: 61.2 bits (147), Expect = 1.150e-8 Identity = 47/146 (32.19%), Postives = 70/146 (47.95%), Query Frame = 1 Query: 61 ALGASLNVNTSLETLGLASNAINPRACFVICQGLMQNSSIRNIDLSNNSLGRIGVGCVMALPAEVGDRIEIRLDHCNFMVGCESCWFDDDQLWPSYD-----LRMDQPYDRAVAFHLIRRAARDEGLKLKRVGHIMAGESEKQINL 483 A+ A++ N +LE L LA N+I P A V+ L NS++ ID+S N+LG++G + E +EI L N V F D PS L + PY AVAF L+R ++ ++L+ V + + K I L Sbjct: 3 AMAAAVADNVTLEDLNLAHNSIMPNAALVLATCLATNSTLVRIDVSGNTLGKLGGRAFIRTGIE-SRHMEIGLAQTNLEVDD----FSDSAFHPSRPSGTRTLDLSDPYSHAVAFELLRIFRDNQAVQLEPVALAVPHSASKTITL 143
BLAST of mRNA_L-elsbetiae_contig5747.14145.1 vs. uniprot
Match: UPI0011B4B49A (NACHT, LRR and PYD domains-containing protein 12-like n=1 Tax=Gadus morhua TaxID=8049 RepID=UPI0011B4B49A) HSP 1 Score: 55.8 bits (133), Expect = 6.020e-6 Identity = 38/104 (36.54%), Postives = 55/104 (52.88%), Query Frame = 1 Query: 1 AADLKELDLSFNCFGEKGGEALGASL-NVNTSLETLGLASNAINPRACFVICQGLMQNSSIRNIDLSNNSLGRIGVGCVMALPAEVGDRIE-IRLDHCNFMVGC 306 ++ L+ELDLS N G G L A L + + +LETL L ++ + C + GL NSS+R +DLSNN L GV + A +E +RL+ C+ C Sbjct: 633 SSSLRELDLSNNDLGNSGVMLLSAGLGSPHCTLETLRLNCCMLSEKCCDALASGLSSNSSLRELDLSNNDLQNSGVKLLSAGLGSPHCTLETLRLNGCHLSEIC 736
BLAST of mRNA_L-elsbetiae_contig5747.14145.1 vs. uniprot
Match: UPI00074011C9 (ribonuclease inhibitor-like n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=UPI00074011C9) HSP 1 Score: 54.3 bits (129), Expect = 6.290e-6 Identity = 36/104 (34.62%), Postives = 55/104 (52.88%), Query Frame = 1 Query: 4 ADLKELDLSFNCFGEKGGEALGASL-NVNTSLETLGLASNAINPRACFVICQGLM-QNSSIRNIDLSNNSLGRIGVGCVMALPAEVGDRIE-IRLDHCNFMVGC 306 + L+ELDL N G+ G + L A+L + N L TLG+ + R C + L Q+SS+R +DLS+NSLG GV + A ++ +R++ C C Sbjct: 23 SSLRELDLGCNNLGDSGVKLLSAALRDPNCKLTTLGMKWCELTKRCCEDLASALQSQHSSLREVDLSDNSLGDSGVKLLSAALTNPNCKLTALRMESCKLTERC 126
BLAST of mRNA_L-elsbetiae_contig5747.14145.1 vs. uniprot
Match: A0A8C5BVN8_GADMO (Uncharacterized protein n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5BVN8_GADMO) HSP 1 Score: 54.7 bits (130), Expect = 1.370e-5 Identity = 33/81 (40.74%), Postives = 46/81 (56.79%), Query Frame = 1 Query: 1 AADLKELDLSFNCFGEKGGEALGASL-NVNTSLETLGLASNAINPRACFVICQGLMQNSSIRNIDLSNNSLGRIGVGCVMA 240 ++ L+ELDLS N G G L A L + + +LETL L ++ + C + GL NSS+R +DLSNN L GV + A Sbjct: 385 SSSLRELDLSNNDLGNSGVMLLSAGLGSPHCTLETLRLNCCMLSEKCCDALASGLSSNSSLRELDLSNNDLQNSGVKLLSA 465
BLAST of mRNA_L-elsbetiae_contig5747.14145.1 vs. uniprot
Match: A0A8C5FB53_GADMO (NACHT domain-containing protein n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5FB53_GADMO) HSP 1 Score: 54.7 bits (130), Expect = 1.430e-5 Identity = 33/81 (40.74%), Postives = 46/81 (56.79%), Query Frame = 1 Query: 1 AADLKELDLSFNCFGEKGGEALGASL-NVNTSLETLGLASNAINPRACFVICQGLMQNSSIRNIDLSNNSLGRIGVGCVMA 240 ++ L+ELDLS N G G L A L + + +LETL L ++ + C + GL NSS+R +DLSNN L GV + A Sbjct: 520 SSSLRELDLSNNDLGNSGVMLLSAGLGSPHCTLETLRLNCCMLSEKCCDALASGLSSNSSLRELDLSNNDLQNSGVKLLSA 600
BLAST of mRNA_L-elsbetiae_contig5747.14145.1 vs. uniprot
Match: A0A8C4ZW11_GADMO (NACHT domain-containing protein n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4ZW11_GADMO) HSP 1 Score: 54.7 bits (130), Expect = 1.450e-5 Identity = 33/81 (40.74%), Postives = 46/81 (56.79%), Query Frame = 1 Query: 1 AADLKELDLSFNCFGEKGGEALGASL-NVNTSLETLGLASNAINPRACFVICQGLMQNSSIRNIDLSNNSLGRIGVGCVMA 240 ++ L+ELDLS N G G L A L + + +LETL L ++ + C + GL NSS+R +DLSNN L GV + A Sbjct: 618 SSSLRELDLSNNDLGNSGVMLLSAGLGSPHCTLETLRLNCCMLSEKCCDALASGLSSNSSLRELDLSNNDLQNSGVKLLSA 698 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5747.14145.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5747.14145.1 >prot_L-elsbetiae_contig5747.14145.1 ID=prot_L-elsbetiae_contig5747.14145.1|Name=mRNA_L-elsbetiae_contig5747.14145.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=171bp AADLKELDLSFNCFGEKGGEALGASLNVNTSLETLGLASNAINPRACFVIback to top mRNA from alignment at L-elsbetiae_contig5747:7553..11640- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5747.14145.1 ID=mRNA_L-elsbetiae_contig5747.14145.1|Name=mRNA_L-elsbetiae_contig5747.14145.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4088bp|location=Sequence derived from alignment at L-elsbetiae_contig5747:7553..11640- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5747:7553..11640- >mRNA_L-elsbetiae_contig5747.14145.1 ID=mRNA_L-elsbetiae_contig5747.14145.1|Name=mRNA_L-elsbetiae_contig5747.14145.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1026bp|location=Sequence derived from alignment at L-elsbetiae_contig5747:7553..11640- (Laminarionema elsbetiae ELsaHSoW15)back to top |