mRNA_L-elsbetiae_contig5679.14039.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5679.14039.1
Unique NamemRNA_L-elsbetiae_contig5679.14039.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: D7G7W1_ECTSI (CMP/dCMP-type deaminase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7W1_ECTSI)

HSP 1 Score: 392 bits (1006), Expect = 1.100e-133
Identity = 211/299 (70.57%), Postives = 235/299 (78.60%), Query Frame = 1
Query:    1 MLEVLQEDDEFDLAGSARMEVLISVIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVILSPPDMYHSLDETKRKDIEERYRLSPTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEEARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRG--RGRVVATASRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSA--------RPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQYLCTGFDLYITREPCLM 867
            MLEV+QED EFDLAGSAR++VL+S I+PRQASQ+VK+LS LLP E AKL HLKRIRSSQ P  G++LQV+LSPPDMYH+LDE KRK+I ERY L PTV AVPKLEPRTR QF SGG+ WPMIFHHSTSEEARRAAR IP+QDALDA+ FM+DAL DA TGRQQNGGR TVGAVLVDP  G G  RGRVVATASRERQ+V DE PASMRDHPLHHA MLCVQGVGRAL+A        R Q  D    K      GK +E+  ++        G VEVLS +QYLCTGFDLY+TREPCLM
Sbjct:    1 MLEVVQEDHEFDLAGSARLDVLVSAIKPRQASQVVKDLSELLPLERAKLNHLKRIRSSQHPETGRLLQVLLSPPDMYHALDEAKRKEIVERYGLEPTVHAVPKLEPRTRAQFLSGGSAWPMIFHHSTSEEARRAARVIPEQDALDAIGFMRDALVDAETGRQQNGGRPTVGAVLVDPLGGCGGRRGRVVATASRERQKVRDEEPASMRDHPLHHAVMLCVQGVGRALAAGSRQEKVARKQEEDSAGGKLGKEREGKGSESLCSDADPPG---GVVEVLSPEQYLCTGFDLYVTREPCLM 296          
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: A0A7S2KKU2_BIGNA (Hypothetical protein n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A7S2KKU2_BIGNA)

HSP 1 Score: 115 bits (288), Expect = 2.980e-26
Identity = 83/274 (30.29%), Postives = 130/274 (47.45%), Query Frame = 1
Query:   70 SVIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVI-----LSPPDMYHSLDETKRKDIEERYRLSPTV--CAVPKLEPRTREQFKSGGAVWPMIFHHSTSEEARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATA-SRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQYLCTGFDLYITREPCLM 867
            ++IEPR AS ++K++S +LP    +  HLKRIR                   L P D ++ LD   R +++   +L+PT     VP   P T E++++ G  WP+      +++     +   + +    ++ M++A+     G  +NGG+  +G V+VDP       RVVA A  R R+R       +   HPLHHA M C+  V     A+             PP  +R         +  +G G  + LSSK YLCTG+D+Y+T EPC+M
Sbjct:   44 AIIEPRSASTLLKKVSEVLPIPNFR--HLKRIRKKTTAXXXXXXXXXXXXXXLCPEDDFNLLDGDLRSELQ---KLTPTQESVRVPSHPPETDEEYRAYGKHWPISSRPRPAQK-----KEFSEDEKKIMISHMREAISVGRLGASKNGGQLPIGCVIVDPK----SNRVVAKAYDRRRRRTEITSGEASCGHPLHHATMNCISAVAEYDRAK------------WPPNEQRK-------RRRDDGSGVEDALSSKPYLCTGYDMYVTHEPCVM 284          
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: D8QYM6_SELML (CMP/dCMP-type deaminase domain-containing protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QYM6_SELML)

HSP 1 Score: 107 bits (266), Expect = 2.930e-23
Identity = 87/289 (30.10%), Postives = 141/289 (48.79%), Query Frame = 1
Query:   34 DLAGSARMEVLISVIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVILSPPDMYHSLDETKRKDIEERYRLSPTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEEARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATASRERQRVHDEWPASMRD--------HPLHHAAMLCVQGVG---RALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQYLCTGFDLYITREPCLM 867
            ++  SA ++V  + I+ + AS ++KELS + P  +  L+H+KRIRS +D      L +IL       S   ++  ++ E++ L   +  +PK     RE++ +   +WP  FH ++   AR +     + +      FM  A+  AS       GR + GAV+VDP++G    +V+A+         +  P S  D        HPL HAAM+ ++      R L    +  DE      +  + +R EA AAE         ++ V +S+ YLCTGFD+Y+TREPC M
Sbjct:   16 EVDSSATVDVFAAHIQGKLASVLIKELSVVFPLTD--LSHIKRIRSKRDTEGP--LSIILCTRTDDSSTIPSQVAELVEKHSLETFIAKIPKHPAADREEWATQCNLWPTTFHPNS---ARPSKIQFNEDEERTIAAFMVRAMHQASLAIDH--GRLSNGAVIVDPSIG----QVIASG------YDESTPPSCTDCSSCSGGWHPLRHAAMVAIEQASERDRRLFPDDKECDEAT----LSVKRQRCEASAAESIHIESRSSSITVEASRPYLCTGFDIYLTREPCAM 281          
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: A0A673AU73_9TELE (Adenosine deaminase tRNA specific 3 n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673AU73_9TELE)

HSP 1 Score: 105 bits (263), Expect = 9.490e-23
Identity = 81/271 (29.89%), Postives = 120/271 (44.28%), Query Frame = 1
Query:   73 VIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVILSPPDMYH------SLDETKRKDIEERYRLSPTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEEARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATASRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQYLCTGFDLYITREPCLM 867
            +++ ++ S++V+EL+GL P     L H+KR+R+ ++ G    L+V++      H      S+D     D        P V  VP   P TR QF+     WP+ FH                        +M  AL  A  GR+  GG   VGAV VDPA+     R++A +       HD        HPLHHA M+C+  V R+        D+  +     P     E        ++EG+ A +      Y+CTG+DLY+TREPC+M
Sbjct:   42 IVDKKETSRLVRELNGLYPM--ITLQHIKRVRACKEEGSPHPLEVLVCLVSDAHGQEKMVSIDSLLPSDFRRDGLGEPFVVKVPARPPLTRPQFEIASKHWPLAFHEDKQVTVALKGELFSPLQKAKMHMYMTTALTAAKAGRE--GGMEAVGAVAVDPAMD----RIIAVS-------HD----CRGKHPLHHAVMVCIDLVARSQGGGCYSYDQYPACHFSSPSSNPFE-------NTSEGEPAFQ-----PYICTGYDLYVTREPCVM 281          
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: A0A3B4ZGP3_9TELE (Adenosine deaminase tRNA specific 3 n=1 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B4ZGP3_9TELE)

HSP 1 Score: 104 bits (260), Expect = 2.410e-22
Identity = 84/270 (31.11%), Postives = 122/270 (45.19%), Query Frame = 1
Query:   73 VIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVIL----SPPDMYHSLDETKRKDIEERYRLSPTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEE-ARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATASRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQYLCTGFDLYITREPCLM 867
            ++  ++ SQ+V+EL+ L P     L H+KR+R+ ++ G    L+V++      PDM     ++    ++      P V  VP   P TR QF+     WP  FH       A R     P Q A+  + +M  A+  A  GR+   G   VGAV+VDPA+     R+VA         HD       DHPLHHA M+C+  V R+        D   +    PP     +             G      S+ Y+CTG+DLY+TREPC+M
Sbjct:   42 IVNKKETSQLVRELNSLYPLNG--LQHIKRVRARKEKGSPHPLEVLVCLVSDAPDMKVVSVDSLLPGVKPDGLGEPFVVKVPARAPLTRPQFELASQHWPTSFHEDKQVTVALRGELFSPPQKAVMHM-YMMSAVTAAKAGREL--GMEAVGAVVVDPAME----RIVAVG-------HD----CRGDHPLHHAVMVCIDLVARSQGGGCYCFDSYPACQFTPPTSNMFQ------------NGPDLEAGSQPYICTGYDLYVTREPCVM 279          
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: ADAT3_HUMAN (Probable inactive tRNA-specific adenosine deaminase-like protein 3 n=39 Tax=Simiiformes TaxID=314293 RepID=ADAT3_HUMAN)

HSP 1 Score: 104 bits (260), Expect = 2.590e-22
Identity = 95/273 (34.80%), Postives = 125/273 (45.79%), Query Frame = 1
Query:   73 VIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVIL---SPPDMYHSLDET-KRKDIEERYRLSPTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEEARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATASRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQ----YLCTGFDLYITREPCLM 867
            V++ RQ S+++KE+S L P       HLKR+R S+D G    L+++L    P     SL E   R  ++ R    P +  VP   P TR QF+   A WP  FH      +  A R    Q+     + M+ A+  A   R    G   VGAV+VDPA      RV+AT        HD    S  D+PL HA M+CV  V R          +G       P    + A AA     A   GAV  L + +    YLCTG+DLY+TREPC M
Sbjct:   50 VLDKRQTSRLLKEVSALHPLPAQ--PHLKRVRPSRDAGSPHALEMLLCLAGPASGPRSLAELLPRPAVDPRGLGQPFLVPVPARPPLTRGQFEEARAHWPTSFHEDKQVTSALAGRLFSTQERAAMQSHMERAVWAAR--RAAARGLRAVGAVVVDPA----SDRVLATG-------HD---CSCADNPLLHAVMVCVDLVARG---------QGRGTYDFRPFPACSFAPAAA--PQAVRAGAVRKLDADEDGLPYLCTGYDLYVTREPCAM 293          
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: UPI00201551A8 (probable inactive tRNA-specific adenosine deaminase-like protein 3 n=2 Tax=Alosa TaxID=34772 RepID=UPI00201551A8)

HSP 1 Score: 104 bits (260), Expect = 2.810e-22
Identity = 79/275 (28.73%), Postives = 128/275 (46.55%), Query Frame = 1
Query:   73 VIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVIL-----SPPDMYHSLDETKRKDI-EERYRLS----PTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEEARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATASRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQYLCTGFDLYITREPCLM 867
            +I+ +  S+++K L+   P  +  L H+KR+R+ +       L+VI+     +PPD+ +S + +    +  E +  S    P +  +P   P TR QF+   A WP  FH      A    +            +M  A++ A  G+++  G   VGAV+VDPA      +++ATA       HD    +   HPLHHA M+C+  V           D   +     P G+  E +A++        G+V     + Y+CTG+DLY+TREPC+M
Sbjct:   43 IIDKKATSRLIKNLTTTYPLSD--LQHIKRVRACKSDKHPHPLEVIVCLVDDAPPDVKNSKEGSLASLLFSESFDSSGLGEPFIVKIPSSAPLTRPQFERASAHWPTSFHEDKQITAALRGQLFTAAQKAKMHKYMMAAIRAAKAGQER--GMVPVGAVMVDPA----SDQILATA-------HD---CTRGSHPLHHAVMVCIDLVAHGQGGGAHNFDPFPACQFTVPDGQLGE-DASDSVAQGPADGSVPEQRGQPYICTGYDLYVTREPCVM 298          
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: A0A484CW83_PERFV (CMP/dCMP-type deaminase domain-containing protein n=7 Tax=Percidae TaxID=8165 RepID=A0A484CW83_PERFV)

HSP 1 Score: 102 bits (254), Expect = 1.810e-21
Identity = 87/272 (31.99%), Postives = 126/272 (46.32%), Query Frame = 1
Query:   73 VIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVIL-----SPPDMYHSLDETKRKDIEERYRLS-PTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEE-ARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATASRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQYLCTGFDLYITREPCLM 867
            ++  ++ S++++ELS L P     L H+KR+R+ ++ G    L+V++     +P     ++D     D   R  L  P V  VP   P TR QF+     WP  FH       A R     P Q A   + +M  AL  A  G++   G   VGAV+VDPA      R+VA         HD       DHPLHHAAM+C+  V ++        D   +     P         ++  +SA G  A    S + Y+CTG+DLY+TREPC+M
Sbjct:   42 IVNKKETSRLLRELSTLYPLNG--LQHIKRVRAVREKGSPHPLEVLVCLVSDAPDTKVINIDSLLPSDGVRRDGLGEPFVVKVPARPPLTRPQFELASKHWPTSFHEDKQVTVALRGELFSPPQKARMHM-YMTSALTAAQAGKEL--GMEAVGAVVVDPATE----RIVAVG-------HD----CRGDHPLHHAAMVCIDLVAQSQGGGRYSFDRYPACGFTSP--------TSDPFQSAPGSEA----SPQPYICTGYDLYVTREPCVM 281          
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: UPI00148F45B5 (probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1 n=2 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148F45B5)

HSP 1 Score: 102 bits (254), Expect = 1.960e-21
Identity = 87/275 (31.64%), Postives = 125/275 (45.45%), Query Frame = 1
Query:   73 VIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVIL----SPPDMY-----HSLDETKRKDIEERYRLSPTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEE-ARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATASRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQYLCTGFDLYITREPCLM 867
            ++  R+ S++V+EL+ L P  +  L H+KR+R+ ++      L+V+L      PDM        L   K + + E     P V  VP   P TR QF+     WP  FH       A R     P Q  L   T+M  A+  A  G +   G   VGAV+VDP     + +V+A         HD       DHPLHHA M+C+  V R+        D   +    PP  + T +       S + +G     SS+ Y+CTG+D Y+TREPC+M
Sbjct:   51 IVNKRETSRLVRELNSLCPLSD--LQHVKRVRAVKEKSSPHPLEVLLCLVSDAPDMKVVNIKSLLPSGKCEGLGE-----PFVVKVPARPPLTRPQFELSSKHWPTSFHEDKQVTVALRGELFGPAQKTL-MHTYMMSAVTTARAGHRM--GMEAVGAVVVDPV----KEKVIAVG-------HD----CRGDHPLHHAVMVCIDLVARSQGGGCYSFDRYAACSFTPPAPETTPS-------SPDSEG-----SSQPYICTGYDFYVTREPCVM 288          
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: A0A7J8I3R9_MOLMO (Adenosine deaminase tRNA specific 3 n=2 Tax=Molossus molossus TaxID=27622 RepID=A0A7J8I3R9_MOLMO)

HSP 1 Score: 101 bits (252), Expect = 3.630e-21
Identity = 87/273 (31.87%), Postives = 130/273 (47.62%), Query Frame = 1
Query:   73 VIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVIL---SPPDMYHSLDET-KRKDIEERYRLSPTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEEARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATASRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQ----YLCTGFDLYITREPCLM 867
            +++ RQ S+++KE+S + P  +   THLKR+R S+D  R  +L+++L    P     SL E   +  ++ R    P +  VP   P TR QF+   A WP  FH         A R    Q+ ++    M+ A+  A   +   GG   VGAV+VDPA     G+V+A         HD    S   +PL HA M+C+      L A+ Q     + +PH  P      A   +G ++   +   E +   +    Y+CTG+DLYITREPC M
Sbjct:   50 ILDKRQTSRLLKEVSAVHPLPDQ--THLKRVRPSRDASRPHLLEILLCLAEPAAGKRSLAELLPQPAVDPRGLGQPFLVPVPAWPPLTRGQFEEARAHWPTSFHEDKHVTRALAGRLFSAQEQVEMQGHMERAVWMAQ--QAATGGLRAVGAVVVDPA----SGQVLAMG-------HD---CSSSANPLLHATMVCID-----LVAQGQGQGTYDFRPH--PACSFAPASTHQGIQAVSVRTLNEDMDMDEDGLPYVCTGYDLYITREPCAM 297          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7W1_ECTSI1.100e-13370.57CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A7S2KKU2_BIGNA2.980e-2630.29Hypothetical protein n=1 Tax=Bigelowiella natans T... [more]
D8QYM6_SELML2.930e-2330.10CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A673AU73_9TELE9.490e-2329.89Adenosine deaminase tRNA specific 3 n=1 Tax=Sphaer... [more]
A0A3B4ZGP3_9TELE2.410e-2231.11Adenosine deaminase tRNA specific 3 n=1 Tax=Stegas... [more]
ADAT3_HUMAN2.590e-2234.80Probable inactive tRNA-specific adenosine deaminas... [more]
UPI00201551A82.810e-2228.73probable inactive tRNA-specific adenosine deaminas... [more]
A0A484CW83_PERFV1.810e-2131.99CMP/dCMP-type deaminase domain-containing protein ... [more]
UPI00148F45B51.960e-2131.64probable inactive tRNA-specific adenosine deaminas... [more]
A0A7J8I3R9_MOLMO3.630e-2131.87Adenosine deaminase tRNA specific 3 n=2 Tax=Moloss... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5679contigL-elsbetiae_contig5679:904..2642 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score397.9
Seed ortholog evalue4.1e-108
Seed eggNOG ortholog2880.D7G7W1
Preferred nameADAT3
KEGG koko:K07117,ko:K15442
Hectar predicted targeting categoryother localisation
GOsGO:0002097,GO:0002100,GO:0003674,GO:0003824,GO:0004000,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008251,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0052717,GO:0052718,GO:0070013,GO:0071704,GO:0090304,GO:1901360,GO:1902494
EggNOG free text desc.RNA modification
EggNOG OGsCOG0590@1,KOG2771@2759
COG Functional cat.FJ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03016
Exons4
Model size870
Cds size870
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5679.14039.1prot_L-elsbetiae_contig5679.14039.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5679 904..2642 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816604.8544433-CDS-L-elsbetiae_contig5679:903..13961622816604.8544433-CDS-L-elsbetiae_contig5679:903..1396Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5679 904..1396 -
1691683679.1748435-CDS-L-elsbetiae_contig5679:903..13961691683679.1748435-CDS-L-elsbetiae_contig5679:903..1396Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5679 904..1396 -
1622816604.8648887-CDS-L-elsbetiae_contig5679:1656..18891622816604.8648887-CDS-L-elsbetiae_contig5679:1656..1889Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5679 1657..1889 -
1691683679.185905-CDS-L-elsbetiae_contig5679:1656..18891691683679.185905-CDS-L-elsbetiae_contig5679:1656..1889Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5679 1657..1889 -
1622816604.8750813-CDS-L-elsbetiae_contig5679:2276..23901622816604.8750813-CDS-L-elsbetiae_contig5679:2276..2390Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5679 2277..2390 -
1691683679.1949265-CDS-L-elsbetiae_contig5679:2276..23901691683679.1949265-CDS-L-elsbetiae_contig5679:2276..2390Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5679 2277..2390 -
1622816604.884812-CDS-L-elsbetiae_contig5679:2612..26421622816604.884812-CDS-L-elsbetiae_contig5679:2612..2642Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5679 2613..2642 -
1691683679.2057784-CDS-L-elsbetiae_contig5679:2612..26421691683679.2057784-CDS-L-elsbetiae_contig5679:2612..2642Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5679 2613..2642 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5679.14039.1

>prot_L-elsbetiae_contig5679.14039.1 ID=prot_L-elsbetiae_contig5679.14039.1|Name=mRNA_L-elsbetiae_contig5679.14039.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=290bp
MLEVLQEDDEFDLAGSARMEVLISVIEPRQASQIVKELSGLLPFEEAKLT
HLKRIRSSQDPGRGKVLQVILSPPDMYHSLDETKRKDIEERYRLSPTVCA
VPKLEPRTREQFKSGGAVWPMIFHHSTSEEARRAARAIPDQDALDAVTFM
KDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATASRERQRVHDE
WPASMRDHPLHHAAMLCVQGVGRALSARPQVGDEGESKPHVPPRGKRTEA
EAAEGHKSAEGKGAVEVLSSKQYLCTGFDLYITREPCLM*
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mRNA from alignment at L-elsbetiae_contig5679:904..2642-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5679.14039.1 ID=mRNA_L-elsbetiae_contig5679.14039.1|Name=mRNA_L-elsbetiae_contig5679.14039.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1739bp|location=Sequence derived from alignment at L-elsbetiae_contig5679:904..2642- (Laminarionema elsbetiae ELsaHSoW15)
ATGTTGGAGGTACTTCAGGAAGATGATGAGGTATGCGCCACAATCTCTGC CTCTCTGTCTCTCTTCATCTCTGTCTCCGTCTCTGCTGTCTCGCTATCGT TTTTCATGCGCGGGACTGTGAGTTCACGTTTCCAACGGCAGATGAATCGT GTGACTCGTGTATGTACAATGTACAATAAGCTGACCGCCATGTGCGACGG CGTTTCCCAATTATCTCGTCTTGTTCATTCGTTCCTCCATTCTTGTGCCC AGTTTGACCTGGCAGGATCAGCCAGAATGGAGGTGTTGATTTCAGTTATC GAGCCTCGCCAGGCGAGCCAGATTGTGAAAGAATTATCAGGGCTGCTCCC CTTTGAGGAGGCCAAGGTCAGTGGACCAACACCAACACTCACGACCCTGA TTCCCAACGTGTGAAACTATTGTGGCGCATGGACTACGTTGCCGAACGGT AGCAGCCCAGCAGCTACGGGACCAGCTACGGCCCCTAGATACGGTAGCCT CTGCTGGCCTGTATCACCGTCCGTGTAGCTACCAAAGGTAGCGTAGCTAA CCGGTGTAATATAACCAGCCGCGTTTCCGCTGCTGGGTCGTTTGTGCAAG TTGTTGCTTGATGTGCAAACTTCGACACATATGTATCTCACGCGAACCAC ATTTTTTTGGGCTGCAAGTAGATGGACTTTTCTTCGCTCTCCGTGCGCTC TCCGTGCGCTTGTTGTAACTTGCGTGCATGTATCCCTCCCGCAACCTGCG CAGCTAACTCACCTCAAGCGAATACGGAGTTCTCAAGACCCTGGGAGAGG GAAAGTGCTGCAAGTGATCCTGTCGCCCCCCGACATGTACCACTCTCTTG ACGAGACCAAGCGGAAGGACATTGAGGAACGGTACCGTCTCAGCCCTACC GTGTGCGCTGTCCCCAAGCTCGAGCCTCGAACACGCGAACAGTTCAAGAG CGGGGGAGCTGTGTGGCCCATGATATTCCACCACAGGTGACAACACCATG GTTACTGCATTCTTTGGATGGGTTTGGGCTTGACGTTTTCAAGCGGCAGC GCTGCTTTCAGCTTCCCGACAGCAGTAATCCCATACTGTACTCCAGCACA TGTCAAGCGGGGAGAGAGCGCCTCAGTGCCTCATTGCTGCGAGCGCCGGG GGCTGATATGGCCGTGCTGACCAACCTTTTCTATTCCGGTTCTTACTCCC TGCCGCACAACCCCGCTTCCCGGCTCTGCTGCAATTTGGCCCGCAGCACG TCGGAAGAAGCCCGGCGTGCCGCTAGAGCTATCCCCGATCAAGACGCCCT CGACGCCGTCACCTTCATGAAAGACGCCCTCAAAGACGCCAGCACGGGGC GGCAACAAAACGGCGGCCGAGCAACGGTCGGAGCGGTACTAGTCGATCCC GCGGTGGGAAGGGGAAGAGGGAGGGTCGTCGCGACGGCCTCGCGAGAGAG GCAGCGGGTCCACGACGAGTGGCCGGCTTCGATGAGAGATCACCCGTTGC ACCACGCAGCCATGCTGTGCGTGCAAGGTGTCGGACGAGCGCTGTCGGCC CGACCGCAAGTAGGAGACGAGGGGGAGAGCAAGCCACATGTACCGCCGCG CGGGAAGAGGACAGAGGCAGAGGCAGCGGAGGGACATAAGAGTGCGGAGG GAAAGGGGGCGGTAGAGGTGCTGTCTTCCAAGCAGTATTTGTGCACCGGC TTCGACCTCTACATTACACGGGAGCCTTGCCTAATGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5679:904..2642-

>mRNA_L-elsbetiae_contig5679.14039.1 ID=mRNA_L-elsbetiae_contig5679.14039.1|Name=mRNA_L-elsbetiae_contig5679.14039.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1740bp|location=Sequence derived from alignment at L-elsbetiae_contig5679:904..2642- (Laminarionema elsbetiae ELsaHSoW15)
ATGTTGGAGGTACTTCAGGAAGATGATGAGATGTTGGAGGTACTTCAGGA
AGATGATGAGTTTGACCTGGCAGGATCAGCCAGAATGGAGGTGTTGATTT
CAGTTATCGAGCCTCGCCAGGCGAGCCAGATTGTGAAAGAATTATCAGGG
CTGCTCCCCTTTGAGGAGGCCAAGTTTGACCTGGCAGGATCAGCCAGAAT
GGAGGTGTTGATTTCAGTTATCGAGCCTCGCCAGGCGAGCCAGATTGTGA
AAGAATTATCAGGGCTGCTCCCCTTTGAGGAGGCCAAGCTAACTCACCTC
AAGCGAATACGGAGTTCTCAAGACCCTGGGAGAGGGAAAGTGCTGCAAGT
GATCCTGTCGCCCCCCGACATGTACCACTCTCTTGACGAGACCAAGCGGA
AGGACATTGAGGAACGGTACCGTCTCAGCCCTACCGTGTGCGCTGTCCCC
AAGCTCGAGCCTCGAACACGCGAACAGTTCAAGAGCGGGGGAGCTGTGTG
GCCCATGATATTCCACCACAGCTAACTCACCTCAAGCGAATACGGAGTTC
TCAAGACCCTGGGAGAGGGAAAGTGCTGCAAGTGATCCTGTCGCCCCCCG
ACATGTACCACTCTCTTGACGAGACCAAGCGGAAGGACATTGAGGAACGG
TACCGTCTCAGCCCTACCGTGTGCGCTGTCCCCAAGCTCGAGCCTCGAAC
ACGCGAACAGTTCAAGAGCGGGGGAGCTGTGTGGCCCATGATATTCCACC
ACAGCACGTCGGAAGAAGCCCGGCGTGCCGCTAGAGCTATCCCCGATCAA
GACGCCCTCGACGCCGTCACCTTCATGAAAGACGCCCTCAAAGACGCCAG
CACGGGGCGGCAACAAAACGGCGGCCGAGCAACGGTCGGAGCGGTACTAG
TCGATCCCGCGGTGGGAAGGGGAAGAGGGAGGGTCGTCGCGACGGCCTCG
CGAGAGAGGCAGCGGGTCCACGACGAGTGGCCGGCTTCGATGAGAGATCA
CCCGTTGCACCACGCAGCCATGCTGTGCGTGCAAGGTGTCGGACGAGCGC
TGTCGGCCCGACCGCAAGTAGGAGACGAGGGGGAGAGCAAGCCACATGTA
CCGCCGCGCGGGAAGAGGACAGAGGCAGAGGCAGCGGAGGGACATAAGAG
TGCGGAGGGAAAGGGGGCGGTAGAGGTGCTGTCTTCCAAGCAGTATTTGT
GCACCGGCTTCGACCTCTACATTACACGGGAGCCTTGCCTAATGTGACAC
GTCGGAAGAAGCCCGGCGTGCCGCTAGAGCTATCCCCGATCAAGACGCCC
TCGACGCCGTCACCTTCATGAAAGACGCCCTCAAAGACGCCAGCACGGGG
CGGCAACAAAACGGCGGCCGAGCAACGGTCGGAGCGGTACTAGTCGATCC
CGCGGTGGGAAGGGGAAGAGGGAGGGTCGTCGCGACGGCCTCGCGAGAGA
GGCAGCGGGTCCACGACGAGTGGCCGGCTTCGATGAGAGATCACCCGTTG
CACCACGCAGCCATGCTGTGCGTGCAAGGTGTCGGACGAGCGCTGTCGGC
CCGACCGCAAGTAGGAGACGAGGGGGAGAGCAAGCCACATGTACCGCCGC
GCGGGAAGAGGACAGAGGCAGAGGCAGCGGAGGGACATAAGAGTGCGGAG
GGAAAGGGGGCGGTAGAGGTGCTGTCTTCCAAGCAGTATTTGTGCACCGG
CTTCGACCTCTACATTACACGGGAGCCTTGCCTAATGTGA
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