mRNA_L-elsbetiae_contig5679.14039.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: D7G7W1_ECTSI (CMP/dCMP-type deaminase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7W1_ECTSI) HSP 1 Score: 392 bits (1006), Expect = 1.100e-133 Identity = 211/299 (70.57%), Postives = 235/299 (78.60%), Query Frame = 1 Query: 1 MLEVLQEDDEFDLAGSARMEVLISVIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVILSPPDMYHSLDETKRKDIEERYRLSPTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEEARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRG--RGRVVATASRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSA--------RPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQYLCTGFDLYITREPCLM 867 MLEV+QED EFDLAGSAR++VL+S I+PRQASQ+VK+LS LLP E AKL HLKRIRSSQ P G++LQV+LSPPDMYH+LDE KRK+I ERY L PTV AVPKLEPRTR QF SGG+ WPMIFHHSTSEEARRAAR IP+QDALDA+ FM+DAL DA TGRQQNGGR TVGAVLVDP G G RGRVVATASRERQ+V DE PASMRDHPLHHA MLCVQGVGRAL+A R Q D K GK +E+ ++ G VEVLS +QYLCTGFDLY+TREPCLM Sbjct: 1 MLEVVQEDHEFDLAGSARLDVLVSAIKPRQASQVVKDLSELLPLERAKLNHLKRIRSSQHPETGRLLQVLLSPPDMYHALDEAKRKEIVERYGLEPTVHAVPKLEPRTRAQFLSGGSAWPMIFHHSTSEEARRAARVIPEQDALDAIGFMRDALVDAETGRQQNGGRPTVGAVLVDPLGGCGGRRGRVVATASRERQKVRDEEPASMRDHPLHHAVMLCVQGVGRALAAGSRQEKVARKQEEDSAGGKLGKEREGKGSESLCSDADPPG---GVVEVLSPEQYLCTGFDLYVTREPCLM 296
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: A0A7S2KKU2_BIGNA (Hypothetical protein n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A7S2KKU2_BIGNA) HSP 1 Score: 115 bits (288), Expect = 2.980e-26 Identity = 83/274 (30.29%), Postives = 130/274 (47.45%), Query Frame = 1 Query: 70 SVIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVI-----LSPPDMYHSLDETKRKDIEERYRLSPTV--CAVPKLEPRTREQFKSGGAVWPMIFHHSTSEEARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATA-SRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQYLCTGFDLYITREPCLM 867 ++IEPR AS ++K++S +LP + HLKRIR L P D ++ LD R +++ +L+PT VP P T E++++ G WP+ +++ + + + ++ M++A+ G +NGG+ +G V+VDP RVVA A R R+R + HPLHHA M C+ V A+ PP +R + +G G + LSSK YLCTG+D+Y+T EPC+M Sbjct: 44 AIIEPRSASTLLKKVSEVLPIPNFR--HLKRIRKKTTAXXXXXXXXXXXXXXLCPEDDFNLLDGDLRSELQ---KLTPTQESVRVPSHPPETDEEYRAYGKHWPISSRPRPAQK-----KEFSEDEKKIMISHMREAISVGRLGASKNGGQLPIGCVIVDPK----SNRVVAKAYDRRRRRTEITSGEASCGHPLHHATMNCISAVAEYDRAK------------WPPNEQRK-------RRRDDGSGVEDALSSKPYLCTGYDMYVTHEPCVM 284
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: D8QYM6_SELML (CMP/dCMP-type deaminase domain-containing protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QYM6_SELML) HSP 1 Score: 107 bits (266), Expect = 2.930e-23 Identity = 87/289 (30.10%), Postives = 141/289 (48.79%), Query Frame = 1 Query: 34 DLAGSARMEVLISVIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVILSPPDMYHSLDETKRKDIEERYRLSPTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEEARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATASRERQRVHDEWPASMRD--------HPLHHAAMLCVQGVG---RALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQYLCTGFDLYITREPCLM 867 ++ SA ++V + I+ + AS ++KELS + P + L+H+KRIRS +D L +IL S ++ ++ E++ L + +PK RE++ + +WP FH ++ AR + + + FM A+ AS GR + GAV+VDP++G +V+A+ + P S D HPL HAAM+ ++ R L + DE + + +R EA AAE ++ V +S+ YLCTGFD+Y+TREPC M Sbjct: 16 EVDSSATVDVFAAHIQGKLASVLIKELSVVFPLTD--LSHIKRIRSKRDTEGP--LSIILCTRTDDSSTIPSQVAELVEKHSLETFIAKIPKHPAADREEWATQCNLWPTTFHPNS---ARPSKIQFNEDEERTIAAFMVRAMHQASLAIDH--GRLSNGAVIVDPSIG----QVIASG------YDESTPPSCTDCSSCSGGWHPLRHAAMVAIEQASERDRRLFPDDKECDEAT----LSVKRQRCEASAAESIHIESRSSSITVEASRPYLCTGFDIYLTREPCAM 281
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: A0A673AU73_9TELE (Adenosine deaminase tRNA specific 3 n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673AU73_9TELE) HSP 1 Score: 105 bits (263), Expect = 9.490e-23 Identity = 81/271 (29.89%), Postives = 120/271 (44.28%), Query Frame = 1 Query: 73 VIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVILSPPDMYH------SLDETKRKDIEERYRLSPTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEEARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATASRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQYLCTGFDLYITREPCLM 867 +++ ++ S++V+EL+GL P L H+KR+R+ ++ G L+V++ H S+D D P V VP P TR QF+ WP+ FH +M AL A GR+ GG VGAV VDPA+ R++A + HD HPLHHA M+C+ V R+ D+ + P E ++EG+ A + Y+CTG+DLY+TREPC+M Sbjct: 42 IVDKKETSRLVRELNGLYPM--ITLQHIKRVRACKEEGSPHPLEVLVCLVSDAHGQEKMVSIDSLLPSDFRRDGLGEPFVVKVPARPPLTRPQFEIASKHWPLAFHEDKQVTVALKGELFSPLQKAKMHMYMTTALTAAKAGRE--GGMEAVGAVAVDPAMD----RIIAVS-------HD----CRGKHPLHHAVMVCIDLVARSQGGGCYSYDQYPACHFSSPSSNPFE-------NTSEGEPAFQ-----PYICTGYDLYVTREPCVM 281
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: A0A3B4ZGP3_9TELE (Adenosine deaminase tRNA specific 3 n=1 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B4ZGP3_9TELE) HSP 1 Score: 104 bits (260), Expect = 2.410e-22 Identity = 84/270 (31.11%), Postives = 122/270 (45.19%), Query Frame = 1 Query: 73 VIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVIL----SPPDMYHSLDETKRKDIEERYRLSPTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEE-ARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATASRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQYLCTGFDLYITREPCLM 867 ++ ++ SQ+V+EL+ L P L H+KR+R+ ++ G L+V++ PDM ++ ++ P V VP P TR QF+ WP FH A R P Q A+ + +M A+ A GR+ G VGAV+VDPA+ R+VA HD DHPLHHA M+C+ V R+ D + PP + G S+ Y+CTG+DLY+TREPC+M Sbjct: 42 IVNKKETSQLVRELNSLYPLNG--LQHIKRVRARKEKGSPHPLEVLVCLVSDAPDMKVVSVDSLLPGVKPDGLGEPFVVKVPARAPLTRPQFELASQHWPTSFHEDKQVTVALRGELFSPPQKAVMHM-YMMSAVTAAKAGREL--GMEAVGAVVVDPAME----RIVAVG-------HD----CRGDHPLHHAVMVCIDLVARSQGGGCYCFDSYPACQFTPPTSNMFQ------------NGPDLEAGSQPYICTGYDLYVTREPCVM 279
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: ADAT3_HUMAN (Probable inactive tRNA-specific adenosine deaminase-like protein 3 n=39 Tax=Simiiformes TaxID=314293 RepID=ADAT3_HUMAN) HSP 1 Score: 104 bits (260), Expect = 2.590e-22 Identity = 95/273 (34.80%), Postives = 125/273 (45.79%), Query Frame = 1 Query: 73 VIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVIL---SPPDMYHSLDET-KRKDIEERYRLSPTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEEARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATASRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQ----YLCTGFDLYITREPCLM 867 V++ RQ S+++KE+S L P HLKR+R S+D G L+++L P SL E R ++ R P + VP P TR QF+ A WP FH + A R Q+ + M+ A+ A R G VGAV+VDPA RV+AT HD S D+PL HA M+CV V R +G P + A AA A GAV L + + YLCTG+DLY+TREPC M Sbjct: 50 VLDKRQTSRLLKEVSALHPLPAQ--PHLKRVRPSRDAGSPHALEMLLCLAGPASGPRSLAELLPRPAVDPRGLGQPFLVPVPARPPLTRGQFEEARAHWPTSFHEDKQVTSALAGRLFSTQERAAMQSHMERAVWAAR--RAAARGLRAVGAVVVDPA----SDRVLATG-------HD---CSCADNPLLHAVMVCVDLVARG---------QGRGTYDFRPFPACSFAPAAA--PQAVRAGAVRKLDADEDGLPYLCTGYDLYVTREPCAM 293
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: UPI00201551A8 (probable inactive tRNA-specific adenosine deaminase-like protein 3 n=2 Tax=Alosa TaxID=34772 RepID=UPI00201551A8) HSP 1 Score: 104 bits (260), Expect = 2.810e-22 Identity = 79/275 (28.73%), Postives = 128/275 (46.55%), Query Frame = 1 Query: 73 VIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVIL-----SPPDMYHSLDETKRKDI-EERYRLS----PTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEEARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATASRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQYLCTGFDLYITREPCLM 867 +I+ + S+++K L+ P + L H+KR+R+ + L+VI+ +PPD+ +S + + + E + S P + +P P TR QF+ A WP FH A + +M A++ A G+++ G VGAV+VDPA +++ATA HD + HPLHHA M+C+ V D + P G+ E +A++ G+V + Y+CTG+DLY+TREPC+M Sbjct: 43 IIDKKATSRLIKNLTTTYPLSD--LQHIKRVRACKSDKHPHPLEVIVCLVDDAPPDVKNSKEGSLASLLFSESFDSSGLGEPFIVKIPSSAPLTRPQFERASAHWPTSFHEDKQITAALRGQLFTAAQKAKMHKYMMAAIRAAKAGQER--GMVPVGAVMVDPA----SDQILATA-------HD---CTRGSHPLHHAVMVCIDLVAHGQGGGAHNFDPFPACQFTVPDGQLGE-DASDSVAQGPADGSVPEQRGQPYICTGYDLYVTREPCVM 298
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: A0A484CW83_PERFV (CMP/dCMP-type deaminase domain-containing protein n=7 Tax=Percidae TaxID=8165 RepID=A0A484CW83_PERFV) HSP 1 Score: 102 bits (254), Expect = 1.810e-21 Identity = 87/272 (31.99%), Postives = 126/272 (46.32%), Query Frame = 1 Query: 73 VIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVIL-----SPPDMYHSLDETKRKDIEERYRLS-PTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEE-ARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATASRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQYLCTGFDLYITREPCLM 867 ++ ++ S++++ELS L P L H+KR+R+ ++ G L+V++ +P ++D D R L P V VP P TR QF+ WP FH A R P Q A + +M AL A G++ G VGAV+VDPA R+VA HD DHPLHHAAM+C+ V ++ D + P ++ +SA G A S + Y+CTG+DLY+TREPC+M Sbjct: 42 IVNKKETSRLLRELSTLYPLNG--LQHIKRVRAVREKGSPHPLEVLVCLVSDAPDTKVINIDSLLPSDGVRRDGLGEPFVVKVPARPPLTRPQFELASKHWPTSFHEDKQVTVALRGELFSPPQKARMHM-YMTSALTAAQAGKEL--GMEAVGAVVVDPATE----RIVAVG-------HD----CRGDHPLHHAAMVCIDLVAQSQGGGRYSFDRYPACGFTSP--------TSDPFQSAPGSEA----SPQPYICTGYDLYVTREPCVM 281
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: UPI00148F45B5 (probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1 n=2 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148F45B5) HSP 1 Score: 102 bits (254), Expect = 1.960e-21 Identity = 87/275 (31.64%), Postives = 125/275 (45.45%), Query Frame = 1 Query: 73 VIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVIL----SPPDMY-----HSLDETKRKDIEERYRLSPTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEE-ARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATASRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQYLCTGFDLYITREPCLM 867 ++ R+ S++V+EL+ L P + L H+KR+R+ ++ L+V+L PDM L K + + E P V VP P TR QF+ WP FH A R P Q L T+M A+ A G + G VGAV+VDP + +V+A HD DHPLHHA M+C+ V R+ D + PP + T + S + +G SS+ Y+CTG+D Y+TREPC+M Sbjct: 51 IVNKRETSRLVRELNSLCPLSD--LQHVKRVRAVKEKSSPHPLEVLLCLVSDAPDMKVVNIKSLLPSGKCEGLGE-----PFVVKVPARPPLTRPQFELSSKHWPTSFHEDKQVTVALRGELFGPAQKTL-MHTYMMSAVTTARAGHRM--GMEAVGAVVVDPV----KEKVIAVG-------HD----CRGDHPLHHAVMVCIDLVARSQGGGCYSFDRYAACSFTPPAPETTPS-------SPDSEG-----SSQPYICTGYDFYVTREPCVM 288
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Match: A0A7J8I3R9_MOLMO (Adenosine deaminase tRNA specific 3 n=2 Tax=Molossus molossus TaxID=27622 RepID=A0A7J8I3R9_MOLMO) HSP 1 Score: 101 bits (252), Expect = 3.630e-21 Identity = 87/273 (31.87%), Postives = 130/273 (47.62%), Query Frame = 1 Query: 73 VIEPRQASQIVKELSGLLPFEEAKLTHLKRIRSSQDPGRGKVLQVIL---SPPDMYHSLDET-KRKDIEERYRLSPTVCAVPKLEPRTREQFKSGGAVWPMIFHHSTSEEARRAARAIPDQDALDAVTFMKDALKDASTGRQQNGGRATVGAVLVDPAVGRGRGRVVATASRERQRVHDEWPASMRDHPLHHAAMLCVQGVGRALSARPQVGDEGESKPHVPPRGKRTEAEAAEGHKSAEGKGAVEVLSSKQ----YLCTGFDLYITREPCLM 867 +++ RQ S+++KE+S + P + THLKR+R S+D R +L+++L P SL E + ++ R P + VP P TR QF+ A WP FH A R Q+ ++ M+ A+ A + GG VGAV+VDPA G+V+A HD S +PL HA M+C+ L A+ Q + +PH P A +G ++ + E + + Y+CTG+DLYITREPC M Sbjct: 50 ILDKRQTSRLLKEVSAVHPLPDQ--THLKRVRPSRDASRPHLLEILLCLAEPAAGKRSLAELLPQPAVDPRGLGQPFLVPVPAWPPLTRGQFEEARAHWPTSFHEDKHVTRALAGRLFSAQEQVEMQGHMERAVWMAQ--QAATGGLRAVGAVVVDPA----SGQVLAMG-------HD---CSSSANPLLHATMVCID-----LVAQGQGQGTYDFRPH--PACSFAPASTHQGIQAVSVRTLNEDMDMDEDGLPYVCTGYDLYITREPCAM 297 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5679.14039.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5679.14039.1 >prot_L-elsbetiae_contig5679.14039.1 ID=prot_L-elsbetiae_contig5679.14039.1|Name=mRNA_L-elsbetiae_contig5679.14039.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=290bp MLEVLQEDDEFDLAGSARMEVLISVIEPRQASQIVKELSGLLPFEEAKLTback to top mRNA from alignment at L-elsbetiae_contig5679:904..2642- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5679.14039.1 ID=mRNA_L-elsbetiae_contig5679.14039.1|Name=mRNA_L-elsbetiae_contig5679.14039.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1739bp|location=Sequence derived from alignment at L-elsbetiae_contig5679:904..2642- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5679:904..2642- >mRNA_L-elsbetiae_contig5679.14039.1 ID=mRNA_L-elsbetiae_contig5679.14039.1|Name=mRNA_L-elsbetiae_contig5679.14039.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1740bp|location=Sequence derived from alignment at L-elsbetiae_contig5679:904..2642- (Laminarionema elsbetiae ELsaHSoW15)back to top |