Homology
BLAST of mRNA_L-elsbetiae_contig5649.13988.1 vs. uniprot
Match:
D8LLV8_ECTSI (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV8_ECTSI)
HSP 1 Score: 176 bits (446), Expect = 3.690e-49
Identity = 85/99 (85.86%), Postives = 89/99 (89.90%), Query Frame = 3
Query: 3 LARMFAQEQAAIEDLGDMWKRDPKWTEFFLPQYMLFLLYASFAHSPGLQELLLGRCETSVHTAHTIYWFLRAFCLQGARVTPVGVKAIEQMLQEVVSRG 299
LARMFAQEQAAIE+LGDMW RDPKWT FFLPQY LFLLYASFAHS LQ+LLL RC +SV TAH +YWFLRAFCLQGARVTPVGV AIEQMLQEVVSRG
Sbjct: 218 LARMFAQEQAAIEELGDMWVRDPKWTGFFLPQYTLFLLYASFAHSSRLQDLLLDRCGSSVQTAHALYWFLRAFCLQGARVTPVGVAAIEQMLQEVVSRG 316
BLAST of mRNA_L-elsbetiae_contig5649.13988.1 vs. uniprot
Match:
A0A6H5JBM1_9PHAE (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBM1_9PHAE)
HSP 1 Score: 174 bits (440), Expect = 2.400e-48
Identity = 84/99 (84.85%), Postives = 88/99 (88.89%), Query Frame = 3
Query: 3 LARMFAQEQAAIEDLGDMWKRDPKWTEFFLPQYMLFLLYASFAHSPGLQELLLGRCETSVHTAHTIYWFLRAFCLQGARVTPVGVKAIEQMLQEVVSRG 299
LARMFAQEQAAIE+LGDMW RDPKWT FFLPQY LFLLYASFAHS LQ+LLL RC +SV TAH +YWFLRAFCLQGARVTP GV AIEQMLQEVVSRG
Sbjct: 205 LARMFAQEQAAIEELGDMWVRDPKWTGFFLPQYTLFLLYASFAHSSRLQDLLLDRCGSSVQTAHALYWFLRAFCLQGARVTPEGVTAIEQMLQEVVSRG 303
BLAST of mRNA_L-elsbetiae_contig5649.13988.1 vs. uniprot
Match:
A0A7S3USU3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USU3_HETAK)
HSP 1 Score: 78.6 bits (192), Expect = 1.200e-16
Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 3
Query: 36 IEDLGDMWKRDPKWTEFFLPQYMLFLLYASFAHSPGLQELLLGRCETSVHTAHTIYWFLRAFCLQGARVTPVGVKAIEQMLQEV 287
++D+ + RDP+ EF+L Q +LFLL+ SF + L+ LLLGRC S+H H ++W LRAF +GAR+T AI +L EV
Sbjct: 6 MDDIDRGFDRDPEGYEFYLTQLVLFLLHGSFRDAQRLEALLLGRCRQSLHFGHQMFWVLRAFGAEGARLTDEAQAAIAALLNEV 89
BLAST of mRNA_L-elsbetiae_contig5649.13988.1 vs. uniprot
Match:
A0A5A8C9G1_CAFRO (PI3K/PI4K catalytic domain-containing protein n=7 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C9G1_CAFRO)
HSP 1 Score: 71.6 bits (174), Expect = 1.930e-12
Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = 3
Query: 3 LARMFAQEQAAIEDLGDMWKRDPKWTEFFLPQYMLFLLYA-SFAHSPG-LQELLLGRCETSVHTAHTIYWFLRAFCLQGARVTPV------GVKAIEQMLQEVVSRG 299
+AR++A E+ A+ +L + KR P F+ P + FLL+ A S G L+ LLG+CETS+H +H +YWFL AF A +P+ G+ Q+++ V +G
Sbjct: 135 IARLYAHEEDAVRELYERHKRSPSMMRFYAPLLVNFLLHGHGEARSSGELEVFLLGKCETSIHFSHRVYWFLAAFAPDNAYSSPICGAIRGGLLGQSQLMRAVEVQG 241
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5649.13988.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 4
0 1 Expect = 3.69e-49 / Id = 85.86 Expect = 2.40e-48 / Id = 84.85 Expect = 1.20e-16 / Id = 45.24 Expect = 1.93e-12 / Id = 36.45 Sequence D8LLV8_ECTSI A0A6H5JBM1_9PHAE A0A7S3USU3_HETAK A0A5A8C9G1_CAFRO
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Hectar predicted targeting category other localisation
Exons 3
Model size 301
Cds size 258
Stop 1
Start 0
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622816600.6720362-CDS-L-elsbetiae_contig5649:11342..11440 1622816600.6720362-CDS-L-elsbetiae_contig5649:11342..11440 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5649 11343..11440 +
1691683676.3884473-CDS-L-elsbetiae_contig5649:11342..11440 1691683676.3884473-CDS-L-elsbetiae_contig5649:11342..11440 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5649 11343..11440 +
1622816600.68629-CDS-L-elsbetiae_contig5649:11716..11876 1622816600.68629-CDS-L-elsbetiae_contig5649:11716..11876 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5649 11717..11876 +
1691683676.3988025-CDS-L-elsbetiae_contig5649:11716..11876 1691683676.3988025-CDS-L-elsbetiae_contig5649:11716..11876 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5649 11717..11876 +
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622816600.6983933-UTR-L-elsbetiae_contig5649:11876..11890 1622816600.6983933-UTR-L-elsbetiae_contig5649:11876..11890 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig5649 11877..11890 +
1691683676.410312-UTR-L-elsbetiae_contig5649:11876..11890 1691683676.410312-UTR-L-elsbetiae_contig5649:11876..11890 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig5649 11877..11890 +
1622816600.7130246-UTR-L-elsbetiae_contig5649:12240..12268 1622816600.7130246-UTR-L-elsbetiae_contig5649:12240..12268 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig5649 12241..12268 +
1691683676.42067-UTR-L-elsbetiae_contig5649:12240..12268 1691683676.42067-UTR-L-elsbetiae_contig5649:12240..12268 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig5649 12241..12268 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5649.13988.1
>prot_L-elsbetiae_contig5649.13988.1 ID=prot_L-elsbetiae_contig5649.13988.1|Name=mRNA_L-elsbetiae_contig5649.13988.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=86bp
SWLACLRKSRRPSKIWGTCGSAIRNGRSFSCRSTCCFSCTHPSRTAPACR SSSWAAARRACTRPTPSTGFSGRFVCRAPGSPPWA* back to top mRNA from alignment at L-elsbetiae_contig5649:11343..12268+
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5649.13988.1 ID=mRNA_L-elsbetiae_contig5649.13988.1|Name=mRNA_L-elsbetiae_contig5649.13988.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=926bp|location=Sequence derived from alignment at L-elsbetiae_contig5649:11343..12268+ (Laminarionema elsbetiae ELsaHSoW15)TCCTGGCTCGCATGTTTGCGCAAGAGCAGGCGGCCATCGAAGATCTGGGG
GACATGTGGAAGCGCGATCCGAAATGGACGGAGTTTTTCCTGCCGCAG GT
GAGCTGCGCTTGCCGCGCCGCACACGACCCCCCCCCCCCGGGGTGTCGCT
CGCTGCTGGTGTCTCTCCTCCATTCTCGTCACCCCCCCGAAAACTACTTG
GTACTATGACCCTCGCCTCCCCCCCCCCCCCCCCCCCCCCCGCGCCCTCC
TTACCTCTCTCGGCCCTGCTTTACGCGCCAACGAGTTACTAACACGGTTG
ATTTTCCGTCTGTGTTTTGTTTTCTGCTCCTTGTGTGGGGGTGGTGTGCA
CGCGCGCGGCACACCGCAACACAGTACATGCTGTTTCTCCTGTACGCATC
CTTCGCGCACAGCCCCGGCCTGCAGGAGCTCCTCTTGGGCCGCTGCGAGA
CGAGCGTGCACACGGCCCACACCATCTACTGGTTTCTCAGGGCGTTTTGT
CTGCAGGGCGCCAGGGTCACCCCCGTGGGCGTGA AGGCCATCGAGCAG GT
GCGCGTAGGGGGGGCTCCGTGTCGCTTTCAACGAAGAAGAAAGGTACTGC
ACTGTACACGAAGGGGAGAGGGAGGGCGAGAGACAGTCCGCTTCGCCCGG
GGTTCAACCCGCCGGCGGGGCTTTCTGTTGTTGGAGGGTCCCGATGCGAA
GGTTGATGGTCGGCGGGGGAGGGGTAGGGGGGGGGGGGGGGGGGATGCAC
GCCTCGGTGCGCTTGGTGGAAAACGAAGTTGTTGGTCGTCCAGCTCTTTG
CCGGCGGCCCGCCCCCTCAGCTTGTTTGGTCCCCCCCCCCCCCCGCACCA
CGCCACGCCTTTGCACGCACCATTGCACCCCACCGATTGCGAGCGCAGAT
GTTGCAGGAGGTGGTTAGTCGGGGGG back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5649:11343..12268+
>mRNA_L-elsbetiae_contig5649.13988.1 ID=mRNA_L-elsbetiae_contig5649.13988.1|Name=mRNA_L-elsbetiae_contig5649.13988.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=516bp|location=Sequence derived from alignment at L-elsbetiae_contig5649:11343..12268+ (Laminarionema elsbetiae ELsaHSoW15) TCCTGGCTCGCATGTTTGCGCAAGAGCAGGCGGCCATCGAAGATCTGGGG GACATGTGGAAGCGCGATCCGAAATGGACGGAGTTTTTCCTGCCGCAGTC CTGGCTCGCATGTTTGCGCAAGAGCAGGCGGCCATCGAAGATCTGGGGGA CATGTGGAAGCGCGATCCGAAATGGACGGAGTTTTTCCTGCCGCAGTACA TGCTGTTTCTCCTGTACGCATCCTTCGCGCACAGCCCCGGCCTGCAGGAG CTCCTCTTGGGCCGCTGCGAGACGAGCGTGCACACGGCCCACACCATCTA CTGGTTTCTCAGGGCGTTTTGTCTGCAGGGCGCCAGGGTCACCCCCGTGG GCGTGATACATGCTGTTTCTCCTGTACGCATCCTTCGCGCACAGCCCCGG CCTGCAGGAGCTCCTCTTGGGCCGCTGCGAGACGAGCGTGCACACGGCCC ACACCATCTACTGGTTTCTCAGGGCGTTTTGTCTGCAGGGCGCCAGGGTC ACCCCCGTGGGCGTGA back to top