mRNA_L-elsbetiae_contig5632.13977.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5632.13977.1 vs. uniprot
Match: D7FK47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK47_ECTSI) HSP 1 Score: 169 bits (427), Expect = 4.660e-51 Identity = 81/103 (78.64%), Postives = 91/103 (88.35%), Query Frame = 1 Query: 1 QRRFHWNMAKAPNGERVLAFKGDSLESLANLLARGLTPSFDAVYVNASHEMKDVLGDALLSFRLLKVGGVMIFGDYWKQGVARAAAALEDALGDSLQILHRDK 309 + RFHWNM KAPNGERV+AFKGDSLESLA L+A GLT SFD VYV+ASHEMKD LGDALLSFRLLKVGGVMIF D+W +GVARA +A E+AL DSLQ+LH+DK Sbjct: 114 EERFHWNMGKAPNGERVVAFKGDSLESLAGLVASGLTSSFDVVYVDASHEMKDTLGDALLSFRLLKVGGVMIFDDFWMKGVARATSAFEEALWDSLQVLHKDK 216
BLAST of mRNA_L-elsbetiae_contig5632.13977.1 vs. uniprot
Match: A0A6H5JQS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQS8_9PHAE) HSP 1 Score: 146 bits (368), Expect = 2.790e-42 Identity = 71/101 (70.30%), Postives = 84/101 (83.17%), Query Frame = 1 Query: 7 RFHWNMAKAPNGERVLAFKGDSLESLANLLARGLTPSFDAVYVNASHEMKDVLGDALLSFRLLKVGGVMIFGDYWKQGVARAAAALEDALGDSLQILHRDK 309 RF NMA+ PNG+RV+AFKG SLESLAN+LA GL FDAV ++ SHEM DVLGDALLSFR+LKVGGVMIF DYW +GVA+A AA E+ALGD L++LH D+ Sbjct: 63 RFRSNMARIPNGDRVVAFKGSSLESLANILASGLDSRFDAVLLDGSHEMNDVLGDALLSFRMLKVGGVMIFDDYWMRGVAQATAAFEEALGDYLEVLHSDE 163
BLAST of mRNA_L-elsbetiae_contig5632.13977.1 vs. uniprot
Match: D7FK29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK29_ECTSI) HSP 1 Score: 146 bits (369), Expect = 1.470e-41 Identity = 71/101 (70.30%), Postives = 85/101 (84.16%), Query Frame = 1 Query: 7 RFHWNMAKAPNGERVLAFKGDSLESLANLLARGLTPSFDAVYVNASHEMKDVLGDALLSFRLLKVGGVMIFGDYWKQGVARAAAALEDALGDSLQILHRDK 309 RF NMA+ PNG+RV+AFKG SLESLAN+LA GL FDAV+++ SHEMK+VL DALLSFR+LKVGGVMIF DYW +GVA A AA E+ALGD L++LHRD+ Sbjct: 140 RFRSNMARVPNGDRVVAFKGTSLESLANILASGLDSRFDAVFLDGSHEMKNVLRDALLSFRMLKVGGVMIFDDYWMRGVAHATAAFEEALGDYLEVLHRDE 240
BLAST of mRNA_L-elsbetiae_contig5632.13977.1 vs. uniprot
Match: A0A7S2V1H4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1H4_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.520e-15 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 1 Query: 7 RFHWNMAKAPNGERVLAFKGDSLESLANLLARGLTPSFDAVYVNASHEMKDVLGDALLSFRLLKVGGVMIFGDY 228 R+H N PN E++ +GDSL LA L+ G +D +YV+ HE+ +VL D++LSFRLLK+GG+MIF DY Sbjct: 55 RYHQNTCSHPNKEKIRILEGDSLSGLAQLV--GENKKYDVIYVDGGHEVSEVLADSVLSFRLLKIGGLMIFDDY 126
BLAST of mRNA_L-elsbetiae_contig5632.13977.1 vs. uniprot
Match: A0A7S4KFR5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4KFR5_9EUKA) HSP 1 Score: 75.9 bits (185), Expect = 7.150e-15 Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = 1 Query: 7 RFHWNMAKAPNGERVLAFKGDSLESLANLLARGLT-------PSFDAVYVNASHEMKDVLGDALLSFRLLKVGGVMIFGDYW---KQGVARAAAALEDALGDSLQILHR 303 RF N+A+ PNG RV F+G +L +L ++A +FD +YV+A H DVL DA L+FRLL+VGG++ F DY + G+ A AA E + L+ R Sbjct: 68 RFSANVARTPNGGRVRTFRGSTLAALGGMIAAAADGDQAAEGDAFDLIYVDAGHSASDVLADAALAFRLLRVGGLVFFDDYHGRCRDGIDAAVAAHEPGTFERLEADQR 176
BLAST of mRNA_L-elsbetiae_contig5632.13977.1 vs. uniprot
Match: A0A7T4N0Q6_9BURK (Class I SAM-dependent methyltransferase n=1 Tax=Paraburkholderia ginsengisoli TaxID=311231 RepID=A0A7T4N0Q6_9BURK) HSP 1 Score: 74.3 bits (181), Expect = 3.730e-14 Identity = 43/82 (52.44%), Postives = 51/82 (62.20%), Query Frame = 1 Query: 7 RFHWNM----AKAPNGERVLAFKGDSLESLANLLARGLTPSFDAVYVNASHEMKDVLGDALLSFRLLKVGGVMIFGDY-WKQ 237 RFH N+ K P+ RV KG S E LA LLA G FD VYV+ SH+ DVL DA+L FRLLKVGG++ F DY W + Sbjct: 85 RFHHNVRLAAGKYPDRVRVTVHKGYSDECLARLLADGKKGYFDFVYVDGSHQAADVLADAVLGFRLLKVGGIIAFDDYLWSE 166
BLAST of mRNA_L-elsbetiae_contig5632.13977.1 vs. uniprot
Match: A0A7G8VVU2_9BURK (Class I SAM-dependent methyltransferase n=2 Tax=unclassified Variovorax TaxID=663243 RepID=A0A7G8VVU2_9BURK) HSP 1 Score: 72.8 bits (177), Expect = 1.450e-13 Identity = 40/78 (51.28%), Postives = 50/78 (64.10%), Query Frame = 1 Query: 7 RFHWNMA----KAPNGERVLAFKGDSLESLANLLARGLTPSFDAVYVNASHEMKDVLGDALLSFRLLKVGGVMIFGDY 228 RFH N A AP+ ++ KG S LA L+ +G +FD VYV+ SH+ DVL DA+L FRLL+VGGVMIF DY Sbjct: 85 RFHANTALAIRNAPSAVNLVVHKGLSDVCLAQLVGQGHAETFDFVYVDGSHQAPDVLADAVLGFRLLRVGGVMIFDDY 162
BLAST of mRNA_L-elsbetiae_contig5632.13977.1 vs. uniprot
Match: A0A1G5IZ77_9HYPH (Methyltransferase domain-containing protein n=1 Tax=Microvirga guangxiensis TaxID=549386 RepID=A0A1G5IZ77_9HYPH) HSP 1 Score: 72.4 bits (176), Expect = 2.030e-13 Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 31 APNGERVLAFKGDSLESLANLLARGLTPSFDAVYVNASHEMKDVLGDALLSFRLLKVGGVMIFGDY 228 APN ++ KG S LA +LA G SFD VYV+ SH+ DVL DA+LSFRLLK GG++IF DY Sbjct: 97 APNPVELVVHKGFSHAQLAKILASGHESSFDMVYVDGSHQAPDVLCDAILSFRLLKTGGLLIFDDY 162
BLAST of mRNA_L-elsbetiae_contig5632.13977.1 vs. uniprot
Match: A0A1H0YHQ6_9BURK (Methyltransferase domain-containing protein n=2 Tax=Paraburkholderia fungorum TaxID=134537 RepID=A0A1H0YHQ6_9BURK) HSP 1 Score: 71.2 bits (173), Expect = 6.660e-13 Identity = 41/86 (47.67%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 1 QRRFHWNMAKA----PNGERVLAFKGDSLESLANLLARGLTPSFDAVYVNASHEMKDVLGDALLSFRLLKVGGVMIFGDY-WKQGV 243 +RRFH N+A A P + KG S + LA L+A G FD VYV+ SH+ DVL DA+L FRLL+VGGV+ F DY W + + Sbjct: 94 ERRFHHNVALAAARYPGRATIEVHKGFSDDCLAGLIAAGKKGYFDFVYVDGSHQAADVLVDAVLGFRLLRVGGVIAFDDYLWSEAL 179
BLAST of mRNA_L-elsbetiae_contig5632.13977.1 vs. uniprot
Match: A0A4P7CMF3_9PAST (Class I SAM-dependent methyltransferase n=3 Tax=Actinobacillus indolicus TaxID=51049 RepID=A0A4P7CMF3_9PAST) HSP 1 Score: 70.1 bits (170), Expect = 1.490e-12 Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = 1 Query: 22 MAKAPNGERVLAFKGDSLESLANLLARGLTPSFDAVYVNASHEMKDVLGDALLSFRLLKVGGVMIFGDY 228 +++ N +V+ +KG S E + LLA+G + FD +YV+ SHE DVL DALL+ RL+KVGGV+ F DY Sbjct: 91 LSQVTNSVKVMKYKGYSHERMIELLAKGYSNYFDFIYVDGSHEAPDVLFDALLAHRLVKVGGVIAFDDY 159 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5632.13977.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5632.13977.1 >prot_L-elsbetiae_contig5632.13977.1 ID=prot_L-elsbetiae_contig5632.13977.1|Name=mRNA_L-elsbetiae_contig5632.13977.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=96bp MAKAPNGERVLAFKGDSLESLANLLARGLTPSFDAVYVNASHEMKDVLGDback to top mRNA from alignment at L-elsbetiae_contig5632:10539..11987- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5632.13977.1 ID=mRNA_L-elsbetiae_contig5632.13977.1|Name=mRNA_L-elsbetiae_contig5632.13977.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1449bp|location=Sequence derived from alignment at L-elsbetiae_contig5632:10539..11987- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5632:10539..11987- >mRNA_L-elsbetiae_contig5632.13977.1 ID=mRNA_L-elsbetiae_contig5632.13977.1|Name=mRNA_L-elsbetiae_contig5632.13977.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=576bp|location=Sequence derived from alignment at L-elsbetiae_contig5632:10539..11987- (Laminarionema elsbetiae ELsaHSoW15)back to top |