Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 388 |
Cds size | 387 |
Stop | 1 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816589.4343374-UTR-L-elsbetiae_contig5575:60..61 | 1622816589.4343374-UTR-L-elsbetiae_contig5575:60..61 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5575 61..61 + |
1691683668.0565846-UTR-L-elsbetiae_contig5575:60..61 | 1691683668.0565846-UTR-L-elsbetiae_contig5575:60..61 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5575 61..61 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816589.446279-CDS-L-elsbetiae_contig5575:61..448 | 1622816589.446279-CDS-L-elsbetiae_contig5575:61..448 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5575 62..448 + |
1691683668.075176-CDS-L-elsbetiae_contig5575:61..448 | 1691683668.075176-CDS-L-elsbetiae_contig5575:61..448 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5575 62..448 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5575.13887.1 >prot_L-elsbetiae_contig5575.13887.1 ID=prot_L-elsbetiae_contig5575.13887.1|Name=mRNA_L-elsbetiae_contig5575.13887.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=129bp
MSMLDRESLLSVVDTGQIIDSMHESDQPGGTEPLEQARQHPGASLGGFVV QLETSERVQSSAEDPRSPFDSRGCASSYGGPAEDPRSTFDPGGRPCFQEQ PKEDRRPSSHQPYFRCAARGASKCPRAI* back to topmRNA from alignment at L-elsbetiae_contig5575:61..448+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5575.13887.1 ID=mRNA_L-elsbetiae_contig5575.13887.1|Name=mRNA_L-elsbetiae_contig5575.13887.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=388bp|location=Sequence derived from alignment at L-elsbetiae_contig5575:61..448+ (Laminarionema elsbetiae ELsaHSoW15) GATGTCGATGCTGGATCGCGAATCTCTCCTCTCCGTGGTGGATACGGGTC
AGATCATCGACAGCATGCATGAGAGTGACCAGCCCGGCGGGACCGAACCA
CTGGAGCAAGCTAGACAGCACCCCGGTGCGTCGCTGGGGGGCTTTGTGGT
GCAGCTAGAAACCTCAGAGAGAGTTCAATCTTCGGCCGAGGACCCGCGTT
CTCCCTTTGACTCCAGAGGATGCGCGAGCTCCTACGGAGGACCCGCCGAA
GACCCGCGCTCTACCTTCGATCCCGGAGGACGCCCGTGCTTCCAAGAGCA
ACCCAAGGAGGATCGGCGTCCTTCCTCCCATCAACCGTACTTCCGGTGTG
CCGCGCGAGGGGCTTCGAAGTGCCCAAGAGCAATATAA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5575:61..448+ >mRNA_L-elsbetiae_contig5575.13887.1 ID=mRNA_L-elsbetiae_contig5575.13887.1|Name=mRNA_L-elsbetiae_contig5575.13887.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=774bp|location=Sequence derived from alignment at L-elsbetiae_contig5575:61..448+ (Laminarionema elsbetiae ELsaHSoW15) ATGTCGATGCTGGATCGCGAATCTCTCCTCTCCGTGGTGGATACGGGTCA GATCATCGACAGCATGCATGAGAGTGACCAGCCCGGCGGGACCGAACCAC TGGAGCAAGCTAGACAGCACCCCGGTGCGTCGCTGGGGGGCTTTGTGGTG CAGCTAGAAACCTCAGAGAGAGTTCAATCTTCGGCCGAGGACCCGCGTTC TCCCTTTGACTCCAGAGGATGCGCGAGCTCCTACGGAGGACCCGCCGAAG ACCCGCGCTCTACCTTCGATCCCGGAGGACGCCCGTGCTTCCAAGAGCAA CCCAAGGAGGATCGGCGTCCTTCCTCCCATCAACCGTACTTCCGGTGTGC CGCGCGAGGGGCTTCGAAGTGCCCAAGAGCAATATAAATGTCGATGCTGG ATCGCGAATCTCTCCTCTCCGTGGTGGATACGGGTCAGATCATCGACAGC ATGCATGAGAGTGACCAGCCCGGCGGGACCGAACCACTGGAGCAAGCTAG ACAGCACCCCGGTGCGTCGCTGGGGGGCTTTGTGGTGCAGCTAGAAACCT CAGAGAGAGTTCAATCTTCGGCCGAGGACCCGCGTTCTCCCTTTGACTCC AGAGGATGCGCGAGCTCCTACGGAGGACCCGCCGAAGACCCGCGCTCTAC CTTCGATCCCGGAGGACGCCCGTGCTTCCAAGAGCAACCCAAGGAGGATC GGCGTCCTTCCTCCCATCAACCGTACTTCCGGTGTGCCGCGCGAGGGGCT TCGAAGTGCCCAAGAGCAATATAA back to top
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