mRNA_L-elsbetiae_contig54.13615.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig54.13615.1
Unique NamemRNA_L-elsbetiae_contig54.13615.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match: D7FIM7_ECTSI (Phosphoglycerate mutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM7_ECTSI)

HSP 1 Score: 486 bits (1252), Expect = 3.030e-170
Identity = 238/266 (89.47%), Postives = 250/266 (93.98%), Query Frame = 2
Query:  209 ETGIAHRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLRSPDPDTLLSAELLSVDGAPAGGVLAAAAGEVNAF 1006
            ET  +HRVVFLRHGESTWNRDDRHIGWTDVPLTEKGE EAL AGRALR+EGFEFDVVF+S+LKRVLKTEHIVMDELDQLWVPE+KD+RLNERHYGDCIGKTKPEAEEAFGKENVALWASSYD+AP PMSTDGLYYPKDDRRY+HVVDE+G CAIPRTECMKDVSRRVVGYWEEEI PVVRSGKRVLVAGHANMLKTLLQHLDGI DDVIV M VPRATP+VY+LG DMKPLRSP PDTLLSAELLSVDGAPA   +AAA GEVNAF
Sbjct:   17 ETTTSHRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYQHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVTMKVPRATPIVYDLGADMKPLRSPLPDTLLSAELLSVDGAPAR--MAAADGEVNAF 280          
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match: A0A1C7HIQ3_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A1C7HIQ3_9BURK)

HSP 1 Score: 253 bits (646), Expect = 6.560e-79
Identity = 114/228 (50.00%), Postives = 158/228 (69.30%), Query Frame = 2
Query:  224 HRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLRS 907
            +++V +RHGES WN ++R  GW DV LTEKG +EA  AG+ L+++GF FD+ ++S+LKR ++T  I +DELDQL++P +KDWRLNERHYG   G  K E  E FG E V +W  SYD+ PP +S +   +P +  RYR    E     +P TEC+KD  +RVV YWE EIVP +R GK++L+  H N L+ L++HLD I D  IVG+ +P  TP+VYEL ++MKP++S
Sbjct:    2 YKIVLMRHGESQWNLENRFTGWVDVDLTEKGRKEAALAGQLLKKQGFVFDLCYTSVLKRAIRTLCIALDELDQLYLPVIKDWRLNERHYGALQGLNKKETAEKFGNEQVMIWRRSYDVPPPALSKESPMWPANQSRYRLEDPE----LMPLTECLKDTVKRVVPYWENEIVPKIREGKQILITAHGNSLRALIKHLDNISDADIVGLNIPTGTPLVYELDENMKPIKS 225          
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match: A0A7C5ENZ6_9DELT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Desulfobacca acetoxidans TaxID=60893 RepID=A0A7C5ENZ6_9DELT)

HSP 1 Score: 253 bits (645), Expect = 8.980e-79
Identity = 117/227 (51.54%), Postives = 154/227 (67.84%), Query Frame = 2
Query:  224 HRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLR 904
            +++V LRHGES WNR++R  GW DV L+EKG EEAL AGR L REGF FDV F+S+LKR +KT  +V++E+D +W+P    WRLNERHYG   G  K E  E  G E V +W  SYD+ PPP++ D  YYP  D RY +V  E     +P +EC+KDV  R + YW E + P V+SG+RV++A H N L+ L+++LD I D  IV + +P   P+VYEL QD+KPLR
Sbjct:    2 YKLVLLRHGESVWNRENRFTGWIDVGLSEKGVEEALEAGRVLAREGFVFDVAFTSVLKRAIKTLWLVLEEMDLMWIPIHHSWRLNERHYGALQGLNKVETVERHGMEQVKIWRRSYDVPPPPLTPDSPYYPGRDPRYANVPKEE----LPLSECLKDVVARFLPYWHETLAPAVKSGQRVIIAAHGNSLRALVKYLDNISDADIVELNIPTGIPLVYELDQDLKPLR 224          
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match: A0A554WS00_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=5 Tax=Burkholderiales TaxID=80840 RepID=A0A554WS00_9BURK)

HSP 1 Score: 253 bits (646), Expect = 1.070e-78
Identity = 115/236 (48.73%), Postives = 155/236 (65.68%), Query Frame = 2
Query:  197 REEGETGIAHRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLR 904
            R      I H++V +RHGESTWN ++R  GWTDV LT  G  +A+ AGR LR EG++FD+ F+S+LKR + T   V+DE+D+ W+P VKDWRLNERHYG   G  K +    +G++ V LW  SYD+ PP +  D     + DRRY H+  E     IP TEC+KD   RVV YW+E I P +R+G+RVL+A H N ++ L++HLDGI D  IVG+ +P   P+VYE   D++PLR
Sbjct:    9 RRASPAPIMHKLVLIRHGESTWNLENRFTGWTDVDLTPTGIAQAIAAGRLLREEGWDFDLCFTSVLKRAIHTLWYVLDEMDRTWLPVVKDWRLNERHYGALQGLNKADMARQYGEQQVLLWRRSYDVPPPALQPDDPRGQRHDRRYAHLRPEQ----IPLTECLKDTVARVVPYWDEAIAPAIRAGRRVLIAAHGNSIRALIKHLDGISDADIVGLNIPNGVPLVYEFDDDLRPLR 240          
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match: A0A1G3ZHV3_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10 TaxID=1802433 RepID=A0A1G3ZHV3_9BACT)

HSP 1 Score: 251 bits (642), Expect = 2.540e-78
Identity = 113/227 (49.78%), Postives = 153/227 (67.40%), Query Frame = 2
Query:  224 HRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLR 904
            +++V +RHGES WN+++R  GWTDV L+EKG  EA  AG  L+REGF FD+ F S+LKR LKT  IV+DELD+LW+P  + WRLNERHYG   G  K E    +G E + +W  SYD+ PPP+ T    +P +D RY  V  E     +P TEC+KD   RV+ YWEE+I PVVR GK+V++  H N ++ L++HLD + ++ I+   +P   P+VYEL QD+KPLR
Sbjct:    2 YQLVLIRHGESVWNQENRFTGWTDVDLSEKGVIEAKAAGELLKREGFSFDIAFVSLLKRALKTLWIVLDELDELWIPMERSWRLNERHYGALQGLNKSETAAKYGDEKILIWRRSYDVPPPPLETSDERFPGNDPRYADVPKEE----LPLTECLKDTIERVIPYWEEKIAPVVRQGKKVVIMAHGNTIRALMKHLDQLSEEEILHTNIPTGIPLVYELDQDLKPLR 224          
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match: A0A350LK84_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Sutterella sp. TaxID=1981025 RepID=A0A350LK84_9BURK)

HSP 1 Score: 251 bits (640), Expect = 5.070e-78
Identity = 114/225 (50.67%), Postives = 155/225 (68.89%), Query Frame = 2
Query:  230 VVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLR 904
            VVF+RHGES WN ++R  GWTDV LTEKG+ EA  AG  +R  G EFD+ F+S+LKR ++T +I +DE D+L++P +KDWRLNERHYG   G  K E  + FG+E V +W  SYD+ PP ++ D   YP +D RY   +DE     +P TEC+KD   RV+ YW+E I P V+SG RVLVA H N L+ L++H+DG+ D+ IVG+ +P   P+VYE   +M+P+R
Sbjct:    4 VVFMRHGESQWNLENRFTGWTDVDLTEKGQAEARKAGALIREAGLEFDIAFTSVLKRAIRTLYIALDETDRLYLPVIKDWRLNERHYGALQGLNKAETAKKFGEEQVHVWRRSYDVPPPALTKDDPRYPGNDPRYA-FLDE---AQLPLTECLKDTVDRVIPYWKETIEPAVKSGMRVLVAAHGNSLRALIKHIDGMTDEAIVGLNIPTGRPLVYEFDDEMRPIR 224          
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match: K1Y1M5_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=uncultured bacterium TaxID=77133 RepID=K1Y1M5_9BACT)

HSP 1 Score: 249 bits (637), Expect = 1.430e-77
Identity = 109/228 (47.81%), Postives = 159/228 (69.74%), Query Frame = 2
Query:  224 HRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLRS 907
            ++VV LRHGESTWN+++R  GWTDV L+E G +EA NAG  L++EG+ FDV ++S+LKR ++T  + +D +D +W+P  ++WRLNERHYG   G  K E    FG++ V +W  SYDI P P++TD   YP  D RY  + ++     +P+TEC+KD   R + YWE+ I P V+SGK+VL+A H N L+ L+++LD I DD IV + +P A P+VYEL +++KP++S
Sbjct:    2 YKVVLLRHGESTWNKENRFTGWTDVDLSETGIKEATNAGLTLKKEGYTFDVAYTSVLKRAIRTLWLTLDTMDLMWIPVYRNWRLNERHYGALQGMNKSETAAKFGEDQVLVWRRSYDIPPNPLTTDDPRYPGKDPRYSDLTEKT----LPKTECLKDTVARFIPYWEDTIAPAVKSGKKVLIAAHGNSLRALVKYLDNISDDEIVKLNIPTAVPLVYELDKNLKPIKS 225          
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match: A0A3D4UJ80_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A3D4UJ80_9BACT)

HSP 1 Score: 249 bits (637), Expect = 1.430e-77
Identity = 108/226 (47.79%), Postives = 155/226 (68.58%), Query Frame = 2
Query:  224 HRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPL 901
            H +V +RHGES WN+++R  GW DVPL+++G EEA NAGR L  EGFEFD+ ++S+LKR + T   +M+E+D +W+P +++W+LNERHYG   G  K E     G++ V +W  SYD  PP + T    +P  DRRY  +   +    IP TEC+KD   RVV YWE+EI P +++GKR+LVA H N L+ L++HLDGI DD IVG+ +P   P++Y+L +++KP+
Sbjct:    2 HTLVLIRHGESVWNKENRFTGWKDVPLSDRGHEEATNAGRLLLDEGFEFDIAYTSVLKRAIGTLWHIMEEMDLMWLPVIRNWKLNERHYGALQGLNKAETAAQHGEDQVLIWRRSYDTPPPALETSDKRWPGHDRRYADLAPSD----IPTTECLKDTVERVVPYWEQEIAPKIKAGKRILVAAHGNSLRALVKHLDGISDDDIVGVNIPTGMPLIYKLDENLKPI 223          
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match: A0A7V4AR64_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V4AR64_9BACT)

HSP 1 Score: 249 bits (636), Expect = 2.020e-77
Identity = 111/227 (48.90%), Postives = 152/227 (66.96%), Query Frame = 2
Query:  227 RVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLRS 907
            ++V +RHGES WN+++R  GWTDV L+EKG  EA  AGR L+ EG+EFD+ ++S+LKR ++T  +V+DE+D +W+P +  WRLNERHYG   G  K E    +G++ V +W  SYDI PP +      YP  DRRYR +  E     +P TEC+KD   R +  W E I P V+SGKRVL+A H N L+ L+++LDGI D  IVG+ +P   P+VYEL  D+KP+RS
Sbjct:    3 KLVLIRHGESEWNKENRFTGWTDVDLSEKGLREAREAGRLLKEEGYEFDIAYTSVLKRAIRTLWLVLDEMDLMWIPIINSWRLNERHYGALQGLNKAEMAAKYGEDQVLIWRRSYDIRPPALDPSDERYPGHDRRYRDLTPEQ----LPLTECLKDTVERFLPLWHETIAPTVKSGKRVLIAAHGNSLRALVKYLDGISDQDIVGLNIPTGIPLVYELEDDLKPIRS 225          
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match: A0A1J4SB84_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Candidatus Desantisbacteria bacterium CG1_02_38_46 TaxID=1817893 RepID=A0A1J4SB84_9BACT)

HSP 1 Score: 248 bits (634), Expect = 4.050e-77
Identity = 114/227 (50.22%), Postives = 155/227 (68.28%), Query Frame = 2
Query:  227 RVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLRS 907
            ++V LRHGES WN+++R  GWTDV L+EKG +EA  AG  L+ EGF FDV F+S+LKR ++T  IV+DE+D +W+P    WRLNERHYG   G  K E  E FG+E V +W  SYDI PP +      YP +D RY+ + DE G   IP TEC+KD   R + YW E I PVV+SGK+V++A H N L+ L+++LD + DD IV + +P   P+VYEL +D+KP+++
Sbjct:    3 KLVLLRHGESEWNKENRFTGWTDVDLSEKGIQEAKKAGDVLKSEGFIFDVAFTSVLKRAIRTLWIVLDEMDLMWIPVYNSWRLNERHYGALQGLNKSEMAEKFGEEQVLIWRRSYDIQPPALEKTDERYPGNDPRYKDL-DEKG---IPLTECLKDTVARFLPYWHENIAPVVKSGKKVIIAAHGNSLRALVKYLDNVPDDKIVSLNIPTGIPLVYELDEDLKPIKN 225          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIM7_ECTSI3.030e-17089.47Phosphoglycerate mutase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1C7HIQ3_9BURK6.560e-7950.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A7C5ENZ6_9DELT8.980e-7951.542,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A554WS00_9BURK1.070e-7848.732,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A1G3ZHV3_9BACT2.540e-7849.782,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A350LK84_9BURK5.070e-7850.672,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
K1Y1M5_9BACT1.430e-7747.812,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A3D4UJ80_9BACT1.430e-7747.792,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A7V4AR64_9BACT2.020e-7748.902,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A1J4SB84_9BACT4.050e-7750.222,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig54contigL-elsbetiae_contig54:23262..30087 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score488.8
Seed ortholog evalue1.9e-135
Seed eggNOG ortholog2880.D7FIM7
KEGG rclassRC00536
KEGG koko:K01834
KEGG ReactionR01518
KEGG Pathwayko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230
KEGG ModuleM00001,M00002,M00003
Hectar predicted targeting categorychloroplast
EggNOG free text desc.regulation of pentose-phosphate shunt
EggNOG OGsCOG0588@1,KOG0235@2759
EC5.4.2.11
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Ec32 ortholog descriptionHistidine phosphatase superfamily, clade-1
Ec32 orthologEc-27_000330.1
Exons6
Model size1260
Cds size936
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig54.13615.1prot_L-elsbetiae_contig54.13615.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig54 23335..29836 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816563.7369695-UTR-L-elsbetiae_contig54:23261..233341622816563.7369695-UTR-L-elsbetiae_contig54:23261..23334Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig54 23262..23334 +
1691683650.0673964-UTR-L-elsbetiae_contig54:23261..233341691683650.0673964-UTR-L-elsbetiae_contig54:23261..23334Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig54 23262..23334 +
1622816563.8237782-UTR-L-elsbetiae_contig54:29836..300871622816563.8237782-UTR-L-elsbetiae_contig54:29836..30087Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig54 29837..30087 +
1691683650.145157-UTR-L-elsbetiae_contig54:29836..300871691683650.145157-UTR-L-elsbetiae_contig54:29836..30087Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig54 29837..30087 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816563.7482493-CDS-L-elsbetiae_contig54:23334..235541622816563.7482493-CDS-L-elsbetiae_contig54:23334..23554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig54 23335..23554 +
1691683650.081119-CDS-L-elsbetiae_contig54:23334..235541691683650.081119-CDS-L-elsbetiae_contig54:23334..23554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig54 23335..23554 +
1622816563.759137-CDS-L-elsbetiae_contig54:26183..262891622816563.759137-CDS-L-elsbetiae_contig54:26183..26289Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig54 26184..26289 +
1691683650.091505-CDS-L-elsbetiae_contig54:26183..262891691683650.091505-CDS-L-elsbetiae_contig54:26183..26289Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig54 26184..26289 +
1622816563.774729-CDS-L-elsbetiae_contig54:26829..269331622816563.774729-CDS-L-elsbetiae_contig54:26829..26933Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig54 26830..26933 +
1691683650.1014767-CDS-L-elsbetiae_contig54:26829..269331691683650.1014767-CDS-L-elsbetiae_contig54:26829..26933Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig54 26830..26933 +
1622816563.786298-CDS-L-elsbetiae_contig54:27757..278841622816563.786298-CDS-L-elsbetiae_contig54:27757..27884Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig54 27758..27884 +
1691683650.1113153-CDS-L-elsbetiae_contig54:27757..278841691683650.1113153-CDS-L-elsbetiae_contig54:27757..27884Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig54 27758..27884 +
1622816563.79891-CDS-L-elsbetiae_contig54:28700..288421622816563.79891-CDS-L-elsbetiae_contig54:28700..28842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig54 28701..28842 +
1691683650.126052-CDS-L-elsbetiae_contig54:28700..288421691683650.126052-CDS-L-elsbetiae_contig54:28700..28842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig54 28701..28842 +
1622816563.810709-CDS-L-elsbetiae_contig54:29599..298361622816563.810709-CDS-L-elsbetiae_contig54:29599..29836Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig54 29600..29836 +
1691683650.136297-CDS-L-elsbetiae_contig54:29599..298361691683650.136297-CDS-L-elsbetiae_contig54:29599..29836Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig54 29600..29836 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig54.13615.1

>prot_L-elsbetiae_contig54.13615.1 ID=prot_L-elsbetiae_contig54.13615.1|Name=mRNA_L-elsbetiae_contig54.13615.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=312bp
MCSVSYALVLGGISVAYAFVPAGLYQPRCQQATHLLHASSSREEGETGIA
HRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFD
VVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEA
EEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIP
RTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGID
DDVIVGMTVPRATPMVYELGQDMKPLRSPDPDTLLSAELLSVDGAPAGGV
LAAAAGEVNAF*
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mRNA from alignment at L-elsbetiae_contig54:23262..30087+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig54.13615.1 ID=mRNA_L-elsbetiae_contig54.13615.1|Name=mRNA_L-elsbetiae_contig54.13615.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6826bp|location=Sequence derived from alignment at L-elsbetiae_contig54:23262..30087+ (Laminarionema elsbetiae ELsaHSoW15)
GGTGGCTGACAGTCTCGCCGACTCGCCTTGTTTCCGCGTTGTGCGCAGCT GCTGCACACACTTTGACATCGAGATGTGCTCGGTATCGTATGCCCTCGTC TTGGGTGGGATATCAGTGGCCTATGCCTTTGTCCCGGCAGGCCTCTACCA GCCCAGATGTCAGCAGGCAACTCATCTATTGCATGCAAGCTCGAGTCGTG AAGAGGGAGAAACGGGCATCGCGCATCGCGTAGTGTTCCTACGCCATGGG GAGTCAACATGGAATAGAGATGATCGACATATAGGTTGGACCGGTAAGAT TCGTAATGGGAGCTACCTCTGTCGTGTGGGGTTGCTGCCCTTTTCTATAT CGTCTTGAACAGCAGTAGTACCGTAGGTGACACAAGATACCACACCCCCT GGACCGAATTTTAGCGGCGCTCGGGAATCTGCCAACGTTGGCAGGAGGGA AACACCTGCCACAAGATTGTTCCAACATTGTTCTTGCAGGTAGCCGCGTC TTTCATGCAGAAGGAAGAACGCAGAGTTTCCAGCCTTTAACCTAGTCAGT TTCCAGCCTTCAACCCTAAACCGGCCCAACCCAACCCTAAACCCTAACCC TAACCCTAACCCCAACCCTCACCCAACCTCCCAAGCTAGGTTGGTGTGCA TTTGTTAGGTTCTAGGTCGCTGTACCCGGTCAAAGAGCTTGACCGGGTCA AAGAGTTTGTTGGCAGGTGTTTCCCTCCTGCCAACGTTGGCAGATTCCCG AGCGCCGGAATTTTAGAGCTCCGTTACTCCGTAACGAAGACGGCGCCAGC ACCAAACGACAGATTTTCGAACAGCCCTCGACTAGGTTTTTCCTATGCCA CCCCTTCCGGCACTGACACCCTCTTCGTTACGGAGTAATGCAGCTCTAAA ATTCGGTCCGGGGGGTGTGGTATCTTGTGTCACCTACGGTAGTGTTGTTG GAATCGGCTTTCAAGGGGGCGCATACATACACGATTGGGGTTTTAGGGAG GCGCTTCCTGGGACGTAAAAAAACACAGGGCCTCCGTGTAGGCAGAGATT TAGAGGTCGAAAGCTCAGCTTGGAGGAAACGCTCCAAGCCAGGAGTTACA GGACGTGTGGATAGGTCCTTGGCTGCATTGTAGAACAAAAAAGCTAGGCT CAATCTTAATCTTTGCACGGCACTAACTCTCAGCGTCGCTTGACATTCGA CTGACTACATGTAGAAGAGCTCGGATGAGAGAGAAACACACGTGTTGAAC CTCCCACACAAACGACTCTTTTTTTTTTTGTCACAACATACGATCCCACG TAGCCCCCCCCAAATATTTTTGGAGGCAGACAAGAGAGCGTGATTTGCTC TTCTCTTGATCAGAGAGGCGAAGTCGGCTTGAGCGCCACAGAGTTGATCC CTAAATAGCCAGCCCGGTGTCTCTTCTATGCTTACATATCTCTACGGTCA CCCATTTTCAAGTGATTTGGTGCTCTCCTGAGGGTGCCGCTCACGATTGA GATCGCCTCCCAAGCTGCGAAATTGGGCTGAAAAAGACAGTCACTGCTGC TTCTGTCTAGCACCGGTCACTCAGCAGCTCTCCTCTTCTAGGACAAATGG CGGAATACAGACTCTTTGCGGACGTAGGACAAAGACATATTGAGGCCTCT TTCTCTTTTCGTTGGAATGGGTTGGGTGTGCGAGGAGCATCATCGGTTAC GATGAACATGACTGAGTGGATTCCGAGCAAAAACATCTGGGAGGGGACAC GAAAACAAAAATCCCGCTGCACTCAAACGCCTCCAATTTTGAATACAGTT TTTGTTTTTGATGGGGGCTGCAACACGTGTGGAGAGAGCCAGCCCGCAGA TCCACAGGACGATTTTTAGTGGTGTCGGGGCAGAGTCAGCTATAATCCAT CCACGAGGAAATTTTACACATCGGAAAGCATAGGGTCCCAGGTGTGCAGA ACACTTGTCAATAACGAAAACCGTCATGCAGGGCACTAACTACAGCTGCT CCTGTCTATCGCTGATCCCCTCCGTGCGTGTTCGAAGGCAGCTCTGATTT GACGCTCACAGAGCGATTCAGGATCTAAAACTCGCAACGACGCTAGTCAT GAGTAGTAGATATCCTCCTCTGTGGTTTGTTTCGTCTGGGATGGAATTTG TGGGCTCCAAGGGCTGGTGCACCTGCGAAGCGTGTGCCTCGACATGGCGG GGCTTTTGGTAGTTTTTTTGTTGTTTGCGTGTTTTCGTCTGCGAAGCCAC TTTAGCAGTTTGTGGAGGCTCTGAATCATTCGTGCTCCGCCGCTAGAGCA TCGATTCGATTCGTTTTTCGTGCTAAACACTCGACGAGTACCAGAGCAAT ATGCCTGAGCTTGCTGCGTCACAATATCTGGATTCAGCCGCGAGCACTTG TCAAGAAAAGAGCTCATTTCTGCGCCTCCTTGAAAATTATTCCAAATAGC ACTGACAGCAAAGTATACATTAGATACTCAAAAACGGAACCTAATCCACA TTTGAGATGGGACCCTGTGGGCTTCAACCGGTGTTCCATAGTGACGTATT ATTGGTCCGGCCGAGTAGAAAAACACCCGAAATATCCGAAGAATTCAACA TCTCCCCTGCAAAGCTTTGCCTGGTCAACCGACATGTATTCCGGGGAGAA ACCCGCCGTGGTGTCGTGATGCTGTCCTTCTTTCTTGCGGCCGGATGTTG TATGTACGTACGTTGGGATGTTGTATAGACGTCTACTCCAGCAGCAGGAG AAGGGAAGGCACTAGTGCCAGATACAAGAACTCCACATTTTCCTTCTCCT TCAGCCAGTATGTATGGACATGTGCGCCCATATATGTAGATGACTTTTTA CAATTCTGAAGAACGATATTGTATGTACCGTTACGCTAAATCCTCGGGAA AACTGAATGCCATGCGGCGCAGATGTCCCGCTCACGGAGAAGGGAGAGGA GGAAGCTCTCAATGCCGGGCGGGCGCTCCGAAGAGAAGGTTTCGAGTTCG ACGTGGTGTTCTCATCGATGCTGAAACGGTGAGGTTTCCGCTCTACTTGC CACGGCATTCATTTTTCCGGGACCACTCGGTACCGCATGCAGGTGTCGTC GTCTACCGTATTGCTAACCGACACGAAATACACAGTAGGCAATGCAGTCG TGAACTGCGGTTCTCCATCAACAAGATAAATAAACTACTACTGTTTTGTT TGCTTTAAATTTCCCTCTAGACTAGTTTGCATACGCTCTGATGACCGGGA ACGAGGATATTCACATGGCAGTCGCGCATGCCACCCTCCTGGAAAGTCGT GCGGCTCCGCTGTCTCTTGTTCCATGCCACAGCCCAGCAGGGACGATAAA TTGTGGATTATTCTGTTGACCTTCAGATACACCTTTCCGGATGCTCTTGC TTGCTGTAAAGAGAACCCGACCCATGCACATCTTCCGCTTAAAAAAAATA CTCCTATGTAATGCTTTTCACCACATGAACACGTCTGCCTTCTTTTACTT TTGTACCTGTCGACACGCACAAGACACACAACCATTATTATCTCTGGCGC TTTTCAACCCGTGCATAGGGTGCTGAAAACCGAGCACATCGTGATGGACG AGCTTGACCAGTTGTGGGTGCCCGAGGTCAAGGACTGGCGGCTAAACGAG CGCCACTACGGGGACTGCATAGGTCAGACAAGGCGTGATGTGCATGGTGC ACACCTCAAGCCGACCGAACCTAACGACCCCCTGTTCAGCTTATGTCATC GAATCGTGTTCCTCTCCATCCCCGGCTGCACTGCCAGCGAGTTTGCAAGC ACAAGGCACATAATTTCATCCCAAACCGGCCCACCCGAGGAACTACAAAG AATTGTTAGATCTTGTACATGTAACCGGGGGCGGTAAGAGAGGGATAATT GGTTCTACGACAGTCCCCCTAGAACGGCATCTTTTCACAGGCTGGACGTA AACGGCTAACGTTTAGAAAAAAGTCAATAAAAGGACAGCAGTAGCCACGC GTCTCGCCCTCCTGCACACTCAACTTCCGTACAGTATTGTAGCTCAGTGC GTCGTTTGCCACCGCGTTCTAGACGCCACATCGCTTGGAGTTCGCCGTAC ATGGGCACGCCGCGTGACCCTTCTGTTTCGCTCAGCCAGCTACAGTGAGG TCTTGGATATAGCCCCCGCTTCGCGGGAGCGTTGTCACTACTGTAGAATC GCGGTGCGACTTCTTTCTCGAGCATTGGCGGCACCGGTCGCAGCATTTTG TACGAAAGTGGTTGTCAATCTGAAACGAGGTTAAGGACACGGTCACCGCC GGCACCATCTGATCGCTCGCCCCGTTTCGTAGTCTTGTGGTTGTCGGATA GATGAAACAACGTTCGTGCGTCAACGCTGGTATGCGACCCCCCACCCCCC CTCCCCCGGTCTAAACGGCGCAGTTGAGGTGCCCACCTTCTAAGGTTGAC CATACCGCGATGGTTGTCAACGTTCTTACATATCTGCAACAATTAGGAAA GACGAAGCCCGAGGCGGAGGAAGCCTTCGGAAAGGAGAACGTGGCGCTTT GGGCGTCGAGCTACGACATTGCGCCGCCTCCGATGAGCACGGACGGGCTT TACTACCCCAAGGACGACAGAAGGTGCGATTTTGGCGCGCGTTCGTGTCA CTGCTTGGCCGCATACGTTTTCCAGCATCGCTCGCTCGTTAAAAAAATCA GAACATTCCTCTCAAATAGAGCCATCTTGTCCTAGTTACGTGTTTCGTAT ACCAGCGATACCACGTCGACTTTCCCTACTCTGTTCTCGTATGAAATGGG TGCGAAGGTTTAACTAGAAGGCTTTTACAGGTGAGCCCGCATGGTGTACC AAATGCGCTGCAAAGGGCGAAAATCAAAAGAGCCTTGATACTTGTGGCAC AACCTTCCCGTCTGAAAAAGGTTGGACATCAAGAAGTAGAGCTGGTCGAA GGGAGCTCAGCGAGTCAGGCGTAGAATAGGTATCATCATGGTCACTTGTG CGGAGCACATGTTCACGGAGCGAAGCCTGAAACGAGGAATAGGTCTCCTT TGAAAGTTCACGACAATGCTTCGGTCTGTGTTGGCAGAACTCGATGTTAG TGAAGCGCATACCATCGATGGTGCACAGCCACTGCAAGTTTCAACTCCGT TCGGAGTCTTATTTTACTAAATTAAATGAATACTAGTCGGTGCAGGGTCA TCAAAAGAAGAACCGACACGGAATAGGCTACCGAAACGCCGCCCTTGTAG ACGAAAAAAAAACTTAGAGCGGTCTCTCAAGTACAGAGAAATGCTTGGAC GTCAGTCAGCCTATGATATTATTGTTAGTCAGCCTATGGTATTAATGTTG CCGTTATTTTCGTTTTTCCAGTTTGCCTTTACGGCCCGCTCTCTCTTCTT TCGTTCTTGGGGCGCCTTCTTCGGCCGTTCGCCATAAAGGTACCGCCACG TCGTCGACGAGAACGGGGTCTGCGCGATCCCCAGGACTGAGTGCATGAAG GACGTCTCCCGCCGTGTGGTGGGGTACTGGGAGGAGGAGATAGTGCCGGT CGTGAGGAGCGGCAAGCGCGTGCTGGTAGCGGTGAGACTAGGCCTGCAAG TTTGTTGTTGTTGTTTCTTCACATTACTGTAGCTCGTATAATCGAGATTG CTAATTCCAAAGAATCCAGCTACTCACGGCCTTTGGTCACAGAAGTCCTA GAGCCATCAGAAGGTCCGAAAAAGACACACGCAGATACACCGGGCAAGGG TACACAAGGCCGAGGAGGTACACCTATGAATATTCCGGTAAAGAAAAACA TATATCCTACTGAACCACGCATCCACGAATCTCCATTCGACTACAGAACT ACGTTTCCCCCCCTGTTCACTATCAACCAATGCACGGTTGCCGGCTACAG CCAAATGACTGTCTGGAGTGCTGCCTATACAAAAATACACCCAGTAATTT GACTCAACTCAGTTTCTTTCGAATTGGTTTATTTGGGCCACCATGCTCGC CGACAGCCGCGTCTCGCTGTTGCCCTATCTTTTGGGTCATTGATATTCGG AGTGCTACACGCGGAGACCCTGTTTCTGGGCAGGGAGAGCGACACCTGGG GGACGGCTGGCAGCTAAATACCGAGTGGAAAACGTTGCGTGCTTCCGTTT TTCTCGGGTGTTGTTTTGGCGCTCAACTGAAACCTCTTCTTCTCTCCCCC GCGACTTCATCTCTGTCTCTCTCTCTCTCGCTCTCTCTCTTTCTCTCTCT CTCTTTGTCTCTGTCTCTCTCTTTCTCGCTCGCTCCCTCCCTCTAAATTG GCCTGGCTCTCTTTGGCGGGTGTGATGCTCGGTCGCAGGGCCACGCGAAC ATGCTCAAGACGTTGCTGCAGCACCTCGACGGCATCGACGACGACGTGAT CGTCGGAATGACGGTTCCTCGTGCCACCCCGATGGTGTACGAACTGGGCC AAGACATGAAGCCGCTGCGGTCACCCGACCCGGACACGCTGCTGAGCGCC GAACTCTTGTCCGTCGACGGCGCTCCCGCCGGCGGCGTGTTGGCGGCAGC GGCGGGAGAAGTGAACGCGTTCTAGTCTAGAGGGGTAGCCTAGTCTGTGG CAGGAATATTTGCGGTTTGAGGGTCTAGCCGCTGTCTAGACTATTATTAC TTCTTTTTTTATGCCGTAGTGACAAAGGAGATAGACACACGTGTCTGGTG TTGCTCTTCAAACGACCACATCGTCACACATAGTTTTAGTCACACGTATC GTGTAGATACATACATTTGCGTGATGCTCGGCGTGCACTGCGAGGACGGA ACAAAGCCAAATAGTATACCAGCTCT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig54:23262..30087+

>mRNA_L-elsbetiae_contig54.13615.1 ID=mRNA_L-elsbetiae_contig54.13615.1|Name=mRNA_L-elsbetiae_contig54.13615.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1872bp|location=Sequence derived from alignment at L-elsbetiae_contig54:23262..30087+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTGCTCGGTATCGTATGCCCTCGTCTTGGGTGGGATATCAGTGGCCTA
TGCCTTTGTCCCGGCAGGCCTCTACCAGCCCAGATGTCAGCAGGCAACTC
ATCTATTGCATGCAAGCTCGAGTCGTGAAGAGGGAGAAACGGGCATCGCG
CATCGCGTAGTGTTCCTACGCCATGGGGAGTCAACATGGAATAGAGATGA
TCGACATATAGGTTGGACCGATGTGCTCGGTATCGTATGCCCTCGTCTTG
GGTGGGATATCAGTGGCCTATGCCTTTGTCCCGGCAGGCCTCTACCAGCC
CAGATGTCAGCAGGCAACTCATCTATTGCATGCAAGCTCGAGTCGTGAAG
AGGGAGAAACGGGCATCGCGCATCGCGTAGTGTTCCTACGCCATGGGGAG
TCAACATGGAATAGAGATGATCGACATATAGGTTGGACCGATGTCCCGCT
CACGGAGAAGGGAGAGGAGGAAGCTCTCAATGCCGGGCGGGCGCTCCGAA
GAGAAGGTTTCGAGTTCGACGTGGTGTTCTCATCGATGCTGAAACGATGT
CCCGCTCACGGAGAAGGGAGAGGAGGAAGCTCTCAATGCCGGGCGGGCGC
TCCGAAGAGAAGGTTTCGAGTTCGACGTGGTGTTCTCATCGATGCTGAAA
CGGGTGCTGAAAACCGAGCACATCGTGATGGACGAGCTTGACCAGTTGTG
GGTGCCCGAGGTCAAGGACTGGCGGCTAAACGAGCGCCACTACGGGGACT
GCATAGGGTGCTGAAAACCGAGCACATCGTGATGGACGAGCTTGACCAGT
TGTGGGTGCCCGAGGTCAAGGACTGGCGGCTAAACGAGCGCCACTACGGG
GACTGCATAGGAAAGACGAAGCCCGAGGCGGAGGAAGCCTTCGGAAAGGA
GAACGTGGCGCTTTGGGCGTCGAGCTACGACATTGCGCCGCCTCCGATGA
GCACGGACGGGCTTTACTACCCCAAGGACGACAGAAGGAAAGACGAAGCC
CGAGGCGGAGGAAGCCTTCGGAAAGGAGAACGTGGCGCTTTGGGCGTCGA
GCTACGACATTGCGCCGCCTCCGATGAGCACGGACGGGCTTTACTACCCC
AAGGACGACAGAAGGTACCGCCACGTCGTCGACGAGAACGGGGTCTGCGC
GATCCCCAGGACTGAGTGCATGAAGGACGTCTCCCGCCGTGTGGTGGGGT
ACTGGGAGGAGGAGATAGTGCCGGTCGTGAGGAGCGGCAAGCGCGTGCTG
GTAGCGGTACCGCCACGTCGTCGACGAGAACGGGGTCTGCGCGATCCCCA
GGACTGAGTGCATGAAGGACGTCTCCCGCCGTGTGGTGGGGTACTGGGAG
GAGGAGATAGTGCCGGTCGTGAGGAGCGGCAAGCGCGTGCTGGTAGCGGG
CCACGCGAACATGCTCAAGACGTTGCTGCAGCACCTCGACGGCATCGACG
ACGACGTGATCGTCGGAATGACGGTTCCTCGTGCCACCCCGATGGTGTAC
GAACTGGGCCAAGACATGAAGCCGCTGCGGTCACCCGACCCGGACACGCT
GCTGAGCGCCGAACTCTTGTCCGTCGACGGCGCTCCCGCCGGCGGCGTGT
TGGCGGCAGCGGCGGGAGAAGTGAACGCGTTCTAGGGCCACGCGAACATG
CTCAAGACGTTGCTGCAGCACCTCGACGGCATCGACGACGACGTGATCGT
CGGAATGACGGTTCCTCGTGCCACCCCGATGGTGTACGAACTGGGCCAAG
ACATGAAGCCGCTGCGGTCACCCGACCCGGACACGCTGCTGAGCGCCGAA
CTCTTGTCCGTCGACGGCGCTCCCGCCGGCGGCGTGTTGGCGGCAGCGGC
GGGAGAAGTGAACGCGTTCTAG
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