Homology
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match:
D7FIM7_ECTSI (Phosphoglycerate mutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM7_ECTSI)
HSP 1 Score: 486 bits (1252), Expect = 3.030e-170
Identity = 238/266 (89.47%), Postives = 250/266 (93.98%), Query Frame = 2
Query: 209 ETGIAHRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLRSPDPDTLLSAELLSVDGAPAGGVLAAAAGEVNAF 1006
ET +HRVVFLRHGESTWNRDDRHIGWTDVPLTEKGE EAL AGRALR+EGFEFDVVF+S+LKRVLKTEHIVMDELDQLWVPE+KD+RLNERHYGDCIGKTKPEAEEAFGKENVALWASSYD+AP PMSTDGLYYPKDDRRY+HVVDE+G CAIPRTECMKDVSRRVVGYWEEEI PVVRSGKRVLVAGHANMLKTLLQHLDGI DDVIV M VPRATP+VY+LG DMKPLRSP PDTLLSAELLSVDGAPA +AAA GEVNAF
Sbjct: 17 ETTTSHRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYQHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVTMKVPRATPIVYDLGADMKPLRSPLPDTLLSAELLSVDGAPAR--MAAADGEVNAF 280
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match:
A0A1C7HIQ3_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A1C7HIQ3_9BURK)
HSP 1 Score: 253 bits (646), Expect = 6.560e-79
Identity = 114/228 (50.00%), Postives = 158/228 (69.30%), Query Frame = 2
Query: 224 HRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLRS 907
+++V +RHGES WN ++R GW DV LTEKG +EA AG+ L+++GF FD+ ++S+LKR ++T I +DELDQL++P +KDWRLNERHYG G K E E FG E V +W SYD+ PP +S + +P + RYR E +P TEC+KD +RVV YWE EIVP +R GK++L+ H N L+ L++HLD I D IVG+ +P TP+VYEL ++MKP++S
Sbjct: 2 YKIVLMRHGESQWNLENRFTGWVDVDLTEKGRKEAALAGQLLKKQGFVFDLCYTSVLKRAIRTLCIALDELDQLYLPVIKDWRLNERHYGALQGLNKKETAEKFGNEQVMIWRRSYDVPPPALSKESPMWPANQSRYRLEDPE----LMPLTECLKDTVKRVVPYWENEIVPKIREGKQILITAHGNSLRALIKHLDNISDADIVGLNIPTGTPLVYELDENMKPIKS 225
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match:
A0A7C5ENZ6_9DELT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Desulfobacca acetoxidans TaxID=60893 RepID=A0A7C5ENZ6_9DELT)
HSP 1 Score: 253 bits (645), Expect = 8.980e-79
Identity = 117/227 (51.54%), Postives = 154/227 (67.84%), Query Frame = 2
Query: 224 HRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLR 904
+++V LRHGES WNR++R GW DV L+EKG EEAL AGR L REGF FDV F+S+LKR +KT +V++E+D +W+P WRLNERHYG G K E E G E V +W SYD+ PPP++ D YYP D RY +V E +P +EC+KDV R + YW E + P V+SG+RV++A H N L+ L+++LD I D IV + +P P+VYEL QD+KPLR
Sbjct: 2 YKLVLLRHGESVWNRENRFTGWIDVGLSEKGVEEALEAGRVLAREGFVFDVAFTSVLKRAIKTLWLVLEEMDLMWIPIHHSWRLNERHYGALQGLNKVETVERHGMEQVKIWRRSYDVPPPPLTPDSPYYPGRDPRYANVPKEE----LPLSECLKDVVARFLPYWHETLAPAVKSGQRVIIAAHGNSLRALVKYLDNISDADIVELNIPTGIPLVYELDQDLKPLR 224
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match:
A0A554WS00_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=5 Tax=Burkholderiales TaxID=80840 RepID=A0A554WS00_9BURK)
HSP 1 Score: 253 bits (646), Expect = 1.070e-78
Identity = 115/236 (48.73%), Postives = 155/236 (65.68%), Query Frame = 2
Query: 197 REEGETGIAHRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLR 904
R I H++V +RHGESTWN ++R GWTDV LT G +A+ AGR LR EG++FD+ F+S+LKR + T V+DE+D+ W+P VKDWRLNERHYG G K + +G++ V LW SYD+ PP + D + DRRY H+ E IP TEC+KD RVV YW+E I P +R+G+RVL+A H N ++ L++HLDGI D IVG+ +P P+VYE D++PLR
Sbjct: 9 RRASPAPIMHKLVLIRHGESTWNLENRFTGWTDVDLTPTGIAQAIAAGRLLREEGWDFDLCFTSVLKRAIHTLWYVLDEMDRTWLPVVKDWRLNERHYGALQGLNKADMARQYGEQQVLLWRRSYDVPPPALQPDDPRGQRHDRRYAHLRPEQ----IPLTECLKDTVARVVPYWDEAIAPAIRAGRRVLIAAHGNSIRALIKHLDGISDADIVGLNIPNGVPLVYEFDDDLRPLR 240
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match:
A0A1G3ZHV3_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10 TaxID=1802433 RepID=A0A1G3ZHV3_9BACT)
HSP 1 Score: 251 bits (642), Expect = 2.540e-78
Identity = 113/227 (49.78%), Postives = 153/227 (67.40%), Query Frame = 2
Query: 224 HRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLR 904
+++V +RHGES WN+++R GWTDV L+EKG EA AG L+REGF FD+ F S+LKR LKT IV+DELD+LW+P + WRLNERHYG G K E +G E + +W SYD+ PPP+ T +P +D RY V E +P TEC+KD RV+ YWEE+I PVVR GK+V++ H N ++ L++HLD + ++ I+ +P P+VYEL QD+KPLR
Sbjct: 2 YQLVLIRHGESVWNQENRFTGWTDVDLSEKGVIEAKAAGELLKREGFSFDIAFVSLLKRALKTLWIVLDELDELWIPMERSWRLNERHYGALQGLNKSETAAKYGDEKILIWRRSYDVPPPPLETSDERFPGNDPRYADVPKEE----LPLTECLKDTIERVIPYWEEKIAPVVRQGKKVVIMAHGNTIRALMKHLDQLSEEEILHTNIPTGIPLVYELDQDLKPLR 224
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match:
A0A350LK84_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Sutterella sp. TaxID=1981025 RepID=A0A350LK84_9BURK)
HSP 1 Score: 251 bits (640), Expect = 5.070e-78
Identity = 114/225 (50.67%), Postives = 155/225 (68.89%), Query Frame = 2
Query: 230 VVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLR 904
VVF+RHGES WN ++R GWTDV LTEKG+ EA AG +R G EFD+ F+S+LKR ++T +I +DE D+L++P +KDWRLNERHYG G K E + FG+E V +W SYD+ PP ++ D YP +D RY +DE +P TEC+KD RV+ YW+E I P V+SG RVLVA H N L+ L++H+DG+ D+ IVG+ +P P+VYE +M+P+R
Sbjct: 4 VVFMRHGESQWNLENRFTGWTDVDLTEKGQAEARKAGALIREAGLEFDIAFTSVLKRAIRTLYIALDETDRLYLPVIKDWRLNERHYGALQGLNKAETAKKFGEEQVHVWRRSYDVPPPALTKDDPRYPGNDPRYA-FLDE---AQLPLTECLKDTVDRVIPYWKETIEPAVKSGMRVLVAAHGNSLRALIKHIDGMTDEAIVGLNIPTGRPLVYEFDDEMRPIR 224
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match:
K1Y1M5_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=uncultured bacterium TaxID=77133 RepID=K1Y1M5_9BACT)
HSP 1 Score: 249 bits (637), Expect = 1.430e-77
Identity = 109/228 (47.81%), Postives = 159/228 (69.74%), Query Frame = 2
Query: 224 HRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLRS 907
++VV LRHGESTWN+++R GWTDV L+E G +EA NAG L++EG+ FDV ++S+LKR ++T + +D +D +W+P ++WRLNERHYG G K E FG++ V +W SYDI P P++TD YP D RY + ++ +P+TEC+KD R + YWE+ I P V+SGK+VL+A H N L+ L+++LD I DD IV + +P A P+VYEL +++KP++S
Sbjct: 2 YKVVLLRHGESTWNKENRFTGWTDVDLSETGIKEATNAGLTLKKEGYTFDVAYTSVLKRAIRTLWLTLDTMDLMWIPVYRNWRLNERHYGALQGMNKSETAAKFGEDQVLVWRRSYDIPPNPLTTDDPRYPGKDPRYSDLTEKT----LPKTECLKDTVARFIPYWEDTIAPAVKSGKKVLIAAHGNSLRALVKYLDNISDDEIVKLNIPTAVPLVYELDKNLKPIKS 225
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match:
A0A3D4UJ80_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A3D4UJ80_9BACT)
HSP 1 Score: 249 bits (637), Expect = 1.430e-77
Identity = 108/226 (47.79%), Postives = 155/226 (68.58%), Query Frame = 2
Query: 224 HRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPL 901
H +V +RHGES WN+++R GW DVPL+++G EEA NAGR L EGFEFD+ ++S+LKR + T +M+E+D +W+P +++W+LNERHYG G K E G++ V +W SYD PP + T +P DRRY + + IP TEC+KD RVV YWE+EI P +++GKR+LVA H N L+ L++HLDGI DD IVG+ +P P++Y+L +++KP+
Sbjct: 2 HTLVLIRHGESVWNKENRFTGWKDVPLSDRGHEEATNAGRLLLDEGFEFDIAYTSVLKRAIGTLWHIMEEMDLMWLPVIRNWKLNERHYGALQGLNKAETAAQHGEDQVLIWRRSYDTPPPALETSDKRWPGHDRRYADLAPSD----IPTTECLKDTVERVVPYWEQEIAPKIKAGKRILVAAHGNSLRALVKHLDGISDDDIVGVNIPTGMPLIYKLDENLKPI 223
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match:
A0A7V4AR64_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V4AR64_9BACT)
HSP 1 Score: 249 bits (636), Expect = 2.020e-77
Identity = 111/227 (48.90%), Postives = 152/227 (66.96%), Query Frame = 2
Query: 227 RVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLRS 907
++V +RHGES WN+++R GWTDV L+EKG EA AGR L+ EG+EFD+ ++S+LKR ++T +V+DE+D +W+P + WRLNERHYG G K E +G++ V +W SYDI PP + YP DRRYR + E +P TEC+KD R + W E I P V+SGKRVL+A H N L+ L+++LDGI D IVG+ +P P+VYEL D+KP+RS
Sbjct: 3 KLVLIRHGESEWNKENRFTGWTDVDLSEKGLREAREAGRLLKEEGYEFDIAYTSVLKRAIRTLWLVLDEMDLMWIPIINSWRLNERHYGALQGLNKAEMAAKYGEDQVLIWRRSYDIRPPALDPSDERYPGHDRRYRDLTPEQ----LPLTECLKDTVERFLPLWHETIAPTVKSGKRVLIAAHGNSLRALVKYLDGISDQDIVGLNIPTGIPLVYELEDDLKPIRS 225
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Match:
A0A1J4SB84_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Candidatus Desantisbacteria bacterium CG1_02_38_46 TaxID=1817893 RepID=A0A1J4SB84_9BACT)
HSP 1 Score: 248 bits (634), Expect = 4.050e-77
Identity = 114/227 (50.22%), Postives = 155/227 (68.28%), Query Frame = 2
Query: 227 RVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFDVVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIPRTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGIDDDVIVGMTVPRATPMVYELGQDMKPLRS 907
++V LRHGES WN+++R GWTDV L+EKG +EA AG L+ EGF FDV F+S+LKR ++T IV+DE+D +W+P WRLNERHYG G K E E FG+E V +W SYDI PP + YP +D RY+ + DE G IP TEC+KD R + YW E I PVV+SGK+V++A H N L+ L+++LD + DD IV + +P P+VYEL +D+KP+++
Sbjct: 3 KLVLLRHGESEWNKENRFTGWTDVDLSEKGIQEAKKAGDVLKSEGFIFDVAFTSVLKRAIRTLWIVLDEMDLMWIPVYNSWRLNERHYGALQGLNKSEMAEKFGEEQVLIWRRSYDIQPPALEKTDERYPGNDPRYKDL-DEKG---IPLTECLKDTVARFLPYWHENIAPVVKSGKKVIIAAHGNSLRALVKYLDNVPDDKIVSLNIPTGIPLVYELDEDLKPIKN 225
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig54.13615.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 3.03e-170 / Id = 89.47 Expect = 6.56e-79 / Id = 50.00 Expect = 8.98e-79 / Id = 51.54 Expect = 1.07e-78 / Id = 48.73 Expect = 2.54e-78 / Id = 49.78 Expect = 5.07e-78 / Id = 50.67 Expect = 1.43e-77 / Id = 47.81 Expect = 1.43e-77 / Id = 47.79 Expect = 2.02e-77 / Id = 48.90 Expect = 4.05e-77 / Id = 50.22 Sequence D7FIM7_ECTSI A0A1C7HIQ3_9BURK A0A7C5ENZ6_9DELT A0A554WS00_9BURK A0A1G3ZHV3_9BACT A0A350LK84_9BURK K1Y1M5_9BACT A0A3D4UJ80_9BACT A0A7V4AR64_9BACT A0A1J4SB84_9BACT
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 488.8
Seed ortholog evalue 1.9e-135
Seed eggNOG ortholog 2880.D7FIM7
KEGG rclass RC00536
KEGG ko ko:K01834
KEGG Reaction R01518
KEGG Pathway ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230
KEGG Module M00001,M00002,M00003
Hectar predicted targeting category chloroplast
EggNOG free text desc. regulation of pentose-phosphate shunt
EggNOG OGs COG0588@1,KOG0235@2759
EC 5.4.2.11
COG Functional cat. G
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Ec32 ortholog description Histidine phosphatase superfamily, clade-1
Ec32 ortholog Ec-27_000330.1
Exons 6
Model size 1260
Cds size 936
Stop 1
Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622816563.7369695-UTR-L-elsbetiae_contig54:23261..23334 1622816563.7369695-UTR-L-elsbetiae_contig54:23261..23334 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig54 23262..23334 +
1691683650.0673964-UTR-L-elsbetiae_contig54:23261..23334 1691683650.0673964-UTR-L-elsbetiae_contig54:23261..23334 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig54 23262..23334 +
1622816563.8237782-UTR-L-elsbetiae_contig54:29836..30087 1622816563.8237782-UTR-L-elsbetiae_contig54:29836..30087 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig54 29837..30087 +
1691683650.145157-UTR-L-elsbetiae_contig54:29836..30087 1691683650.145157-UTR-L-elsbetiae_contig54:29836..30087 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig54 29837..30087 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622816563.7482493-CDS-L-elsbetiae_contig54:23334..23554 1622816563.7482493-CDS-L-elsbetiae_contig54:23334..23554 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig54 23335..23554 +
1691683650.081119-CDS-L-elsbetiae_contig54:23334..23554 1691683650.081119-CDS-L-elsbetiae_contig54:23334..23554 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig54 23335..23554 +
1622816563.759137-CDS-L-elsbetiae_contig54:26183..26289 1622816563.759137-CDS-L-elsbetiae_contig54:26183..26289 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig54 26184..26289 +
1691683650.091505-CDS-L-elsbetiae_contig54:26183..26289 1691683650.091505-CDS-L-elsbetiae_contig54:26183..26289 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig54 26184..26289 +
1622816563.774729-CDS-L-elsbetiae_contig54:26829..26933 1622816563.774729-CDS-L-elsbetiae_contig54:26829..26933 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig54 26830..26933 +
1691683650.1014767-CDS-L-elsbetiae_contig54:26829..26933 1691683650.1014767-CDS-L-elsbetiae_contig54:26829..26933 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig54 26830..26933 +
1622816563.786298-CDS-L-elsbetiae_contig54:27757..27884 1622816563.786298-CDS-L-elsbetiae_contig54:27757..27884 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig54 27758..27884 +
1691683650.1113153-CDS-L-elsbetiae_contig54:27757..27884 1691683650.1113153-CDS-L-elsbetiae_contig54:27757..27884 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig54 27758..27884 +
1622816563.79891-CDS-L-elsbetiae_contig54:28700..28842 1622816563.79891-CDS-L-elsbetiae_contig54:28700..28842 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig54 28701..28842 +
1691683650.126052-CDS-L-elsbetiae_contig54:28700..28842 1691683650.126052-CDS-L-elsbetiae_contig54:28700..28842 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig54 28701..28842 +
1622816563.810709-CDS-L-elsbetiae_contig54:29599..29836 1622816563.810709-CDS-L-elsbetiae_contig54:29599..29836 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig54 29600..29836 +
1691683650.136297-CDS-L-elsbetiae_contig54:29599..29836 1691683650.136297-CDS-L-elsbetiae_contig54:29599..29836 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig54 29600..29836 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig54.13615.1
>prot_L-elsbetiae_contig54.13615.1 ID=prot_L-elsbetiae_contig54.13615.1|Name=mRNA_L-elsbetiae_contig54.13615.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=312bp
MCSVSYALVLGGISVAYAFVPAGLYQPRCQQATHLLHASSSREEGETGIA HRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEEEALNAGRALRREGFEFD VVFSSMLKRVLKTEHIVMDELDQLWVPEVKDWRLNERHYGDCIGKTKPEA EEAFGKENVALWASSYDIAPPPMSTDGLYYPKDDRRYRHVVDENGVCAIP RTECMKDVSRRVVGYWEEEIVPVVRSGKRVLVAGHANMLKTLLQHLDGID DDVIVGMTVPRATPMVYELGQDMKPLRSPDPDTLLSAELLSVDGAPAGGV LAAAAGEVNAF* back to top mRNA from alignment at L-elsbetiae_contig54:23262..30087+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig54.13615.1 ID=mRNA_L-elsbetiae_contig54.13615.1|Name=mRNA_L-elsbetiae_contig54.13615.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6826bp|location=Sequence derived from alignment at L-elsbetiae_contig54:23262..30087+ (Laminarionema elsbetiae ELsaHSoW15)GGTGGCTGACAGTCTCGCCGACTCGCCTTGTTTCCGCGTTGTGCGCAGCT
GCTGCACACACTTTGACATCGAG ATGTGCTCGGTATCGTATGCCCTCGTC
TTGGGTGGGATATCAGTGGCCTATGCCTTTGTCCCGGCAGGCCTCTACCA
GCCCAGATGTCAGCAGGCAACTCATCTATTGCATGCAAGCTCGAGTCGTG
AAGAGGGAGAAACGGGCATCGCGCATCGCGTAGTGTTCCTACGCCATGGG
GAGTCAACATGGAATAGAGATGATCGACATATAGGTTGGACCG GTAAGAT
TCGTAATGGGAGCTACCTCTGTCGTGTGGGGTTGCTGCCCTTTTCTATAT
CGTCTTGAACAGCAGTAGTACCGTAGGTGACACAAGATACCACACCCCCT
GGACCGAATTTTAGCGGCGCTCGGGAATCTGCCAACGTTGGCAGGAGGGA
AACACCTGCCACAAGATTGTTCCAACATTGTTCTTGCAGGTAGCCGCGTC
TTTCATGCAGAAGGAAGAACGCAGAGTTTCCAGCCTTTAACCTAGTCAGT
TTCCAGCCTTCAACCCTAAACCGGCCCAACCCAACCCTAAACCCTAACCC
TAACCCTAACCCCAACCCTCACCCAACCTCCCAAGCTAGGTTGGTGTGCA
TTTGTTAGGTTCTAGGTCGCTGTACCCGGTCAAAGAGCTTGACCGGGTCA
AAGAGTTTGTTGGCAGGTGTTTCCCTCCTGCCAACGTTGGCAGATTCCCG
AGCGCCGGAATTTTAGAGCTCCGTTACTCCGTAACGAAGACGGCGCCAGC
ACCAAACGACAGATTTTCGAACAGCCCTCGACTAGGTTTTTCCTATGCCA
CCCCTTCCGGCACTGACACCCTCTTCGTTACGGAGTAATGCAGCTCTAAA
ATTCGGTCCGGGGGGTGTGGTATCTTGTGTCACCTACGGTAGTGTTGTTG
GAATCGGCTTTCAAGGGGGCGCATACATACACGATTGGGGTTTTAGGGAG
GCGCTTCCTGGGACGTAAAAAAACACAGGGCCTCCGTGTAGGCAGAGATT
TAGAGGTCGAAAGCTCAGCTTGGAGGAAACGCTCCAAGCCAGGAGTTACA
GGACGTGTGGATAGGTCCTTGGCTGCATTGTAGAACAAAAAAGCTAGGCT
CAATCTTAATCTTTGCACGGCACTAACTCTCAGCGTCGCTTGACATTCGA
CTGACTACATGTAGAAGAGCTCGGATGAGAGAGAAACACACGTGTTGAAC
CTCCCACACAAACGACTCTTTTTTTTTTTGTCACAACATACGATCCCACG
TAGCCCCCCCCAAATATTTTTGGAGGCAGACAAGAGAGCGTGATTTGCTC
TTCTCTTGATCAGAGAGGCGAAGTCGGCTTGAGCGCCACAGAGTTGATCC
CTAAATAGCCAGCCCGGTGTCTCTTCTATGCTTACATATCTCTACGGTCA
CCCATTTTCAAGTGATTTGGTGCTCTCCTGAGGGTGCCGCTCACGATTGA
GATCGCCTCCCAAGCTGCGAAATTGGGCTGAAAAAGACAGTCACTGCTGC
TTCTGTCTAGCACCGGTCACTCAGCAGCTCTCCTCTTCTAGGACAAATGG
CGGAATACAGACTCTTTGCGGACGTAGGACAAAGACATATTGAGGCCTCT
TTCTCTTTTCGTTGGAATGGGTTGGGTGTGCGAGGAGCATCATCGGTTAC
GATGAACATGACTGAGTGGATTCCGAGCAAAAACATCTGGGAGGGGACAC
GAAAACAAAAATCCCGCTGCACTCAAACGCCTCCAATTTTGAATACAGTT
TTTGTTTTTGATGGGGGCTGCAACACGTGTGGAGAGAGCCAGCCCGCAGA
TCCACAGGACGATTTTTAGTGGTGTCGGGGCAGAGTCAGCTATAATCCAT
CCACGAGGAAATTTTACACATCGGAAAGCATAGGGTCCCAGGTGTGCAGA
ACACTTGTCAATAACGAAAACCGTCATGCAGGGCACTAACTACAGCTGCT
CCTGTCTATCGCTGATCCCCTCCGTGCGTGTTCGAAGGCAGCTCTGATTT
GACGCTCACAGAGCGATTCAGGATCTAAAACTCGCAACGACGCTAGTCAT
GAGTAGTAGATATCCTCCTCTGTGGTTTGTTTCGTCTGGGATGGAATTTG
TGGGCTCCAAGGGCTGGTGCACCTGCGAAGCGTGTGCCTCGACATGGCGG
GGCTTTTGGTAGTTTTTTTGTTGTTTGCGTGTTTTCGTCTGCGAAGCCAC
TTTAGCAGTTTGTGGAGGCTCTGAATCATTCGTGCTCCGCCGCTAGAGCA
TCGATTCGATTCGTTTTTCGTGCTAAACACTCGACGAGTACCAGAGCAAT
ATGCCTGAGCTTGCTGCGTCACAATATCTGGATTCAGCCGCGAGCACTTG
TCAAGAAAAGAGCTCATTTCTGCGCCTCCTTGAAAATTATTCCAAATAGC
ACTGACAGCAAAGTATACATTAGATACTCAAAAACGGAACCTAATCCACA
TTTGAGATGGGACCCTGTGGGCTTCAACCGGTGTTCCATAGTGACGTATT
ATTGGTCCGGCCGAGTAGAAAAACACCCGAAATATCCGAAGAATTCAACA
TCTCCCCTGCAAAGCTTTGCCTGGTCAACCGACATGTATTCCGGGGAGAA
ACCCGCCGTGGTGTCGTGATGCTGTCCTTCTTTCTTGCGGCCGGATGTTG
TATGTACGTACGTTGGGATGTTGTATAGACGTCTACTCCAGCAGCAGGAG
AAGGGAAGGCACTAGTGCCAGATACAAGAACTCCACATTTTCCTTCTCCT
TCAGCCAGTATGTATGGACATGTGCGCCCATATATGTAGATGACTTTTTA
CAATTCTGAAGAACGATATTGTATGTACCGTTACGCTAAATCCTCGGGAA
AACTGAATGCCATGCGGCGCAGATGTCCCGCTCACGGAGAAGGGAGAGGA
GGAAGCTCTCAATGCCGGGCGGGCGCTCCGAAGAGAAGGTTTCGAGTTCG
ACGTGGTGTTCTCATCGATGCTGAAACG GTGAGGTTTCCGCTCTACTTGC
CACGGCATTCATTTTTCCGGGACCACTCGGTACCGCATGCAGGTGTCGTC
GTCTACCGTATTGCTAACCGACACGAAATACACAGTAGGCAATGCAGTCG
TGAACTGCGGTTCTCCATCAACAAGATAAATAAACTACTACTGTTTTGTT
TGCTTTAAATTTCCCTCTAGACTAGTTTGCATACGCTCTGATGACCGGGA
ACGAGGATATTCACATGGCAGTCGCGCATGCCACCCTCCTGGAAAGTCGT
GCGGCTCCGCTGTCTCTTGTTCCATGCCACAGCCCAGCAGGGACGATAAA
TTGTGGATTATTCTGTTGACCTTCAGATACACCTTTCCGGATGCTCTTGC
TTGCTGTAAAGAGAACCCGACCCATGCACATCTTCCGCTTAAAAAAAATA
CTCCTATGTAATGCTTTTCACCACATGAACACGTCTGCCTTCTTTTACTT
TTGTACCTGTCGACACGCACAAGACACACAACCATTATTATCTCTGGCGC
TTTTCAACCCGTGCATAGGGTGCTGAAAACCGAGCACATCGTGATGGACG
AGCTTGACCAGTTGTGGGTGCCCGAGGTCAAGGACTGGCGGCTAAACGAG
CGCCACTACGGGGACTGCATAG GTCAGACAAGGCGTGATGTGCATGGTGC
ACACCTCAAGCCGACCGAACCTAACGACCCCCTGTTCAGCTTATGTCATC
GAATCGTGTTCCTCTCCATCCCCGGCTGCACTGCCAGCGAGTTTGCAAGC
ACAAGGCACATAATTTCATCCCAAACCGGCCCACCCGAGGAACTACAAAG
AATTGTTAGATCTTGTACATGTAACCGGGGGCGGTAAGAGAGGGATAATT
GGTTCTACGACAGTCCCCCTAGAACGGCATCTTTTCACAGGCTGGACGTA
AACGGCTAACGTTTAGAAAAAAGTCAATAAAAGGACAGCAGTAGCCACGC
GTCTCGCCCTCCTGCACACTCAACTTCCGTACAGTATTGTAGCTCAGTGC
GTCGTTTGCCACCGCGTTCTAGACGCCACATCGCTTGGAGTTCGCCGTAC
ATGGGCACGCCGCGTGACCCTTCTGTTTCGCTCAGCCAGCTACAGTGAGG
TCTTGGATATAGCCCCCGCTTCGCGGGAGCGTTGTCACTACTGTAGAATC
GCGGTGCGACTTCTTTCTCGAGCATTGGCGGCACCGGTCGCAGCATTTTG
TACGAAAGTGGTTGTCAATCTGAAACGAGGTTAAGGACACGGTCACCGCC
GGCACCATCTGATCGCTCGCCCCGTTTCGTAGTCTTGTGGTTGTCGGATA
GATGAAACAACGTTCGTGCGTCAACGCTGGTATGCGACCCCCCACCCCCC
CTCCCCCGGTCTAAACGGCGCAGTTGAGGTGCCCACCTTCTAAGGTTGAC
CATACCGCGATGGTTGTCAACGTTCTTACATATCTGCAACAATTAGGAAA
GACGAAGCCCGAGGCGGAGGAAGCCTTCGGAAAGGAGAACGTGGCGCTTT
GGGCGTCGAGCTACGACATTGCGCCGCCTCCGATGAGCACGGACGGGCTT
TACTACCCCAAGGACGACAGAAG GTGCGATTTTGGCGCGCGTTCGTGTCA
CTGCTTGGCCGCATACGTTTTCCAGCATCGCTCGCTCGTTAAAAAAATCA
GAACATTCCTCTCAAATAGAGCCATCTTGTCCTAGTTACGTGTTTCGTAT
ACCAGCGATACCACGTCGACTTTCCCTACTCTGTTCTCGTATGAAATGGG
TGCGAAGGTTTAACTAGAAGGCTTTTACAGGTGAGCCCGCATGGTGTACC
AAATGCGCTGCAAAGGGCGAAAATCAAAAGAGCCTTGATACTTGTGGCAC
AACCTTCCCGTCTGAAAAAGGTTGGACATCAAGAAGTAGAGCTGGTCGAA
GGGAGCTCAGCGAGTCAGGCGTAGAATAGGTATCATCATGGTCACTTGTG
CGGAGCACATGTTCACGGAGCGAAGCCTGAAACGAGGAATAGGTCTCCTT
TGAAAGTTCACGACAATGCTTCGGTCTGTGTTGGCAGAACTCGATGTTAG
TGAAGCGCATACCATCGATGGTGCACAGCCACTGCAAGTTTCAACTCCGT
TCGGAGTCTTATTTTACTAAATTAAATGAATACTAGTCGGTGCAGGGTCA
TCAAAAGAAGAACCGACACGGAATAGGCTACCGAAACGCCGCCCTTGTAG
ACGAAAAAAAAACTTAGAGCGGTCTCTCAAGTACAGAGAAATGCTTGGAC
GTCAGTCAGCCTATGATATTATTGTTAGTCAGCCTATGGTATTAATGTTG
CCGTTATTTTCGTTTTTCCAGTTTGCCTTTACGGCCCGCTCTCTCTTCTT
TCGTTCTTGGGGCGCCTTCTTCGGCCGTTCGCCATAAAGGTACCGCCACG
TCGTCGACGAGAACGGGGTCTGCGCGATCCCCAGGACTGAGTGCATGAAG
GACGTCTCCCGCCGTGTGGTGGGGTACTGGGAGGAGGAGATAGTGCCGGT
CGTGAGGAGCGGCAAGCGCGTGCTGGTAGCG GTGAGACTAGGCCTGCAAG
TTTGTTGTTGTTGTTTCTTCACATTACTGTAGCTCGTATAATCGAGATTG
CTAATTCCAAAGAATCCAGCTACTCACGGCCTTTGGTCACAGAAGTCCTA
GAGCCATCAGAAGGTCCGAAAAAGACACACGCAGATACACCGGGCAAGGG
TACACAAGGCCGAGGAGGTACACCTATGAATATTCCGGTAAAGAAAAACA
TATATCCTACTGAACCACGCATCCACGAATCTCCATTCGACTACAGAACT
ACGTTTCCCCCCCTGTTCACTATCAACCAATGCACGGTTGCCGGCTACAG
CCAAATGACTGTCTGGAGTGCTGCCTATACAAAAATACACCCAGTAATTT
GACTCAACTCAGTTTCTTTCGAATTGGTTTATTTGGGCCACCATGCTCGC
CGACAGCCGCGTCTCGCTGTTGCCCTATCTTTTGGGTCATTGATATTCGG
AGTGCTACACGCGGAGACCCTGTTTCTGGGCAGGGAGAGCGACACCTGGG
GGACGGCTGGCAGCTAAATACCGAGTGGAAAACGTTGCGTGCTTCCGTTT
TTCTCGGGTGTTGTTTTGGCGCTCAACTGAAACCTCTTCTTCTCTCCCCC
GCGACTTCATCTCTGTCTCTCTCTCTCTCGCTCTCTCTCTTTCTCTCTCT
CTCTTTGTCTCTGTCTCTCTCTTTCTCGCTCGCTCCCTCCCTCTAAATTG
GCCTGGCTCTCTTTGGCGGGTGTGATGCTCGGTCGCAGGGCCACGCGAAC
ATGCTCAAGACGTTGCTGCAGCACCTCGACGGCATCGACGACGACGTGAT
CGTCGGAATGACGGTTCCTCGTGCCACCCCGATGGTGTACGAACTGGGCC
AAGACATGAAGCCGCTGCGGTCACCCGACCCGGACACGCTGCTGAGCGCC
GAACTCTTGTCCGTCGACGGCGCTCCCGCCGGCGGCGTGTTGGCGGCAGC
GGCGGGAGAAGTGAACGCGTTCTAG TCTAGAGGGGTAGCCTAGTCTGTGG
CAGGAATATTTGCGGTTTGAGGGTCTAGCCGCTGTCTAGACTATTATTAC
TTCTTTTTTTATGCCGTAGTGACAAAGGAGATAGACACACGTGTCTGGTG
TTGCTCTTCAAACGACCACATCGTCACACATAGTTTTAGTCACACGTATC
GTGTAGATACATACATTTGCGTGATGCTCGGCGTGCACTGCGAGGACGGA
ACAAAGCCAAATAGTATACCAGCTCT back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig54:23262..30087+
>mRNA_L-elsbetiae_contig54.13615.1 ID=mRNA_L-elsbetiae_contig54.13615.1|Name=mRNA_L-elsbetiae_contig54.13615.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1872bp|location=Sequence derived from alignment at L-elsbetiae_contig54:23262..30087+ (Laminarionema elsbetiae ELsaHSoW15) ATGTGCTCGGTATCGTATGCCCTCGTCTTGGGTGGGATATCAGTGGCCTA TGCCTTTGTCCCGGCAGGCCTCTACCAGCCCAGATGTCAGCAGGCAACTC ATCTATTGCATGCAAGCTCGAGTCGTGAAGAGGGAGAAACGGGCATCGCG CATCGCGTAGTGTTCCTACGCCATGGGGAGTCAACATGGAATAGAGATGA TCGACATATAGGTTGGACCGATGTGCTCGGTATCGTATGCCCTCGTCTTG GGTGGGATATCAGTGGCCTATGCCTTTGTCCCGGCAGGCCTCTACCAGCC CAGATGTCAGCAGGCAACTCATCTATTGCATGCAAGCTCGAGTCGTGAAG AGGGAGAAACGGGCATCGCGCATCGCGTAGTGTTCCTACGCCATGGGGAG TCAACATGGAATAGAGATGATCGACATATAGGTTGGACCGATGTCCCGCT CACGGAGAAGGGAGAGGAGGAAGCTCTCAATGCCGGGCGGGCGCTCCGAA GAGAAGGTTTCGAGTTCGACGTGGTGTTCTCATCGATGCTGAAACGATGT CCCGCTCACGGAGAAGGGAGAGGAGGAAGCTCTCAATGCCGGGCGGGCGC TCCGAAGAGAAGGTTTCGAGTTCGACGTGGTGTTCTCATCGATGCTGAAA CGGGTGCTGAAAACCGAGCACATCGTGATGGACGAGCTTGACCAGTTGTG GGTGCCCGAGGTCAAGGACTGGCGGCTAAACGAGCGCCACTACGGGGACT GCATAGGGTGCTGAAAACCGAGCACATCGTGATGGACGAGCTTGACCAGT TGTGGGTGCCCGAGGTCAAGGACTGGCGGCTAAACGAGCGCCACTACGGG GACTGCATAGGAAAGACGAAGCCCGAGGCGGAGGAAGCCTTCGGAAAGGA GAACGTGGCGCTTTGGGCGTCGAGCTACGACATTGCGCCGCCTCCGATGA GCACGGACGGGCTTTACTACCCCAAGGACGACAGAAGGAAAGACGAAGCC CGAGGCGGAGGAAGCCTTCGGAAAGGAGAACGTGGCGCTTTGGGCGTCGA GCTACGACATTGCGCCGCCTCCGATGAGCACGGACGGGCTTTACTACCCC AAGGACGACAGAAGGTACCGCCACGTCGTCGACGAGAACGGGGTCTGCGC GATCCCCAGGACTGAGTGCATGAAGGACGTCTCCCGCCGTGTGGTGGGGT ACTGGGAGGAGGAGATAGTGCCGGTCGTGAGGAGCGGCAAGCGCGTGCTG GTAGCGGTACCGCCACGTCGTCGACGAGAACGGGGTCTGCGCGATCCCCA GGACTGAGTGCATGAAGGACGTCTCCCGCCGTGTGGTGGGGTACTGGGAG GAGGAGATAGTGCCGGTCGTGAGGAGCGGCAAGCGCGTGCTGGTAGCGGG CCACGCGAACATGCTCAAGACGTTGCTGCAGCACCTCGACGGCATCGACG ACGACGTGATCGTCGGAATGACGGTTCCTCGTGCCACCCCGATGGTGTAC GAACTGGGCCAAGACATGAAGCCGCTGCGGTCACCCGACCCGGACACGCT GCTGAGCGCCGAACTCTTGTCCGTCGACGGCGCTCCCGCCGGCGGCGTGT TGGCGGCAGCGGCGGGAGAAGTGAACGCGTTCTAGGGCCACGCGAACATG CTCAAGACGTTGCTGCAGCACCTCGACGGCATCGACGACGACGTGATCGT CGGAATGACGGTTCCTCGTGCCACCCCGATGGTGTACGAACTGGGCCAAG ACATGAAGCCGCTGCGGTCACCCGACCCGGACACGCTGCTGAGCGCCGAA CTCTTGTCCGTCGACGGCGCTCCCGCCGGCGGCGTGTTGGCGGCAGCGGC GGGAGAAGTGAACGCGTTCTAG back to top