Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 307 |
Cds size | 303 |
Stop | 1 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816561.9955091-CDS-L-elsbetiae_contig5388:4208..4511 | 1622816561.9955091-CDS-L-elsbetiae_contig5388:4208..4511 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5388 4209..4511 + |
1691683648.9473782-CDS-L-elsbetiae_contig5388:4208..4511 | 1691683648.9473782-CDS-L-elsbetiae_contig5388:4208..4511 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5388 4209..4511 + |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816562.0086868-UTR-L-elsbetiae_contig5388:4511..4514 | 1622816562.0086868-UTR-L-elsbetiae_contig5388:4511..4514 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5388 4512..4514 + |
1691683648.9559066-UTR-L-elsbetiae_contig5388:4511..4514 | 1691683648.9559066-UTR-L-elsbetiae_contig5388:4511..4514 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5388 4512..4514 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5388.13597.1 >prot_L-elsbetiae_contig5388.13597.1 ID=prot_L-elsbetiae_contig5388.13597.1|Name=mRNA_L-elsbetiae_contig5388.13597.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=101bp
TAHALVLSFFSHRRWHRSHGEHITLLSAREISIARSVKRRRCCCFYCLVS RRLCSRAGRGCYKRPVRLLRLNMRWVVSLRKYTLYQVARTLDLLVLHRRR * back to topmRNA from alignment at L-elsbetiae_contig5388:4209..4514+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5388.13597.1 ID=mRNA_L-elsbetiae_contig5388.13597.1|Name=mRNA_L-elsbetiae_contig5388.13597.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=306bp|location=Sequence derived from alignment at L-elsbetiae_contig5388:4209..4514+ (Laminarionema elsbetiae ELsaHSoW15) ACCGCCCATGCCCTCGTCCTCTCTTTCTTCTCCCACCGACGATGGCATAG
ATCTCACGGAGAACACATCACTTTGCTCTCTGCTCGGGAGATCAGTATTG
CTCGATCCGTCAAACGGCGTCGCTGCTGCTGCTTCTACTGCCTCGTCTCT
CGACGACTCTGCTCTAGGGCTGGCCGAGGATGCTACAAGCGGCCGGTTAG
GCTGTTGCGATTGAATATGCGGTGGGTCGTGTCCCTGCGCAAATACACCC
TCTACCAGGTTGCTCGGACCTTGGACCTGCTGGTGCTCCACCGCCGCCGT
TGACCC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5388:4209..4514+ >mRNA_L-elsbetiae_contig5388.13597.1 ID=mRNA_L-elsbetiae_contig5388.13597.1|Name=mRNA_L-elsbetiae_contig5388.13597.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=606bp|location=Sequence derived from alignment at L-elsbetiae_contig5388:4209..4514+ (Laminarionema elsbetiae ELsaHSoW15) ACCGCCCATGCCCTCGTCCTCTCTTTCTTCTCCCACCGACGATGGCATAG ATCTCACGGAGAACACATCACTTTGCTCTCTGCTCGGGAGATCAGTATTG CTCGATCCGTCAAACGGCGTCGCTGCTGCTGCTTCTACTGCCTCGTCTCT CGACGACTCTGCTCTAGGGCTGGCCGAGGATGCTACAAGCGGCCGGTTAG GCTGTTGCGATTGAATATGCGGTGGGTCGTGTCCCTGCGCAAATACACCC TCTACCAGGTTGCTCGGACCTTGGACCTGCTGGTGCTCCACCGCCGCCGT TGAACCGCCCATGCCCTCGTCCTCTCTTTCTTCTCCCACCGACGATGGCA TAGATCTCACGGAGAACACATCACTTTGCTCTCTGCTCGGGAGATCAGTA TTGCTCGATCCGTCAAACGGCGTCGCTGCTGCTGCTTCTACTGCCTCGTC TCTCGACGACTCTGCTCTAGGGCTGGCCGAGGATGCTACAAGCGGCCGGT TAGGCTGTTGCGATTGAATATGCGGTGGGTCGTGTCCCTGCGCAAATACA CCCTCTACCAGGTTGCTCGGACCTTGGACCTGCTGGTGCTCCACCGCCGC CGTTGA back to top
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