mRNA_L-elsbetiae_contig534.13515.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig534.13515.1 vs. uniprot
Match: A0A6H5L8T9_9PHAE (Protein YIPF n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8T9_9PHAE) HSP 1 Score: 317 bits (813), Expect = 2.270e-102 Identity = 179/250 (71.60%), Postives = 194/250 (77.60%), Query Frame = 3 Query: 27 ESKMMATEE---AGWD-----EGEEPLNGRAAGAVATKAGRGPPPP-QKISMCGLLSVQFYQPYFDVNTSEVKMRLLQAAWPVRKTSSSFLEEGESSQQADLYGPVWVSATLIFLISVAANARRGMTSDASAGEFSEVSTSAYCVLAYLAVGSAGLWAFFRAHDVPLSSSEALSVYGYSLTPFLAAAPLCLFSWPFRSSGLAMASLLAAIFVLRSSWPRLVEHMPEKSKGLLLAAVATYHVFSFLLLTVV 749 E KMMAT E AGWD G+ L PPPP KISMCGLLS+Q+YQPYFDV+TSEVK +LLQA WP+RKT+S FL EG+SS+ DLYGPVWV ATLIFL+SVA NARR MT DAS GEF +VSTSAY VLAYLA+G+ GLWAFFR H VPLS +EALSVYGYSLTPFLAAAPLCL SWPFRS GLA ASL+AAIFVLRSSWPRL EHMPEKS LLL AVATYHV FLLLTVV Sbjct: 46 ELKMMATVERDPAGWDPEDSQSGQNLLGKNGGXXXXXXXXXXPPPPGPKISMCGLLSLQYYQPYFDVDTSEVKTKLLQAIWPMRKTAS-FLGEGDSSK-VDLYGPVWVPATLIFLLSVAVNARRAMTDDASLGEFDDVSTSAYSVLAYLAIGTGGLWAFFRTHGVPLSFAEALSVYGYSLTPFLAAAPLCLLSWPFRSCGLAAASLVAAIFVLRSSWPRLQEHMPEKSMVLLLTAVATYHVLWFLLLTVV 293
BLAST of mRNA_L-elsbetiae_contig534.13515.1 vs. uniprot
Match: M4B6U3_HYAAE (Protein YIPF n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B6U3_HYAAE) HSP 1 Score: 95.1 bits (235), Expect = 2.630e-18 Identity = 74/215 (34.42%), Postives = 114/215 (53.02%), Query Frame = 3 Query: 108 ATKAGRGPPPPQKISMCGLLSVQFYQPYFDVNTSEVKMRLLQAAWPVRKTSSSFLEEGESSQQADLYGPVWVSATLIFLISVAANARR----GMTSDASAGEFSEVSTSAYCVLAYLAVGSAGL-WAFFRAHDVPLSSSEALSVYGYSLTPFLAAAPLCL-----FSWPFRSSGLAMASLLAAIFVLRSSWPRLVEHMPEKSKGLLLAAVATYHV 722 AT G P + +S+CG S+ FYQPYFDV+TS+V++RL+QA P+++ F E S D YGP+W+S TLIF ++ +N G D A +FS ++ SAY ++ +G L W + VP++ + +YGYS F+ AA LC+ W LAMA L F+L + W + EH+ ++ +LA ++ H+ Sbjct: 50 ATFGGDSKQPGRPVSLCGCFSLSFYQPYFDVDTSDVQLRLMQALLPLKR-EPVFAELAVKSP--DAYGPLWLSTTLIFCLASCSNVASFLDYGGNRDEWAYDFSRLA-SAYTLVEIFLLGLPMLIWLVGKYFQVPMTLLFLVCLYGYSSIMFIPAAILCISPIDAMDWVVML--LAMAWSL--FFLLNNLWRVISEHLTKEKMLPVLAVISGTHM 256
BLAST of mRNA_L-elsbetiae_contig534.13515.1 vs. uniprot
Match: A0A8J2SR10_9STRA (Protein YIPF n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SR10_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.870e-18 Identity = 79/244 (32.38%), Postives = 117/244 (47.95%), Query Frame = 3 Query: 36 MMATEEAGWDEGEEPLNGRAAGAVATKAGRGPPPPQKISMCGLLSVQFYQPYFDVNTSEVKMRLLQAAWPVRKTSSSFLEEGESSQQADLYGPVWVSATLIFLISVAANARRGMTSDASA---GEFSEVSTSAYCVLAYLAVGSAGLWAFF----RAHDVPLSSSEALSVYGYSLTPFLAAAPLCLF---SWPFRSSGLAMASLLAAIFVLRSSWPRLVEHMPEKSKGLLLAAVATYHVFSFLL 737 M ++ G + E+ L G+ AG A C LSV +Y+PYFDV+T EV RL A + + + L + D YGP WV+ TL+F ++V ++ R + ++A +FS V+ +A + Y+A+ +A WAF + H PL+ L V GYSL P+LAAAP C +WP + A SL F L+++ P + H EK A A +FLL Sbjct: 1 MRDEDDHGGPDDEDGLLGQNAGGAAP------------GYCACLSVAYYRPYFDVDTDEVAARLRAALFFCNEPFGATLRG-----KPDAYGPWWVATTLVFAVAVTSHVRGLLGAEAGVIYEFDFSAVTFAAATIYGYVALAAATNWAFLNYSLKVHQRPLA---CLCVVGYSLVPYLAAAPACALPYLAWPAVLAACAAQSL----FALKAARPAVEPHPREKVLAFAGATCALNAGLAFLL 220
BLAST of mRNA_L-elsbetiae_contig534.13515.1 vs. uniprot
Match: A0A8K1CS43_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CS43_PYTOL) HSP 1 Score: 93.2 bits (230), Expect = 1.300e-17 Identity = 64/197 (32.49%), Postives = 105/197 (53.30%), Query Frame = 3 Query: 147 ISMCGLLSVQFYQPYFDVNTSEVKMRLLQAAWPVRKTSSSFLEEGESSQQADLYGPVWVSATLIFLISVAANARRGMTSDASAGE----FSEVSTSAYCVLAYLAVGSAGLWAFFRAHDVPLSSSEALSVYGYSLTPFLAAAPLCLFSWPFRSSGLAMASLLAAI-FVLRSSWPRLVEHMPEKSKGLLLAAVATYHV 722 + MC S+ FYQPYFDV+TS+V+ RL++A P +K S SF E ++ D YGPVW+S TLIF ++ +N + + E FS V+++ V +L LW + ++P+ S + +YGYS T F+ A +C+ + + S+ ++ FVL + W + EH+ ++ LL +A H+ Sbjct: 66 MGMCSCFSLAFYQPYFDVDTSDVQERLVRALLPFKK-SPSFNEL--VTKAPDAYGPVWLSTTLIFCLASCSNVASYLDFEGDRKEWSYDFSRVASACTIVEIFLVALPVLLWLVGKYVNIPMRLSSLVCLYGYSTTIFIPATFICIAPIDAVDWVVILLSMSWSLYFVLANLWTAITEHLSKEKMLPLLGFIAASHL 259
BLAST of mRNA_L-elsbetiae_contig534.13515.1 vs. uniprot
Match: A0A0P1A6N6_PLAHL (Protein YIPF n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6N6_PLAHL) HSP 1 Score: 89.7 bits (221), Expect = 1.810e-16 Identity = 63/205 (30.73%), Postives = 107/205 (52.20%), Query Frame = 3 Query: 135 PPQKISMCGLLSVQFYQPYFDVNTSEVKMRLLQAAWPVRKTSSSFLEEGESSQQADLYGPVWVSATLIFLISVAANARRGMTSDASAGEFS---EVSTSAYCVLAYLAVG-SAGLWAFFRAHDVPLSSSEALSVYGYSLTPFLAAAPLCL-----FSWPFRSSGLAMASLLAAIFVLRSSWPRLVEHMPEKSKGLLLAAVATYHV 722 P + +CG ++ FYQPYFDV+TS+V+ R+++A P +K +F E + Q D YGP W+S+TLIF ++ +NA M + +A E+S SAY ++ +G +W + VP++ + +YGYS F+ AA LC+ W + A + F+L + W + EH+ ++ +LA ++ H+ Sbjct: 55 PARPPGLCGCFTLSFYQPYFDVDTSDVQQRIVRALLPFKK-EPAFAEL--ALQSPDAYGPFWLSSTLIFCLASCSNAASFMDYEGNADEWSYDFSRLASAYTLVEIFLLGLPISIWLVGKYFQVPMTLLFLVCLYGYSSIMFIPAAILCIAPVDAVDWVV----MLFAMTWSLFFLLTNLWHVISEHLTKEKMLPVLAVISGAHM 252
BLAST of mRNA_L-elsbetiae_contig534.13515.1 vs. uniprot
Match: A0A1V9ZA87_9STRA (Protein YIPF n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZA87_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.410e-16 Identity = 64/208 (30.77%), Postives = 106/208 (50.96%), Query Frame = 3 Query: 147 ISMCGLLSVQFYQPYFDVNTSEVKMRLLQAAWPVRKTSSSFLEEGESSQQADLYGPVWVSATLIFLISVAANARRGMTSDAS-----AGEFSEVSTSAYCVLAYLAVGSAGLWAFFRAHDVPLSSSEALSVYGYSL-----TPFLAAAPLCLFSWPFRSSGLAMASLLAAIFVLRSSWPRLVEHMPEKSKGLLLAAVATYHVFSFLLL 740 + +CG ++ FYQPYF+V+T ++++RL +A P +K S + + D YGP W+SATLIF ++ +N + + + +FS V+TS V YL LW+ + VPL S + +YGYS+ T F+ AP W +A + L F+L + W + E++P++ LL+ + T H+ +LL Sbjct: 57 LGLCGCFTLGFYQPYFNVDTVDIQVRLTRALIPFKKDPSF---KDLALTNPDAYGPFWISATLIFCMASCSNIASWLDYEGEDPSKWSYDFSYVATSMTMVGIYLLALPFALWSVGKYISVPLPLSFLVCLYGYSMVIFIPTMFVCTAPSDAADWVMMLFAMAWSLL----FLLSNMWGYIAEYLPKEKLLPLLSFIGTTHLIWVVLL 257
BLAST of mRNA_L-elsbetiae_contig534.13515.1 vs. uniprot
Match: A0A7S0SX75_9STRA (Protein YIPF (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SX75_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 4.340e-16 Identity = 65/219 (29.68%), Postives = 114/219 (52.05%), Query Frame = 3 Query: 78 PLNGRAAGAVATKA---GRGPPPPQKISMCGLLSVQFYQPYFDVNTSEVKMRLLQAAWPVRKTSSSFLEEGESSQQADLYGPVWVSATLIFLISVAANARRGMTSDASAG-----EFSEVSTSAYCVLAYLAVGSAGLWAFFRAHDVPLSSSEALSVYGYSLTPFLAAAPLCLF-----SWPFRSSGLAMASLLAAIFVLRSSWPRLVEHMPEKSKGLL 695 PL + AGA + + P + CG LS+ +YQP+FDV+T+++ RL A + R+ ++F++ S + D YGP W+S TL+F ++V ++ R G S AG +F + +++ + + + +W + +D + + VYGYSL F+ A+ LCLF SW L + + L+++F+LRS P ++ + + S LL Sbjct: 27 PLISKVAGAATQQLLGNNKSTKNPNDMPFCGCLSISYYQPFFDVDTTDIIKRLSLAVFYCRR-ETNFIDI--ISDKPDAYGPFWISTTLVFTLAVTSHIR-GWLSSWMAGTTWVYDFQSIISASSLIYGFASFVPFLVWIILKQYDGNVKLITMICVYGYSLFMFIPASLLCLFPSEVVSWLI----LLVTACLSSLFILRSLGPLIIASVKQDSIMLL 237
BLAST of mRNA_L-elsbetiae_contig534.13515.1 vs. uniprot
Match: H3GVJ5_PHYRM (Protein YIPF n=25 Tax=Phytophthora TaxID=4783 RepID=H3GVJ5_PHYRM) HSP 1 Score: 88.6 bits (218), Expect = 4.760e-16 Identity = 65/217 (29.95%), Postives = 110/217 (50.69%), Query Frame = 3 Query: 99 GAVATKAGRGPPPPQKISMCGLLSVQFYQPYFDVNTSEVKMRLLQAAWPVRKTSSSFLEEGESSQQADLYGPVWVSATLIFLISVAANARRGMTSDASAGEFS---EVSTSAYCVLAYLAVGSAGL-WAFFRAHDVPLSSSEALSVYGYSLTPFLAAAPLCL-----FSWPFRSSGLAMASLLAAIFVLRSSWPRLVEHMPEKSKGLLLAAVATYHV 722 G+ + G P + + +CG S+ FYQPYFDV+TS+V+ RL++A P +K +F E + + D YGP W+S TLIF ++ +N + + + E+S SAY ++ +G L W + VP++ + +YGYS F+ AA LC+ W + MA + F+L + W + EH+ ++ +LA ++ H+ Sbjct: 46 GSKSAAYGEDGKPARPMGLCGCFSLAFYQPYFDVDTSDVQQRLMRALVPFKK-DPTFAEL--ALKAPDAYGPFWLSTTLIFCLASCSNVASYLDYEGNTDEWSYDFSRLASAYTLVEIFLMGLPMLIWLVGKYFQVPMTLLFLVCLYGYSSIMFIPAAILCISPLDGMDWVV----MLMAMAWSLFFLLNNLWHVISEHLTKEKMLPVLAVISGAHM 255
BLAST of mRNA_L-elsbetiae_contig534.13515.1 vs. uniprot
Match: A0A662XNT8_9STRA (Protein YIPF n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XNT8_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 7.010e-16 Identity = 65/200 (32.50%), Postives = 111/200 (55.50%), Query Frame = 3 Query: 147 ISMCGLLSVQFYQPYFDVNTSEVKMRLLQAAWPVRKTSSSFLEEGESSQQADLYGPVWVSATLIFLISVAANARRGM--TSDAS--AGEFSEVSTSAYCVLAYLAVGSAGL-WAFFRAHDVPLSSSEALSVYGYSLTPFLAAAPLCLFSWPFRSSG---LAMASLLAAIFVLRSSWPRLVEHMPEKSKGLLLAAVATYHV 722 + MCG L++ +Y+PYFDV+T++V++RL++A P +K SF E +S D YGP W+S TLIF ++ +N + T D S + +FS ++ SAY ++ +G L W + VP++ + +YGYS+ F+ AA LC + P + L +A + F+L + W + EH+ ++ +LA + H+ Sbjct: 26 MGMCGCLTLAYYKPYFDVDTTDVQLRLMRALVPFKK-EPSFAELAMASP--DAYGPFWLSTTLIFCLASCSNVASFLDYTGDTSEWSYDFSRLA-SAYTLVEIFLLGLPVLIWLVGKYFQVPMTLLFLVCLYGYSMMMFIPAAILC--TIPIDAMDWVVLLLAMTWSLFFLLSNLWSVISEHLTKEKMLPVLAVIRYAHL 219
BLAST of mRNA_L-elsbetiae_contig534.13515.1 vs. uniprot
Match: A0A3F2RX72_9STRA (Protein YIPF n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RX72_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 2.220e-15 Identity = 58/205 (28.29%), Postives = 107/205 (52.20%), Query Frame = 3 Query: 135 PPQKISMCGLLSVQFYQPYFDVNTSEVKMRLLQAAWPVRKTSSSFLEEGESSQQADLYGPVWVSATLIFLISVAANARRGMTSDASAGE----FSEVSTSAYCVLAYLAVGSAGLWAFFRAHDVPLSSSEALSVYGYSLTPFLAAAPLCLF-----SWPFRSSGLAMASLLAAIFVLRSSWPRLVEHMPEKSKGLLLAAVATYHV 722 P + + +CG ++ +YQP FDV+T++V++RL++A P +K +F E + + D YGP W+S TLIF ++ +NA + + E FS ++++ V +L +W + VP++ + +YGYS+ F+ AA C+F W L +A + F+L + W + EH+ ++ +LA ++ H+ Sbjct: 59 PQRPMGLCGCFTLAYYQPLFDVDTTDVQLRLMRALVPFKK-EPTFAEL--ALKAPDAYGPFWLSTTLIFCLASCSNAASFLDYEGDMNEWSYDFSRLASACTLVEIFLLGLPTLIWLVGKYFQVPMTLLFLVCLYGYSMIMFIPAAIFCVFPADAVDWVV----LLLAMSWSLFFLLNNLWSVIAEHLTKEKMLPVLAVISASHM 256 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig534.13515.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig534.13515.1 >prot_L-elsbetiae_contig534.13515.1 ID=prot_L-elsbetiae_contig534.13515.1|Name=mRNA_L-elsbetiae_contig534.13515.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=239bp MMATEEAGWDEGEEPLNGRAAGAVATKAGRGPPPPQKISMCGLLSVQFYQback to top mRNA from alignment at L-elsbetiae_contig534:24439..27217+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig534.13515.1 ID=mRNA_L-elsbetiae_contig534.13515.1|Name=mRNA_L-elsbetiae_contig534.13515.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2779bp|location=Sequence derived from alignment at L-elsbetiae_contig534:24439..27217+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig534:24439..27217+ >mRNA_L-elsbetiae_contig534.13515.1 ID=mRNA_L-elsbetiae_contig534.13515.1|Name=mRNA_L-elsbetiae_contig534.13515.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1434bp|location=Sequence derived from alignment at L-elsbetiae_contig534:24439..27217+ (Laminarionema elsbetiae ELsaHSoW15)back to top |