mRNA_L-elsbetiae_contig5331.13501.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5331.13501.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE) HSP 1 Score: 196 bits (498), Expect = 4.020e-59 Identity = 97/108 (89.81%), Postives = 102/108 (94.44%), Query Frame = 1 Query: 295 LFFSKREVNKYNGKKLRDLDEPVARVSAVHTGANARRATADTAEGLERGLYLAKGTKVMLTKNLYQQVGLVNGIRGDVVELVFADDAPPPNLPLYVVVKFRGYSGGEW 618 LF+SK+EVNKYNGKKLR+LD PVARVSAVHTGANARRATADTAEGLER LYLAKG KVML+KNLYQQVGLVNGIRG+VVELV ADDAPPP LPLYVVVKF GYSGGEW Sbjct: 52 LFYSKKEVNKYNGKKLRELDNPVARVSAVHTGANARRATADTAEGLERDLYLAKGAKVMLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEW 159
BLAST of mRNA_L-elsbetiae_contig5331.13501.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE) HSP 1 Score: 209 bits (532), Expect = 7.200e-59 Identity = 104/118 (88.14%), Postives = 111/118 (94.07%), Query Frame = 1 Query: 265 QKAEFKDATRLFFSKREVNKYNGKKLRDLDEPVARVSAVHTGANARRATADTAEGLERGLYLAKGTKVMLTKNLYQQVGLVNGIRGDVVELVFADDAPPPNLPLYVVVKFRGYSGGEW 618 +KA F+DATRLF+SK+EVNKYNGKKLR+LD PVARVSAVHTGANARRATADTAEGLER LYLAKG KVML+KNLYQQVGLVNGIRG+VVELV ADDAPPP LPLYVVVKF GYSGGEW Sbjct: 1347 EKAAFEDATRLFYSKKEVNKYNGKKLRELDNPVARVSAVHTGANARRATADTAEGLERDLYLAKGAKVMLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEW 1464
BLAST of mRNA_L-elsbetiae_contig5331.13501.1 vs. uniprot
Match: A0A6H5J8Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y8_9PHAE) HSP 1 Score: 138 bits (348), Expect = 1.360e-34 Identity = 71/83 (85.54%), Postives = 77/83 (92.77%), Query Frame = 1 Query: 265 QKAEFKDATRLFFSKREVNKYNGKKLRDLDEPVARVSAVHTGANARRATADTAEGLERGLYLAKGTKVMLTKNLYQQVGLVNG 513 +KA F+DATRLF+SK+EVNKYNGKKLR+LD PVARVSAVHTGANARRATADTAEGLER LYLAKG KVML+KNLYQQVGL G Sbjct: 270 EKAAFEDATRLFYSKKEVNKYNGKKLRELDNPVARVSAVHTGANARRATADTAEGLERDLYLAKGAKVMLSKNLYQQVGLDGG 352
BLAST of mRNA_L-elsbetiae_contig5331.13501.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE) HSP 1 Score: 127 bits (320), Expect = 3.540e-31 Identity = 61/68 (89.71%), Postives = 63/68 (92.65%), Query Frame = 1 Query: 415 DTAEGLERGLYLAKGTKVMLTKNLYQQVGLVNGIRGDVVELVFADDAPPPNLPLYVVVKFRGYSGGEW 618 DTAEGLER LYLAKG KVML+KNLYQQVGLVNGIRG+VVELV ADDAPPP LPLYVVVKF GYSGGEW Sbjct: 266 DTAEGLERDLYLAKGAKVMLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEW 333
BLAST of mRNA_L-elsbetiae_contig5331.13501.1 vs. uniprot
Match: UPI001CF206B2 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF206B2) HSP 1 Score: 110 bits (276), Expect = 1.760e-25 Identity = 55/111 (49.55%), Postives = 78/111 (70.27%), Query Frame = 1 Query: 277 FKDATRLFFSKREVNKYNGKKLRDLDEPVARVSAVHTGANARRATADTAEGLERGLYLAKGTKVMLTKNLYQQVGLVNGIRGDVVELVFADDAPPPNLPLYVVVKFRGYSG 609 FKD RL++S EV KYN +KL L++P+AR++A H+ A++A+AD GLE ++LAKG +VMLT NL+ VGL NG G VV ++A + PP+LP+ V+VKF Y+G Sbjct: 123 FKDTVRLYYSNDEVAKYNFEKLSALNQPIARINARHSTEAAKKASADEMSGLEPVVFLAKGAQVMLTMNLWTDVGLCNGATGTVVNFIYATNQQPPDLPIAVIVKFDDYAG 233
BLAST of mRNA_L-elsbetiae_contig5331.13501.1 vs. uniprot
Match: UPI00109BC70A (uncharacterized protein LOC110236158 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BC70A) HSP 1 Score: 112 bits (281), Expect = 3.360e-25 Identity = 56/112 (50.00%), Postives = 75/112 (66.96%), Query Frame = 1 Query: 274 EFKDATRLFFSKREVNKYNGKKLRDLDEPVARVSAVHTGANARRATADTAEGLERGLYLAKGTKVMLTKNLYQQVGLVNGIRGDVVELVFADDAPPPNLPLYVVVKFRGYSG 609 EFKD TRLF+S EV KYN KL +L P+A++ A H+ A++ + GLE L+LAKG VMLT NL+ VGL NG +G V+++++ D PP+LP+ VVVKF YSG Sbjct: 1508 EFKDVTRLFYSNEEVGKYNFSKLEELKHPIAKIEARHSTIKAKKISPQELFGLEPLLFLAKGAVVMLTNNLWTSVGLCNGAKGTVMDIIYHPDHKPPSLPIAVVVKFESYSG 1619
BLAST of mRNA_L-elsbetiae_contig5331.13501.1 vs. uniprot
Match: A0A6S7LPR6_PARCT (Uncharacterized protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7LPR6_PARCT) HSP 1 Score: 107 bits (267), Expect = 2.380e-24 Identity = 53/113 (46.90%), Postives = 77/113 (68.14%), Query Frame = 1 Query: 271 AEFKDATRLFFSKREVNKYNGKKLRDLDEPVARVSAVHTGANARRATADTAEGLERGLYLAKGTKVMLTKNLYQQVGLVNGIRGDVVELVFADDAPPPNLPLYVVVKFRGYSG 609 +EF+DATRLF+S +V YN +L L++PVA ++A H+ A A++ ++ GLE ++LAKG KVMLT NL+ VGL NG G V++ +F + PP+LP+ VVV+F Y G Sbjct: 93 SEFEDATRLFYSNEQVANYNHDQLSKLEQPVAHINARHSSAIAKKIASEDMSGLEPVVFLAKGAKVMLTMNLWSNVGLCNGATGTVIDFIFESNHRPPDLPVGVVVQFDNYRG 205
BLAST of mRNA_L-elsbetiae_contig5331.13501.1 vs. uniprot
Match: UPI00109B989B (uncharacterized protein LOC110242621 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109B989B) HSP 1 Score: 108 bits (269), Expect = 2.560e-24 Identity = 51/113 (45.13%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 271 AEFKDATRLFFSKREVNKYNGKKLRDLDEPVARVSAVHTGANARRATADTAEGLERGLYLAKGTKVMLTKNLYQQVGLVNGIRGDVVELVFADDAPPPNLPLYVVVKFRGYSG 609 A+F +ATRLF+S EV+ YN ++L+ L +P A ++A H+ A+ +D GLE +YLAKG KVM T NL+ VGL NG G +V++++A + PP+LP+ V+V+F Y G Sbjct: 121 ADFNEATRLFYSNEEVSSYNFEQLKKLRQPCANINAPHSSVTAKNLPSDEMSGLEPTVYLAKGAKVMFTMNLWASVGLCNGATGTIVDIIYATNHQPPDLPIAVIVRFDDYRG 233
BLAST of mRNA_L-elsbetiae_contig5331.13501.1 vs. uniprot
Match: A0A2B4RQ91_STYPI (ATP-dependent DNA helicase n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RQ91_STYPI) HSP 1 Score: 107 bits (268), Expect = 1.790e-23 Identity = 53/112 (47.32%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 274 EFKDATRLFFSKREVNKYNGKKLRDLDEPVARVSAVHTGANARRATADTAEGLERGLYLAKGTKVMLTKNLYQQVGLVNGIRGDVVELVFADDAPPPNLPLYVVVKFRGYSG 609 EF+DATRL+FS EV YN +KL +L +P+A ++A H+ A++A++D GL+ ++LAKG VMLT NL+ VGL NG G V + ++A++ PP+LP+ V+VKF Y G Sbjct: 811 EFQDATRLYFSNEEVANYNFEKLSELHQPIACITARHSSDIAKKASSDDMSGLQPTIFLAKGAHVMLTMNLWIDVGLCNGATGTVEDFIYANNQQPPDLPVAVIVKFNEYRG 922
BLAST of mRNA_L-elsbetiae_contig5331.13501.1 vs. uniprot
Match: A0A2B4S669_STYPI (ATP-dependent DNA helicase n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4S669_STYPI) HSP 1 Score: 107 bits (268), Expect = 1.870e-23 Identity = 53/112 (47.32%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 274 EFKDATRLFFSKREVNKYNGKKLRDLDEPVARVSAVHTGANARRATADTAEGLERGLYLAKGTKVMLTKNLYQQVGLVNGIRGDVVELVFADDAPPPNLPLYVVVKFRGYSG 609 EF+DATRL+FS EV YN +KL +L +P+A ++A H+ A++A++D GL+ ++LAKG VMLT NL+ VGL NG G V + ++A++ PP+LP+ V+VKF Y G Sbjct: 1716 EFQDATRLYFSNEEVANYNFEKLSELHQPIACITARHSSDIAKKASSDDMSGLQPTIFLAKGAHVMLTMNLWIDVGLCNGATGTVEDFIYANNQQPPDLPVAVIVKFNEYRG 1827 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5331.13501.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5331.13501.1 >prot_L-elsbetiae_contig5331.13501.1 ID=prot_L-elsbetiae_contig5331.13501.1|Name=mRNA_L-elsbetiae_contig5331.13501.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=207bp MPPHPLSVQLPAVQEGQAEPEAVLLRQQHGSSERDRRAPTTDPDGGDAHRback to top mRNA from alignment at L-elsbetiae_contig5331:12089..12709+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5331.13501.1 ID=mRNA_L-elsbetiae_contig5331.13501.1|Name=mRNA_L-elsbetiae_contig5331.13501.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=621bp|location=Sequence derived from alignment at L-elsbetiae_contig5331:12089..12709+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5331:12089..12709+ >mRNA_L-elsbetiae_contig5331.13501.1 ID=mRNA_L-elsbetiae_contig5331.13501.1|Name=mRNA_L-elsbetiae_contig5331.13501.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1242bp|location=Sequence derived from alignment at L-elsbetiae_contig5331:12089..12709+ (Laminarionema elsbetiae ELsaHSoW15)back to top |