mRNA_L-elsbetiae_contig5331.13500.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5331.13500.1
Unique NamemRNA_L-elsbetiae_contig5331.13500.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5331.13500.1 vs. uniprot
Match: A0A6H5KKD9_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKD9_9PHAE)

HSP 1 Score: 337 bits (864), Expect = 3.710e-102
Identity = 182/233 (78.11%), Postives = 195/233 (83.69%), Query Frame = 1
Query:   97 WEGTVTAIMGPSGAGKTSLLNALAGRLPSAGR-GGGXXXXXXXGLTGTVRLDGEAVGAARVRTVSAYVTQEDVLPETLTCYEHLMFHAHLRLPAGTSLSRRRDRVMEVMRQLALVDIRDSRIGGDLARGISGGEKRRLSIGTELLTRPALLFADEPTTGLDSSTALRVMQLLSQVASLGTTVVCSVHQPRPEVVRLIDKVIVLSRGAVAFSGPPSDAGAHFASIGRPFPRLEA 792
            W GTVTAIMGPSGAGKTSLLNALAGRL    R   G       GLTG VRL+G A G A VR +SAYVTQEDVLPETLTCYEHLMFHA LRLP  T+L+RR DRV EV+ QL L  IRDSRIGG L+RGISGGEKRRLSIGTELLTRPALLF DEPTTGLDSSTA+RVM+L+S++ASLGTTVVCSVHQPRPEVVRLI KVI+LSRGAVAF G PSDA AHFA+IGRPF RL A
Sbjct: 1460 WGGTVTAIMGPSGAGKTSLLNALAGRLQDVQREASGGGRRRRPGLTGAVRLNGLAAGPAEVRALSAYVTQEDVLPETLTCYEHLMFHAQLRLPGHTTLARRHDRVAEVLEQLGLAGIRDSRIGGGLSRGISGGEKRRLSIGTELLTRPALLFLDEPTTGLDSSTAVRVMKLVSEIASLGTTVVCSVHQPRPEVVRLIHKVILLSRGAVAFCGAPSDAEAHFAAIGRPFSRLGA 1692          
BLAST of mRNA_L-elsbetiae_contig5331.13500.1 vs. uniprot
Match: A0A6H5KT00_9PHAE (ABC protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT00_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 2.320e-77
Identity = 151/259 (58.30%), Postives = 185/259 (71.43%), Query Frame = 1
Query:   64 GKGAPGDDADGWEGTVTAIMGPSGAGKTSLLNALAGRLPSAGR--GGGXXXXXXXGLTGTVRLDGEAVGAARVRTVSAYVTQEDVLPETLTCYEHLMFHAHLRLPAGTSLSR-------------------RRDRVMEVMRQLALVDIRDSRIGGDLARGISGGEKRRLSIGTELLTRPALLFADEPTTGLDSSTALRVMQLLSQVASL-GTTVVCSVHQPRPEVVRLIDKVIVLSRGAVAFSGPPSDAGAHFASIGRP 774
            G G+P   A  W G+VTAIMGPSGAGKT+LLN LAGR+   G    GG        +TG VR++G AV AA VR VS YVTQEDVLPETLTC+EHLMFHA LR+    +++R                   R+ RV++V+R+L L D+RDSRIGG L+RGISGGEKRRLSI TELLT P LLF DEPTTGLD+STAL  MQLLS +AS  G TV+CS+HQPRP+V   +D+V+++SRG+V+F GPP+   A+FAS+GRP
Sbjct: 1293 GNGSPFASAPVWSGSVTAIMGPSGAGKTTLLNVLAGRMRRLGNKNNGGR-------VTGAVRINGRAVTAAEVRGVSGYVTQEDVLPETLTCFEHLMFHAELRMSTPEAVTRGCGXXXXXXRRXXRASREDRKHRVLQVLRELRLEDVRDSRIGGGLSRGISGGEKRRLSIATELLTCPGLLFLDEPTTGLDASTALTTMQLLSDLASSQGMTVLCSLHQPRPQVYDSLDRVLLVSRGSVSFFGPPATTQAYFASLGRP 1544          
BLAST of mRNA_L-elsbetiae_contig5331.13500.1 vs. uniprot
Match: D8LNV5_ECTSI (ATP-binding cassette superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV5_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 1.580e-76
Identity = 150/259 (57.92%), Postives = 184/259 (71.04%), Query Frame = 1
Query:   64 GKGAPGDDADGWEGTVTAIMGPSGAGKTSLLNALAGRLPSAGR--GGGXXXXXXXGLTGTVRLDGEAVGAARVRTVSAYVTQEDVLPETLTCYEHLMFHAHLRL--PAGT-----------------SLSRRRDRVMEVMRQLALVDIRDSRIGGDLARGISGGEKRRLSIGTELLTRPALLFADEPTTGLDSSTALRVMQLLSQV-ASLGTTVVCSVHQPRPEVVRLIDKVIVLSRGAVAFSGPPSDAGAHFASIGRP 774
            G  +P   A  W G+VTAIMGPSGAGKT+LLN LAGR+   G+   GG        +TG VR++G AV AA VR VS YVTQEDVLPETLTC+EHLMFHA LR+  P G                  S   R+ RV++V+R+L L D+RDSRIGG L+RGISGGEKRRLSI TELLT P LLF DEPTTGLD+STAL  MQLLS + +S G TV+CS+HQPRP+V   +D+V+++SRG+++F GPP+   A+FAS+GRP
Sbjct: 1386 GNASPSAAAPAWSGSVTAIMGPSGAGKTTLLNVLAGRMHRLGKKNNGGR-------VTGAVRINGRAVTAAEVRGVSGYVTQEDVLPETLTCFEHLMFHAELRMSTPEGVTGACGCGXXXXXXXHRASQEDRKHRVLQVLRELRLEDVRDSRIGGGLSRGISGGEKRRLSIATELLTCPGLLFLDEPTTGLDASTALTTMQLLSDLTSSRGMTVLCSLHQPRPQVYDSLDRVLLVSRGSISFFGPPASTQAYFASLGRP 1637          
BLAST of mRNA_L-elsbetiae_contig5331.13500.1 vs. uniprot
Match: A0A7S0KER9_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KER9_MICPS)

HSP 1 Score: 212 bits (540), Expect = 3.280e-62
Identity = 120/229 (52.40%), Postives = 155/229 (67.69%), Query Frame = 1
Query:   82 DDADGWEGTVTAIMGPSGAGKTSLLNALAGRLPSAGRGGGXXXXXXXGLTGTVRLDGEAVGAARVRTVSAYVTQEDVLPETLTCYEHLMFHAHLRLPAGTSLSRRRDRVMEVMRQLALVDIRDSRIGGDLARGISGGEKRRLSIGTELLTRPALLFADEPTTGLDSSTALRVMQLLSQVASLGTTVVCSVHQPRPEVVRLIDKVIVLSR-GAVAFSGPPSDAGAHFASI 765
            DD+D     + AI+GPSGAGK++LL+ LAGR P                 GTVRLDGEAV A  VR  S YV Q DVLP T T +EHLMF+A LRLP  T+ S     V   MR+L LV + +S IG +  RG+SGGEKRR+SI TELLT P ++F DEPTTGLDS+ A +V+ +LS + S+G TV+ S+HQPRP++ RL+D+V+V+S  G V +SGP + A +HFAS+
Sbjct:  178 DDSDDAVSGLFAILGPSGAGKSTLLDFLAGRTPRG-----------QVAHGTVRLDGEAVSAREVRHASGYVQQTDVLPGTSTVWEHLMFNAALRLPPDTARSEAYRVVAGWMRELGLVKVAESLIGDEFTRGLSGGEKRRVSIATELLTSPGIMFLDEPTTGLDSTNAAKVVDILSGLGSIGVTVLLSIHQPRPDIFRLLDRVLVMSSTGGVIYSGPSATAESHFASM 395          
BLAST of mRNA_L-elsbetiae_contig5331.13500.1 vs. uniprot
Match: A0A7S0KCW1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KCW1_9CHLO)

HSP 1 Score: 211 bits (536), Expect = 1.220e-59
Identity = 111/218 (50.92%), Postives = 154/218 (70.64%), Query Frame = 1
Query:  115 AIMGPSGAGKTSLLNALAGRLPSAGRGGGXXXXXXXGLTGTVRLDGEAVGAARVRTVSAYVTQEDVLPETLTCYEHLMFHAHLRLPAGTSLSRRRDRVMEVMRQLALVDIRDSRIGGDLARGISGGEKRRLSIGTELLTRPALLFADEPTTGLDSSTALRVMQLLSQVASLGTTVVCSVHQPRPEVVRLIDKVIVLS-RGAVAFSGPPSDAGAHFASI 765
            AI+GPSGAGKT+LL+ LAGR                 + G +R++G+ + ++++R +S YVTQ+DVLP T T +EHL+FHA LRLP+GTS    R RV   M+ L +  + DS IG    RG+SGGEKRR+SI TELL  P ++F DEPTTGLDS+ A +V+ +LS + ++GTTV+ S+HQPRP++ RL+D+V+VLS  G+V +SGP + A AHFAS+
Sbjct:  469 AILGPSGAGKTTLLDILAGRATRT-----------HSIRGDIRVNGQPIVSSQIRRLSGYVTQDDVLPGTATVHEHLLFHAKLRLPSGTSSEAIRKRVCATMQILGIEKLADSFIGDQFQRGLSGGEKRRVSIATELLMSPGIMFLDEPTTGLDSTNAAKVVDILSSLGTMGTTVLLSIHQPRPDIFRLLDRVLVLSGEGSVVYSGPSALASAHFASM 675          
BLAST of mRNA_L-elsbetiae_contig5331.13500.1 vs. uniprot
Match: A0A7S0KBP1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KBP1_9CHLO)

HSP 1 Score: 210 bits (534), Expect = 2.470e-59
Identity = 118/230 (51.30%), Postives = 152/230 (66.09%), Query Frame = 1
Query:   79 GDDADGWEGTVTAIMGPSGAGKTSLLNALAGRLPSAGRGGGXXXXXXXGLTGTVRLDGEAVGAARVRTVSAYVTQEDVLPETLTCYEHLMFHAHLRLPAGTSLSRRRDRVMEVMRQLALVDIRDSRIGGDLARGISGGEKRRLSIGTELLTRPALLFADEPTTGLDSSTALRVMQLLSQVASLGTTVVCSVHQPRPEVVRLIDKVIVLS-RGAVAFSGPPSDAGAHFASI 765
            G   D   G + AIMGPSGAGKT+LL+ L+GRL S                G V ++G+      VR++S YV  EDVLP T T YEHLMFHA LRLPA TS    R RV   M+ L +  + DS IG    RG+SGGEKRR+SI TELL  P ++F DEPTTGLDS+ A +V+ +LS + ++GTTV+ S+HQPRP++ RL+D+V+VLS  G+V +SGP + A AHFAS+
Sbjct:  459 GGKVDAALGGMCAIMGPSGAGKTTLLDRLSGRLSSK----------VYTTHGNVYINGKLASCEDVRSISGYVIAEDVLPGTATVYEHLMFHAKLRLPASTSSKTIRKRVCATMQILGIEKLADSFIGDQFQRGLSGGEKRRVSIATELLMSPGIMFLDEPTTGLDSTNAAKVVDILSSLGTMGTTVLLSIHQPRPDIFRLLDRVLVLSGEGSVVYSGPSALASAHFASM 678          
BLAST of mRNA_L-elsbetiae_contig5331.13500.1 vs. uniprot
Match: C1E9X4_MICCC (ATP-binding cassette superfamily (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E9X4_MICCC)

HSP 1 Score: 196 bits (497), Expect = 9.590e-59
Identity = 106/211 (50.24%), Postives = 145/211 (68.72%), Query Frame = 1
Query:  115 AIMGPSGAGKTSLLNALAGRLPSAGRGGGXXXXXXXGLTGTVRLDGEAVGAARVRTVSAYVTQEDVLPETLTCYEHLMFHAHLRLPAGTSLSRRRDRVMEVMRQLALVDIRDSRIGGDLARGISGGEKRRLSIGTELLTRPALLFADEPTTGLDSSTALRVMQLLSQVASLGTTVVCSVHQPRPEVVRLIDKVIVLSR-GAVAFSGPPSDA 744
            AI+GPSGAGKT+L++ LAGR PS G            + G +R++G A+ +A +R VS YVTQ+DVLP T T +EHL FH  LRLP     +R +  + + M+ L +  I  S IG +  RG+SGGEKRR+SI TELLT P ++F DEPTTGLDS+ A +V+ +LS + S+G TVV S+HQPRP++ RL+D+V+V+S  G V +SGP + A
Sbjct:   18 AILGPSGAGKTTLIDILAGR-PSVGH----------EVAGELRVNGRAMTSAEMRAVSGYVTQDDVLPGTSTVWEHLTFHGALRLPGNVERARLKAVIWQTMQDLGISKIAHSFIGDEFTRGLSGGEKRRVSIATELLTSPGIMFLDEPTTGLDSTNAAKVVDILSGLGSIGVTVVLSIHQPRPDIFRLLDRVLVMSSTGGVIYSGPSATA 217          
BLAST of mRNA_L-elsbetiae_contig5331.13500.1 vs. uniprot
Match: A4S3Q9_OSTLU (ABC(ABCG) family transporter: multidrug (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S3Q9_OSTLU)

HSP 1 Score: 202 bits (515), Expect = 1.050e-57
Identity = 113/226 (50.00%), Postives = 149/226 (65.93%), Query Frame = 1
Query:   91 DGWEGTVTAIMGPSGAGKTSLLNALAGRLPSAGRGGGXXXXXXXGLTGTVRLDGEAVGAARVRTVSAYVTQEDVLPETLTCYEHLMFHAHLRLPAGTSLSRRRDRVMEVMRQLALVDIRDSRIGGDLARGISGGEKRRLSIGTELLTRPALLFADEPTTGLDSSTALRVMQLLSQVASLGTTVVCSVHQPRPEVVRLIDKVIVLSR-GAVAFSGPPSDAGAHFASI 765
            D   G + A+MGPSGAGKT+LL+ L+GRL S                G + ++G+      +R VS YV  EDVLP T T YEHL+FHA LRLPA T  S  R RV   M+ L +  + DS IG    RG+SGGEKRR+SI TELL  P ++F DEPTTGLDS+ A +V+ +LS + ++GTTV+ S+HQPRP++ RL+D+V+VLS  G+V +SGP + A AHF S+
Sbjct:   39 DDVRGGMCALMGPSGAGKTTLLDRLSGRLSS----------NVYDSAGEIFMNGKVASVEDMRAVSGYVIDEDVLPGTATVYEHLLFHAKLRLPAETRQSTIRKRVRATMQILGIEKLADSFIGDQFQRGLSGGEKRRVSIATELLMSPGIMFLDEPTTGLDSTNAAKVVDILSGLGAMGTTVLLSIHQPRPDIFRLLDRVLVLSGDGSVVYSGPSALASAHFNSM 254          
BLAST of mRNA_L-elsbetiae_contig5331.13500.1 vs. uniprot
Match: C1E9X3_MICCC (ATP-binding cassette superfamily (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E9X3_MICCC)

HSP 1 Score: 201 bits (510), Expect = 1.850e-57
Identity = 113/216 (52.31%), Postives = 146/216 (67.59%), Query Frame = 1
Query:  121 MGPSGAGKTSLLNALAGRLPSAGRGGGXXXXXXXGLTGTVRLDGEAVGAARVRTVSAYVTQEDVLPETLTCYEHLMFHAHLRLPAGTSLSRRRDRVMEVMRQLALVDIRDSRIGGDLARGISGGEKRRLSIGTELLTRPALLFADEPTTGLDSSTALRVMQLLSQVASLGTTVVCSVHQPRPEVVRLIDKVIVLS-RGAVAFSGPPSDAGAHFASI 765
            +GPSGAGK++LL+ LAGR P                 GTVRLDGE V A  VR  S YV Q DVLP T T +EHLMF+A LRLP  T+ S     V   MR+L LV + +S IG +  RG+SGGEKRR+SI TELLT P ++F DEPTTGLDS+ A +V+ +LS ++  G TV+ S+HQPRP++ RL+D+V+VLS +GAV + GP   A +HFA++
Sbjct:    1 LGPSGAGKSTLLDFLAGRTPRG-----------QVAHGTVRLDGEVVSAREVRHASGYVQQTDVLPGTSTVWEHLMFNAALRLPPDTARSEMYRVVAGWMRELGLVKVAESLIGDEFTRGLSGGEKRRVSIATELLTSPGIMFLDEPTTGLDSTNAAKVVDILSGLSRAGVTVLLSIHQPRPDIFRLLDRVLVLSGQGAVVYGGPSHRAESHFAAM 205          
BLAST of mRNA_L-elsbetiae_contig5331.13500.1 vs. uniprot
Match: A0A7R9Y6A1_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9Y6A1_MICPS)

HSP 1 Score: 205 bits (521), Expect = 3.230e-57
Identity = 111/218 (50.92%), Postives = 148/218 (67.89%), Query Frame = 1
Query:  115 AIMGPSGAGKTSLLNALAGRLPSAGRGGGXXXXXXXGLTGTVRLDGEAVGAARVRTVSAYVTQEDVLPETLTCYEHLMFHAHLRLPAGTSLSRRRDRVMEVMRQLALVDIRDSRIGGDLARGISGGEKRRLSIGTELLTRPALLFADEPTTGLDSSTALRVMQLLSQVASLGTTVVCSVHQPRPEVVRLIDKVIVLSR-GAVAFSGPPSDAGAHFASI 765
            AI+GPSGAGKT+LL+ LAGR PS G            +TG V LDGE +  + +R VS YV Q+DVLP T T +EHLMFHA LRLP      R R  V + MR L +  +  + IG    RG+SGGEKRR+S+ TELLT P ++F DEPTTGLD++ A +V+ +L+ + +LG T++ S+HQPRP++ RL+D+V+V+S  G V +SGP  DA AHF S+
Sbjct:   33 AILGPSGAGKTTLLDVLAGR-PSPGH----------VITGDVALDGERMSNSELRHVSGYVPQDDVLPGTSTVWEHLMFHAALRLPGSVDRKRLRSVVWQTMRDLGITKLAHAHIGDAFTRGLSGGEKRRVSVATELLTSPGVMFLDEPTTGLDATNAAKVVDILAGLGALGVTILLSIHQPRPDIFRLLDRVLVMSSDGRVVYSGPSLDAEAHFESM 239          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5331.13500.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKD9_9PHAE3.710e-10278.11ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A6H5KT00_9PHAE2.320e-7758.30ABC protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP... [more]
D8LNV5_ECTSI1.580e-7657.92ATP-binding cassette superfamily n=1 Tax=Ectocarpu... [more]
A0A7S0KER9_MICPS3.280e-6252.40Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A7S0KCW1_9CHLO1.220e-5950.92Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A7S0KBP1_9CHLO2.470e-5951.30Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
C1E9X4_MICCC9.590e-5950.24ATP-binding cassette superfamily (Fragment) n=1 Ta... [more]
A4S3Q9_OSTLU1.050e-5750.00ABC(ABCG) family transporter: multidrug (Fragment)... [more]
C1E9X3_MICCC1.850e-5752.31ATP-binding cassette superfamily (Fragment) n=1 Ta... [more]
A0A7R9Y6A1_MICPS3.230e-5750.92Hypothetical protein (Fragment) n=2 Tax=Micromonas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5331contigL-elsbetiae_contig5331:6176..8673 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score349.0
Seed ortholog evalue2.1e-93
Seed eggNOG ortholog2880.D8LNU0
KEGG koko:K05681
KEGG TC3.A.1.204
KEGG Pathwayko01523,ko02010,ko04976,map01523,map02010,map04976
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1131@1,KOG0061@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04090,ko04147
Exons4
Model size861
Cds size858
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5331.13500.1prot_L-elsbetiae_contig5331.13500.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5331 6178..8673 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816553.2238443-CDS-L-elsbetiae_contig5331:6177..63451622816553.2238443-CDS-L-elsbetiae_contig5331:6177..6345Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5331 6178..6345 -
1691683642.791248-CDS-L-elsbetiae_contig5331:6177..63451691683642.791248-CDS-L-elsbetiae_contig5331:6177..6345Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5331 6178..6345 -
1622816553.2366774-CDS-L-elsbetiae_contig5331:6499..66151622816553.2366774-CDS-L-elsbetiae_contig5331:6499..6615Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5331 6500..6615 -
1691683642.8062935-CDS-L-elsbetiae_contig5331:6499..66151691683642.8062935-CDS-L-elsbetiae_contig5331:6499..6615Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5331 6500..6615 -
1622816553.2498565-CDS-L-elsbetiae_contig5331:7551..77111622816553.2498565-CDS-L-elsbetiae_contig5331:7551..7711Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5331 7552..7711 -
1691683642.8165731-CDS-L-elsbetiae_contig5331:7551..77111691683642.8165731-CDS-L-elsbetiae_contig5331:7551..7711Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5331 7552..7711 -
1622816553.2605608-CDS-L-elsbetiae_contig5331:8259..86731622816553.2605608-CDS-L-elsbetiae_contig5331:8259..8673Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5331 8260..8673 -
1691683642.831119-CDS-L-elsbetiae_contig5331:8259..86731691683642.831119-CDS-L-elsbetiae_contig5331:8259..8673Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5331 8260..8673 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5331.13500.1

>prot_L-elsbetiae_contig5331.13500.1 ID=prot_L-elsbetiae_contig5331.13500.1|Name=mRNA_L-elsbetiae_contig5331.13500.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=286bp
ARGADLTEAGLVAASSSSSREGKGAPGDDADGWEGTVTAIMGPSGAGKTS
LLNALAGRLPSAGRGGGIGGGGGFGLTGTVRLDGEAVGAARVRTVSAYVT
QEDVLPETLTCYEHLMFHAHLRLPAGTSLSRRRDRVMEVMRQLALVDIRD
SRIGGDLARGISGGEKRRLSIGTELLTRPALLFADEPTTGLDSSTALRVM
QLLSQVASLGTTVVCSVHQPRPEVVRLIDKVIVLSRGAVAFSGPPSDAGA
HFASIGRPFPRLEASFAGTTATTAVAADADAADAAD
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mRNA from alignment at L-elsbetiae_contig5331:6176..8673-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5331.13500.1 ID=mRNA_L-elsbetiae_contig5331.13500.1|Name=mRNA_L-elsbetiae_contig5331.13500.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2498bp|location=Sequence derived from alignment at L-elsbetiae_contig5331:6176..8673- (Laminarionema elsbetiae ELsaHSoW15)
GCTCGGGGTGCTGATTTGACCGAGGCCGGGCTCGTAGCGGCGTCATCATC ATCTTCGAGGGAAGGCAAGGGGGCCCCGGGAGACGACGCGGACGGGTGGG AAGGGACCGTGACGGCCATCATGGGGCCTTCGGGGGCGGGAAAGACTTCC TTGCTCAACGCGCTCGCCGGGCGGCTACCAAGCGCCGGCCGCGGCGGCGG TATTGGCGGCGGCGGAGGGTTCGGGCTGACCGGCACCGTGCGGCTCGACG GGGAGGCGGTCGGCGCGGCGCGGGTCCGAACGGTGTCGGCTTACGTGACC CAGGAAGACGTGCTGCCCGAGACGCTCACGTGCTACGAGCACCTCATGTT CCACGCGCACCTGAGGCTGCCGGCGGGGACCTCTCTGTCGCGGCGGCGCG ACAGGGTCATGGAGGTGGGGTCTAGGGGATGCCGGGTTTGCGGTCGTCTA GGTTTACCGGGGGTTGTTGTTGTTGTTGTTGTTGTTTTCTCATATAAGCC AGTCTCAAGACAGGACACGCTCGACGCCGCTGAAGAAGAGCATATACATA GATAAAGGCAGACCGCTGACATTTGCAGGACAATTGTTTAAGAACGGTGC GTGTACTTTCTTTCCCGAAAACAGAGCGAACGGTCTCCGTGACTTTTGCC CCTGCGTGTGCGTTTGAGTATGTTGATGTGTTTGATCATTGGCGGCGCAT ACCGGAGACAGTGCAGCTAGACTAGCGTGGAGCACCCAACAAAGTGCCGA CCTGGTGCCCGCGACACGCTGCGCACGACCCATAACACCCAGCAGGCATT TTGAACAACAAGAGCACCAGACAGAGTGTTCGATGTCTCTTCCTTCCTTC CCCTCCGATTCCTTCCTTTCATCACCTTTTATGTACGTGATTAATCTGCT ACACGAAGCGCGTCTGTTCTCCCGAGTGCGTCACAAACAACAACGTTACC GCTCCGCTGTAGGTAATGAGGCAGCTGGCGCTCGTCGACATCCGGGACTC GCGCATCGGCGGGGATCTGGCTCGTGGGATATCGGGGGGCGAGAAGCGGC GGCTGTCGATCGGCACAGAGCTGCTCACCCGCCCGGCCCTCCTCTTCGCC GACGAACCCACTACGGGGTTAGGTGAGAATGACAGTGATAGTGAGAATGA GAATAGGAAGAAGGACTCTCGGATGAACCCCACCGAGATTAGATGAATGA TAATGATAGTCAGAATGGTGATGATGATGAGAACGAGGATGGGAAGAAGG TCTCCAAGGCGACGGCAGAGGGGCGGTGGCGGGGCCGGGAAGTGAGGTTG GTTCGTTGCCGGTTCGGCGGTCTCGAAAGATGGTTTCGTTTCACCGGGGA GTTGGGTGCATTGCGGTGTACGACGGTCGTTCTTTGTTGAGCACAGGAGC AGTCGAAGGGACAGATGAAGGGCGTCCGTCGCTTTTGTTCGAGCTCCGTG TGCTGTTCGCCCTTAGGTATTGCCGTCTGTAGCGATTTTTTTTTCTATTT TTTCAAGGCCGATTTCGCTCGGAAAATGCACGGTGCGTCCTTGCCGTATG ACAGCAGCTGCAGGGTTCAGTAACCACGGCATCACGGGAGGGGGTTAGGA GGAATGAGATGCAGAAGCAGAGAGGCATTGCTTCCGTTTTACCTGGAAAA TGTCGATTCTTTCTTTTTAAGAAAGAATCTGCTCATCGGAGATCGATATC GGCAAAGATGAAATACCACGGGCGTACAGCTGATACAGCCCTGACGATTG CCCTTTTCATGTGTCGTATTTTATATTCGCAAAACCATGGCCCCCAATCT TCATGGCTTCACTCAGCACTCGCACTCACACACGCGTCCCTTATTTTCAA CACTCGAGCATGTGTGGACTTTTTGGTTTATGTGTCCTGCCCTGACTGCT GTGACGCGAAACGCGTCCTCGACGACCAAACCAACAACAGCAACAGCAAC ATACCGGATGGAGTGCATACCAAGATATATCGTTTGCCCTCTTCTTGATG ACTTTCTGCCCCGCCCTCCCCCCTCAAACCCAACACACGAATGCGATGGA TGAGACAGACTCGTCGACGGCCCTACGAGTGATGCAGCTGTTGTCCCAGG TGGCGTCCCTGGGCACGACCGTGGTCTGCAGCGTCCACCAGCCCCGCCCG GAGGTGGTCCGCCTCATCGACAAGGTACGGAATCGGTCACGTATATCGGT GGCCAATGGTCGTACGTACTGACTGCGCTAGGTACGGCAAGTGAACCCTC GTTCCCCCGGTGGGTCCTTTCTGCCCCCCGAGCTTGACGCTTGACCCCCC CCAAAAAAATAAATAAATGAAATATTAGGTGATCGTCCTGTCCCGGGGAG CCGTGGCGTTCTCCGGGCCCCCCTCGGACGCAGGGGCGCACTTCGCGTCC ATCGGCAGGCCGTTCCCGCGGCTCGAAGCAAGTTTTGCGGGGACCACGGC AACAACTGCCGTTGCCGCCGACGCCGACGCCGCTGATGCTGCTGATGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5331:6176..8673-

>mRNA_L-elsbetiae_contig5331.13500.1 ID=mRNA_L-elsbetiae_contig5331.13500.1|Name=mRNA_L-elsbetiae_contig5331.13500.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1716bp|location=Sequence derived from alignment at L-elsbetiae_contig5331:6176..8673- (Laminarionema elsbetiae ELsaHSoW15)
GCTCGGGGTGCTGATTTGACCGAGGCCGGGCTCGTAGCGGCGTCATCATC
ATCTTCGAGGGAAGGCAAGGGGGCCCCGGGAGACGACGCGGACGGGTGGG
AAGGGACCGTGACGGCCATCATGGGGCCTTCGGGGGCGGGAAAGACTTCC
TTGCTCAACGCGCTCGCCGGGCGGCTACCAAGCGCCGGCCGCGGCGGCGG
TATTGGCGGCGGCGGAGGGTTCGGGCTGACCGGCACCGTGCGGCTCGACG
GGGAGGCGGTCGGCGCGGCGCGGGTCCGAACGGTGTCGGCTTACGTGACC
CAGGAAGACGTGCTGCCCGAGACGCTCACGTGCTACGAGCACCTCATGTT
CCACGCGCACCTGAGGCTGCCGGCGGGGACCTCTCTGTCGCGGCGGCGCG
ACAGGGTCATGGAGGCTCGGGGTGCTGATTTGACCGAGGCCGGGCTCGTA
GCGGCGTCATCATCATCTTCGAGGGAAGGCAAGGGGGCCCCGGGAGACGA
CGCGGACGGGTGGGAAGGGACCGTGACGGCCATCATGGGGCCTTCGGGGG
CGGGAAAGACTTCCTTGCTCAACGCGCTCGCCGGGCGGCTACCAAGCGCC
GGCCGCGGCGGCGGTATTGGCGGCGGCGGAGGGTTCGGGCTGACCGGCAC
CGTGCGGCTCGACGGGGAGGCGGTCGGCGCGGCGCGGGTCCGAACGGTGT
CGGCTTACGTGACCCAGGAAGACGTGCTGCCCGAGACGCTCACGTGCTAC
GAGCACCTCATGTTCCACGCGCACCTGAGGCTGCCGGCGGGGACCTCTCT
GTCGCGGCGGCGCGACAGGGTCATGGAGGTAATGAGGCAGCTGGCGCTCG
TCGACATCCGGGACTCGCGCATCGGCGGGGATCTGGCTCGTGGGATATCG
GGGGGCGAGAAGCGGCGGCTGTCGATCGGCACAGAGCTGCTCACCCGCCC
GGCCCTCCTCTTCGCCGACGAACCCACTACGGGGTTAGGTAATGAGGCAG
CTGGCGCTCGTCGACATCCGGGACTCGCGCATCGGCGGGGATCTGGCTCG
TGGGATATCGGGGGGCGAGAAGCGGCGGCTGTCGATCGGCACAGAGCTGC
TCACCCGCCCGGCCCTCCTCTTCGCCGACGAACCCACTACGGGGTTAGAC
TCGTCGACGGCCCTACGAGTGATGCAGCTGTTGTCCCAGGTGGCGTCCCT
GGGCACGACCGTGGTCTGCAGCGTCCACCAGCCCCGCCCGGAGGTGGTCC
GCCTCATCGACAAGACTCGTCGACGGCCCTACGAGTGATGCAGCTGTTGT
CCCAGGTGGCGTCCCTGGGCACGACCGTGGTCTGCAGCGTCCACCAGCCC
CGCCCGGAGGTGGTCCGCCTCATCGACAAGGTGATCGTCCTGTCCCGGGG
AGCCGTGGCGTTCTCCGGGCCCCCCTCGGACGCAGGGGCGCACTTCGCGT
CCATCGGCAGGCCGTTCCCGCGGCTCGAAGCAAGTTTTGCGGGGACCACG
GCAACAACTGCCGTTGCCGCCGACGCCGACGCCGCTGATGCTGCTGATGT
GATCGTCCTGTCCCGGGGAGCCGTGGCGTTCTCCGGGCCCCCCTCGGACG
CAGGGGCGCACTTCGCGTCCATCGGCAGGCCGTTCCCGCGGCTCGAAGCA
AGTTTTGCGGGGACCACGGCAACAACTGCCGTTGCCGCCGACGCCGACGC
CGCTGATGCTGCTGAT
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