mRNA_L-elsbetiae_contig533.13497.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig533.13497.1 vs. uniprot
Match: D7FJJ6_ECTSI (Solute carrier family 35 member 3A, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJJ6_ECTSI) HSP 1 Score: 412 bits (1060), Expect = 5.040e-140 Identity = 222/277 (80.14%), Postives = 246/277 (88.81%), Query Frame = 2 Query: 329 ESGEMRTFTKKLRVEVAGKPREIAKLMVPALLYTIQNNMLYEALENLDAATYSVCYQSKILTTALFSVFLLRKKLSATKWGALLLLTSGVALAQLSGLSAEDSREAHETAAGQSPILGFMCVMAAACTSGFAGVYFEMLLKGSKTSLWIRNIQMGIPSIVLSIVSVLVKDWKPVTQKGFFHGYNGVVVAVIILQAVGGLVVAVVVKYADNIRKSFATAVSIIISCTLSALLFDFKPTFTFLLGSAMVVGSVFLYTKQDRTARSLPLFSKNRNTTRRV 1159 ESGE+RTF+KKLRVEVAGKPRE+AKLM+PA+LYT+QNNMLY ALENLDAATYSVCYQ+KILTTALFSV LLR+KLSATKWGAL+LL GVALAQLS S +S +A E++ GQSP++GF+CVM AACTSGFAGVYFEMLLKGSKTSLWIRNIQMGIPSIVL+ SV+VKDW+ VT GFF GY VV AVI+LQAVGGLVVAVVVKYADNIRKSFATA+SIIISC LS L F FKPTF F +GSAMVVGSVFLYTKQDR AR LPLF+K R+ TRRV Sbjct: 62 ESGELRTFSKKLRVEVAGKPREMAKLMIPAMLYTLQNNMLYMALENLDAATYSVCYQTKILTTALFSVILLRRKLSATKWGALVLLAVGVALAQLSSQST-NSPKADESSRGQSPVVGFLCVMGAACTSGFAGVYFEMLLKGSKTSLWIRNIQMGIPSIVLAFGSVIVKDWRAVTSNGFFFGYGWVVAAVIVLQAVGGLVVAVVVKYADNIRKSFATAISIIISCALSTLFFAFKPTFLFFIGSAMVVGSVFLYTKQDRPAR-LPLFNKGRSVTRRV 336
BLAST of mRNA_L-elsbetiae_contig533.13497.1 vs. uniprot
Match: A0A836C750_9STRA (Nucleotide-sugar transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C750_9STRA) HSP 1 Score: 278 bits (711), Expect = 1.300e-86 Identity = 160/319 (50.16%), Postives = 211/319 (66.14%), Query Frame = 2 Query: 332 SGEMRTFTKKLRVEVAGKPREIAKLMVPALLYTIQNNMLYEALENLDAATYSVCYQSKILTTALFSVFLLRKKLSATKWGALLLLTSGVALAQLSGLSAEDSREAHE---------TAAG---------------------------------QSPILGFMCVMAAACTSGFAGVYFEMLLKGSKTSLWIRNIQMGIPSIVLSIVSVLVKDWKPVTQKGFFHGYNGVVVAVIILQAVGGLVVAVVVKYADNIRKSFATAVSIIISCTLSALLFDFKPTFTFLLGSAMVVGSVFLYTKQD--------RTARSLPLFSKN 1138 SG + F + +++E+ KP E+ KL +P+ LY +QNN+LYEAL NLD ATYSVCYQ KI+TTALFSV LL+K+LS KW AL+LLT GVALA+L+ +A + +A TAA Q +LGF+CV+AA CTSGFAGV+FEM+LKG+KTSLWIRN+QMG+PSI+ ++ S KD + +GFF+GY G+V VI+LQAVGGL+VAVVVKYADNI K+FA+AVSI+ SC LSALLF F+P+ F++G+ +V SVFLY+K D + ++LPLF + Sbjct: 61 SGGYKPFLRTMKIEIVNKPAELGKLALPSFLYMVQNNLLYEALSNLDPATYSVCYQLKIMTTALFSVILLKKRLSPLKWMALVLLTLGVALAELATHAAPKAADADAPPEPMLPLPTAAPDLDSGSAIGNPLQRRLQEDGEAAALGGFEELKMQRQLLGFLCVLAATCTSGFAGVWFEMILKGAKTSLWIRNVQMGLPSILFALASCYTKDLALLRDRGFFYGYTGIVWGVIVLQAVGGLMVAVVVKYADNILKAFASAVSIVTSCLLSALLFGFRPSPVFMVGTLLVSVSVFLYSKPDGVKPLKAQASKQNLPLFDSH 379
BLAST of mRNA_L-elsbetiae_contig533.13497.1 vs. uniprot
Match: A0A7S2U9J9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9J9_9STRA) HSP 1 Score: 268 bits (686), Expect = 6.580e-83 Identity = 137/247 (55.47%), Postives = 185/247 (74.90%), Query Frame = 2 Query: 386 PREIAKLMVPALLYTIQNNMLYEALENLDAATYSVCYQSKILTTALFSVFLLRKKLSATKWGALLLLTSGVALAQLSGLSAEDSREAHETAAGQSPILGFMCVMAAACTSGFAGVYFEMLLKGSKTSLWIRNIQMGIPSIVLSIVSVLVKDWKPVTQKGFFHGYNGVVVAVIILQAVGGLVVAVVVKYADNIRKSFATAVSIIISCTLSALLFDFKPTFTFLLGSAMVVGSVFLYTKQDRTARSLPL 1126 P E+ KL VP+LLYT+QNN+LY AL NLDAATY VCYQ KILTTALFS LL++ S KW +L++LT GVA+ QLSG + A E A ++ ++G + V+ AACTSGFAGVYFE +LKGS T+LW+RNIQMG+PS++++ + V +KD + +KGFF GY +V V+ +QAVGGL+VAVVVKYADN+ K FAT+ SIIISC +SA++FDF+P F F+ G+++V+ S +Y++ D R P+ Sbjct: 120 PFEVLKLCVPSLLYTVQNNLLYLALTNLDAATYQVCYQLKILTTALFSATLLQRSFSRLKWMSLVILTIGVAIVQLSGSGDKHHHVASEDEASRNRMVGLVAVLCAACTSGFAGVYFERILKGSSTTLWLRNIQMGLPSVIIAYIGVYMKDSMIIAEKGFFVGYTPLVWTVVTVQAVGGLIVAVVVKYADNVLKVFATSFSIIISCIISAVVFDFRPNFLFVCGASLVMASTVMYSRPDTRRRKKPI 366
BLAST of mRNA_L-elsbetiae_contig533.13497.1 vs. uniprot
Match: B7FYG7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FYG7_PHATC) HSP 1 Score: 262 bits (670), Expect = 4.170e-81 Identity = 145/274 (52.92%), Postives = 196/274 (71.53%), Query Frame = 2 Query: 380 GKPREIAKLMVPALLYTIQNNMLYEALENLDAATYSVCYQSKILTTALFSVFLLRKKLSATKWGALLLLTSGVALAQLSGL----SAEDSREAHE-------TAAGQSPILGFMCVMAAACTSGFAGVYFEMLLKGSKTSLWIRNIQMGIPSIVLSIVSVLVKDWKPVTQKGFFHGYNGVVVAVIILQAVGGLVVAVVVKYADNIRKSFATAVSIIISCTLSALLFDFKPTFTFLLGSAMVVGSVFLY------TKQDRTARSLPLFSKNRNTT 1150 G P E+ KL VP+LLYT+QNN+LY AL NLDAATY VCYQ KILTTALFS LL++K S KW +L++LT GVA+ QLSG S +DS+ A + TAA + +G + V+ AACTSGF+GVYFE +LKGS+TSLWIRN+QMG+ SIV++ ++V VKD + + +GF+ GYN +V V+ +QAVGGL+VA VVKYADN+ K FAT+ SI++SC +SA LFDF P+ +FL+G+++VV + +Y T++ R LP+ +N T Sbjct: 61 GSPLELLKLTVPSLLYTVQNNLLYLALTNLDAATYQVCYQLKILTTALFSALLLQRKFSTMKWLSLVVLTIGVAIVQLSGSGDQHSEQDSKAATDAVDDTNGTAAAHTRWVGLVAVLCAACTSGFSGVYFEKILKGSRTSLWIRNVQMGLSSIVIAYLTVYVKDAEAIRTQGFWGGYNTLVWTVVTVQAVGGLIVATVVKYADNVLKVFATSFSIVVSCIVSAFLFDFHPSVSFLVGASLVVTATVMYSSPETRTRKTRRRPVLPIHHRNNTAT 334
BLAST of mRNA_L-elsbetiae_contig533.13497.1 vs. uniprot
Match: A0A1E7F618_9STRA (UDP-N-acetylglucosamine transporter-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F618_9STRA) HSP 1 Score: 259 bits (663), Expect = 2.070e-80 Identity = 136/259 (52.51%), Postives = 187/259 (72.20%), Query Frame = 2 Query: 362 LRVEVAGKPREIAKLMVPALLYTIQNNMLYEALENLDAATYSVCYQSKILTTALFSVFLLRKKLSATKWGALLLLTSGVALAQLSGLSAEDSREAHETAAGQSPILGFMCVMAAACTSGFAGVYFEMLLKGSKTSLWIRNIQMGIPSIVLSIVSVLVKDWKPVTQKGFFHGYNGVVVAVIILQAVGGLVVAVVVKYADNIRKSFATAVSIIISCTLSALLFDFKPTFTFLLGSAMVVGSVFLYTKQDRTARSLPLFSKN 1138 L V P E+ KL VP+ LYT+QNN+LY AL NLDAATY VCYQ KILTTA+FS+ LL++K S KW AL+LLT GV++ Q+SG S + S+ E S +G + V+ AACTSGF+GVYFE +LKG+ TSLW+RN+QMGIPS++++ +++ KD V+++GF GY +V V+ +QAVGGL+VAVVVKYADN+ K FAT+ SI++SC LSA+ FDF +F F+ G+++VV S LY + +R R P+ ++ Sbjct: 55 LNEHVMQSPIEMMKLTVPSFLYTVQNNLLYFALTNLDAATYQVCYQLKILTTAVFSMILLQRKFSPKKWAALVLLTVGVSIVQISG-SRDSSKSETEK---HSQFIGLIAVLCAACTSGFSGVYFEKILKGATTSLWLRNVQMGIPSVIIAFITIYAKDGAAVSRQGFLGGYTPLVWTVVTVQAVGGLIVAVVVKYADNVLKVFATSFSIVVSCVLSAIFFDFHASFAFIAGASLVVMSTALYAQPERKRRRKPILPES 309
BLAST of mRNA_L-elsbetiae_contig533.13497.1 vs. uniprot
Match: A0A7S3L616_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L616_9STRA) HSP 1 Score: 263 bits (672), Expect = 2.150e-80 Identity = 139/254 (54.72%), Postives = 185/254 (72.83%), Query Frame = 2 Query: 362 LRVEVAGKPREIAKLMVPALLYTIQNNMLYEALENLDAATYSVCYQSKILTTALFSVFLLRKKLSATKWGALLLLTSGVALAQLSGLSAEDS------REAHETAAGQSPILGFMCVMAAACTSGFAGVYFEMLLKGSKTSLWIRNIQMGIPSIVLSIVSVLVKDWKPVTQKGFFHGYNGVVVAVIILQAVGGLVVAVVVKYADNIRKSFATAVSIIISCTLSALLFDFKPTFTFLLGSAMVVGSVFLYTKQDR 1105 L V P EI KL VP+LLYT+QNN+LY AL NLDAATY VCYQ KILTTALFS +L++K S KW AL++LT GVA+ Q+SG + S A Q+ ++G + V+ AACTSGF+GVYFE +LKGS+TSLWIRNIQMG+PS+V++ ++V VKD V Q+GFF GYN +V V+ +QA+GGL+VA VVKYADN+ K FAT+ SI++SC +SA LFDF P++ FL G+++VV + +Y+ ++ Sbjct: 144 LHQHVIQSPMEILKLTVPSLLYTVQNNLLYLALTNLDAATYQVCYQLKILTTALFSAVMLQRKFSGQKWFALVVLTVGVAVVQVSGSGDQHSDXXXXXXXPSNQEAPQNRVVGLVAVLCAACTSGFSGVYFEKILKGSRTSLWIRNIQMGLPSVVIAYIAVCVKDAAAVRQQGFFGGYNNIVWTVVAVQAIGGLIVATVVKYADNVLKVFATSFSIVLSCIISAFLFDFHPSWMFLCGASLVVTATVMYSSPEK 397
BLAST of mRNA_L-elsbetiae_contig533.13497.1 vs. uniprot
Match: A0A7S2VC43_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VC43_9STRA) HSP 1 Score: 257 bits (656), Expect = 4.760e-79 Identity = 138/267 (51.69%), Postives = 186/267 (69.66%), Query Frame = 2 Query: 356 KKLRVEVAGKPREIAKLMVPALLYTIQNNMLYEALENLDAATYSVCYQSKILTTALFSVFLLRKKLSATKWGALLLLTSGVALAQLSGLSAEDSREAHETAAGQ------------------SPILGFMCVMAAACTSGFAGVYFEMLLKGSKTSLWIRNIQMGIPSIVLSIVSVLVKDWKPVTQKGFFHGYNGVVVAVIILQAVGGLVVAVVVKYADNIRKSFATAVSIIISCTLSALLFDFKPTFTFLLGSAMVVGSVFLYTKQD 1102 ++L + V P EIAKL +P+LLYTIQNN+LY AL NLDAATY VCYQ KILTTALFS LL++K S KW +L++LT GVA+ Q+SG + + AH + ++G + V+ AACTSGF+GVYFE +LKGS+TSLWIRNIQMG+PSI+++ ++V VKD V +GF GY+ +V V+ +QAVGGL+VA VVKYADN+ K FAT+ SI++SC +SA LFDF PT+ FL G+++VV + +Y+ + Sbjct: 37 RELYLHVVQSPMEIAKLTIPSLLYTIQNNLLYLALTNLDAATYQVCYQLKILTTALFSALLLQRKFSGQKWMSLIVLTVGVAIVQISGSGDQHTTNAHXXXXXXXXXXXXXXXXXXXXXXXXNRVIGLIAVLCAACTSGFSGVYFEKILKGSRTSLWIRNIQMGLPSILIAYITVYVKDAPAVQTQGFLGGYSSLVWTVVTVQAVGGLIVATVVKYADNVLKVFATSFSIVVSCIISAFLFDFHPTWMFLCGASLVVTATVMYSSPE 303
BLAST of mRNA_L-elsbetiae_contig533.13497.1 vs. uniprot
Match: A0A7S4SDY4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SDY4_9STRA) HSP 1 Score: 259 bits (662), Expect = 5.020e-79 Identity = 139/258 (53.88%), Postives = 183/258 (70.93%), Query Frame = 2 Query: 386 PREIAKLMVPALLYTIQNNMLYEALENLDAATYSVCYQSKILTTALFSVFLLRKKLSATKWGALLLLTSGVALAQLSGLSAEDSREAHETAAGQSPILGFMCVMAAACTSGFAGVYFEMLLKGSKTSLWIRNIQMGIPSIVLSIVSVLVKDWKPVTQKGFFHGYNGVVVAVIILQAVGGLVVAVVVKYADNIRKSFATAVSIIISCTLSALLFDFKPTFTFLLGSAMVVGSVFLYTKQDRTARSLPLFSKNRNTTRRV 1159 P E+ KL VP+LLY +QNN+LY AL NLDAATY VCYQ KILTTA+FS LL++ S TKW +L++LT+GVA+ Q SG S + S + Q+ +G + V+ AACTSGF+GVYFE +LKGSKTSLWIRNIQMG SI +S++ V ++D V+ KGFF GY+ +V V+ +QA GGL+VAVVVKYADN+ K+FA + SII SC +S++LFDF+P FL G+A+VV S LY+ D+ R N+ +V Sbjct: 143 PFEVLKLCVPSLLYAVQNNLLYIALTNLDAATYQVCYQLKILTTAIFSAILLKRTFSCTKWFSLIILTAGVAIVQTSGSSDKSSSSDANVSINQNRFVGTVAVLCAACTSGFSGVYFEKILKGSKTSLWIRNIQMGFSSIFISLIMVFLQDLAAVSTKGFFVGYSPLVWLVVTIQAAGGLIVAVVVKYADNVLKTFAASFSIIASCIVSSVLFDFQPNKMFLAGAALVVSSTVLYSWPDQGDRKTKRHILNKTPAAKV 400
BLAST of mRNA_L-elsbetiae_contig533.13497.1 vs. uniprot
Match: A0A7S3PWM7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWM7_9STRA) HSP 1 Score: 252 bits (644), Expect = 1.330e-76 Identity = 135/251 (53.78%), Postives = 182/251 (72.51%), Query Frame = 2 Query: 362 LRVEVAGKPREIAKLMVPALLYTIQNNMLYEALENLDAATYSVCYQSKILTTALFSVFLLRKKLSATKWGALLLLTSGVALAQLSGLSAEDSREAHETAAGQSPILGFMCVMAAACTSGFAGVYFEMLLKGSKTSLWIRNIQMGIPSIVLSIVSVLVKDWKPVTQKGFFHGYNGVVVAVIILQAVGGLVVAVVVKYADNIRKSFATAVSIIISCTLSALLFDFKPTFTFLLGSAMVVGSVFLYTKQDRTAR 1114 L V P E+ K+ VP+ LY IQNN+LY AL NLDAATY VCYQ KILTTALFS +L + S TKW AL++LT GVA+ Q SG SA H + Q+ LG ++ AACTSGF+GVYFE +LKGS TSLW+RNIQMG+PS++L++++V ++D + + +KGFF GY+ V V+++QAVGGL+VAVVVKYADN+ K+FA++ I+ISC +SA+LF K FL+G+++VV S LY+K ++ R Sbjct: 131 LTTHVWNSPFEVIKISVPSFLYVIQNNLLYLALTNLDAATYQVCYQLKILTTALFSATMLNRTFSKTKWLALVILTIGVAVVQTSGNSAS-----HSENSDQNRSLGLFAILCAACTSGFSGVYFEKMLKGSSTSLWMRNIQMGLPSMLLALMTVFIQDGRIIREKGFFVGYSTTVWTVVVVQAVGGLIVAVVVKYADNVLKTFASSFGIVISCLMSAILFGQKYNAAFLVGASLVVLSTVLYSKPEKRQR 376
BLAST of mRNA_L-elsbetiae_contig533.13497.1 vs. uniprot
Match: B8CBK0_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBK0_THAPS) HSP 1 Score: 248 bits (633), Expect = 3.710e-76 Identity = 130/239 (54.39%), Postives = 183/239 (76.57%), Query Frame = 2 Query: 374 VAGKPREIAKLMVPALLYTIQNNMLYEALENLDAATYSVCYQSKILTTALFSVFLLRKKLSATKWGALLLLTSGVALAQLSGLSAEDSREAHETAAGQSPILGFMCVMAAACTSGFAGVYFEMLLKGSKTSLWIRNIQMGIPSIVLSIVSVLVKDWKPVTQKGFFHGYNGVVVAVIILQAVGGLVVAVVVKYADNIRKSFATAVSIIISCTLSALLFDFKPTFTFLLGSAMVVGSVFLY 1090 V P E+ KL VP+LLYT+QNN+LY AL NLDAATY + YQ KILTTALFS +L ++ SATKW +L++LT+GVA+ Q+SG S + +E ++ +G + V+ A+CTSGF+GVYFE +LKGS+T+LW+RNIQMGIPS+++++V+V + D + V++KGFF GY+ +V+ VI +QAVGGL+VAVVVKYADN+ K FA++ SI+ SC +SA FDF+P FL+G+ +V+ S +Y Sbjct: 60 VCASPDEMLKLCVPSLLYTVQNNLLYLALTNLDAATYQILYQLKILTTALFSATMLGRQFSATKWCSLVVLTAGVAVVQVSG-SGDSHANGNED---RNRFVGLVAVLCASCTSGFSGVYFEKILKGSETTLWVRNIQMGIPSMIIALVTVFLGDSEEVSRKGFFVGYSPLVITVITVQAVGGLIVAVVVKYADNVLKVFASSFSILFSCIISAFAFDFRPNVLFLVGAFLVILSTAMY 294 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig533.13497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig533.13497.1 >prot_L-elsbetiae_contig533.13497.1 ID=prot_L-elsbetiae_contig533.13497.1|Name=mRNA_L-elsbetiae_contig533.13497.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=274bp MRTFTKKLRVEVAGKPREIAKLMVPALLYTIQNNMLYEALENLDAATYSVback to top mRNA from alignment at L-elsbetiae_contig533:16368..17661+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig533.13497.1 ID=mRNA_L-elsbetiae_contig533.13497.1|Name=mRNA_L-elsbetiae_contig533.13497.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1294bp|location=Sequence derived from alignment at L-elsbetiae_contig533:16368..17661+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig533:16368..17661+ >mRNA_L-elsbetiae_contig533.13497.1 ID=mRNA_L-elsbetiae_contig533.13497.1|Name=mRNA_L-elsbetiae_contig533.13497.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1644bp|location=Sequence derived from alignment at L-elsbetiae_contig533:16368..17661+ (Laminarionema elsbetiae ELsaHSoW15)back to top |