Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | signal peptide |
Exons | 1 |
Model size | 336 |
Cds size | 300 |
Stop | 1 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816546.415105-CDS-L-elsbetiae_contig529:18947..19247 | 1622816546.415105-CDS-L-elsbetiae_contig529:18947..19247 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig529 18948..19247 + |
1691683637.8247721-CDS-L-elsbetiae_contig529:18947..19247 | 1691683637.8247721-CDS-L-elsbetiae_contig529:18947..19247 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig529 18948..19247 + |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816546.430099-UTR-L-elsbetiae_contig529:19247..19281 | 1622816546.430099-UTR-L-elsbetiae_contig529:19247..19281 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig529 19248..19281 + |
1691683637.8369668-UTR-L-elsbetiae_contig529:19247..19281 | 1691683637.8369668-UTR-L-elsbetiae_contig529:19247..19281 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig529 19248..19281 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig529.13430.1 >prot_L-elsbetiae_contig529.13430.1 ID=prot_L-elsbetiae_contig529.13430.1|Name=mRNA_L-elsbetiae_contig529.13430.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=100bp
EGPTQTPFLAGQRVLAVRCLFLVLGALLCSRCHRPAAAAAAAAAAVQNAF FSLLSLGRFVLCLLVGAELSRPFRFSDFCIVRSEKKRENERETLFNTVN* back to topmRNA from alignment at L-elsbetiae_contig529:18948..19281+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig529.13430.1 ID=mRNA_L-elsbetiae_contig529.13430.1|Name=mRNA_L-elsbetiae_contig529.13430.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=334bp|location=Sequence derived from alignment at L-elsbetiae_contig529:18948..19281+ (Laminarionema elsbetiae ELsaHSoW15) GAGGGGCCGACGCAAACCCCTTTTTTGGCTGGACAGCGGGTCCTGGCTGT
TCGTTGTTTATTTTTAGTTTTGGGGGCTCTGCTCTGCTCTCGATGCCATC
GCCCCGCGGCGGCTGCTGCTGCTGCTGCCGCTGCTGTTCAAAACGCCTTC
TTTAGTCTCTTGTCGCTTGGTCGCTTTGTTTTGTGCCTATTGGTTGGAGC
TGAGCTCTCAAGGCCTTTTCGTTTTTCTGATTTTTGTATTGTGAGGAGCG
AAAAAAAAAGGGAAAACGAACGCGAAACGCTCTTCAATACGGTGAATTGA
ATTTTTGACCCTTTCACACTAGTATGCACACCGT back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig529:18948..19281+ >mRNA_L-elsbetiae_contig529.13430.1 ID=mRNA_L-elsbetiae_contig529.13430.1|Name=mRNA_L-elsbetiae_contig529.13430.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=600bp|location=Sequence derived from alignment at L-elsbetiae_contig529:18948..19281+ (Laminarionema elsbetiae ELsaHSoW15) GAGGGGCCGACGCAAACCCCTTTTTTGGCTGGACAGCGGGTCCTGGCTGT TCGTTGTTTATTTTTAGTTTTGGGGGCTCTGCTCTGCTCTCGATGCCATC GCCCCGCGGCGGCTGCTGCTGCTGCTGCCGCTGCTGTTCAAAACGCCTTC TTTAGTCTCTTGTCGCTTGGTCGCTTTGTTTTGTGCCTATTGGTTGGAGC TGAGCTCTCAAGGCCTTTTCGTTTTTCTGATTTTTGTATTGTGAGGAGCG AAAAAAAAAGGGAAAACGAACGCGAAACGCTCTTCAATACGGTGAATTGA GAGGGGCCGACGCAAACCCCTTTTTTGGCTGGACAGCGGGTCCTGGCTGT TCGTTGTTTATTTTTAGTTTTGGGGGCTCTGCTCTGCTCTCGATGCCATC GCCCCGCGGCGGCTGCTGCTGCTGCTGCCGCTGCTGTTCAAAACGCCTTC TTTAGTCTCTTGTCGCTTGGTCGCTTTGTTTTGTGCCTATTGGTTGGAGC TGAGCTCTCAAGGCCTTTTCGTTTTTCTGATTTTTGTATTGTGAGGAGCG AAAAAAAAAGGGAAAACGAACGCGAAACGCTCTTCAATACGGTGAATTGA back to top
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