Homology
BLAST of mRNA_L-elsbetiae_contig5289.13426.1 vs. uniprot
Match:
D7FSQ9_ECTSI (DOT1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSQ9_ECTSI)
HSP 1 Score: 89.0 bits (219), Expect = 1.850e-17
Identity = 75/105 (71.43%), Postives = 83/105 (79.05%), Query Frame = 3
Query: 219 LPRSPAPAMRGSGGDTPLSPPPRTPESRRSNAIVQSPS--GGMVDRRQLFKGQGXXXXXXXXXXXXXXXXXXXKSAARRPRSQSKTPAKRGTPQDVKVMRQGGAG 527
+PRSP+PA + P+SPPPRTPES S A+V+SPS GGMVDRRQLF G GXXXXXXXXXXXXXXXXXXX R +QSKTPAKRGTP+DVKVMRQGG G
Sbjct: 34 VPRSPSPAKQRKSAVIPMSPPPRTPESVSSTAVVESPSAGGGMVDRRQLFGGAGXXXXXXXXXXXXXXXXXXXXXGRR---AQSKTPAKRGTPKDVKVMRQGGDG 135
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5289.13426.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 1
0 1 Expect = 1.85e-17 / Id = 71.43 Sequence D7FSQ9_ECTSI
Match Name E-value Identity Description
D7FSQ9_ECTSI 1.850e-17 71.43 DOT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 90.5
Seed ortholog evalue 5.8e-16
Seed eggNOG ortholog 2880.D7FSQ9
Hectar predicted targeting category other localisation
EggNOG free text desc. Histone methylation protein DOT1
EggNOG OGs 2AVA3@1,2RZVU@2759
COG Functional cat. S
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
Ec32 ortholog description S-adenosyl-L-methionine-dependent methyltransferase
Ec32 ortholog Ec-03_002870.1
Exons 3
Model size 539
Cds size 366
Stop 0
Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622816546.229038-UTR-L-elsbetiae_contig5289:3005..3149 1622816546.229038-UTR-L-elsbetiae_contig5289:3005..3149 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig5289 3006..3149 +
1691683637.7017574-UTR-L-elsbetiae_contig5289:3005..3149 1691683637.7017574-UTR-L-elsbetiae_contig5289:3005..3149 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig5289 3006..3149 +
1622816546.240966-UTR-L-elsbetiae_contig5289:3344..3373 1622816546.240966-UTR-L-elsbetiae_contig5289:3344..3373 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig5289 3345..3373 +
1691683637.7185133-UTR-L-elsbetiae_contig5289:3344..3373 1691683637.7185133-UTR-L-elsbetiae_contig5289:3344..3373 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig5289 3345..3373 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622816546.254984-CDS-L-elsbetiae_contig5289:3373..3566 1622816546.254984-CDS-L-elsbetiae_contig5289:3373..3566 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5289 3374..3566 +
1691683637.7293053-CDS-L-elsbetiae_contig5289:3373..3566 1691683637.7293053-CDS-L-elsbetiae_contig5289:3373..3566 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5289 3374..3566 +
1622816546.2671945-CDS-L-elsbetiae_contig5289:5119..5292 1622816546.2671945-CDS-L-elsbetiae_contig5289:5119..5292 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5289 5120..5292 +
1691683637.7409122-CDS-L-elsbetiae_contig5289:5119..5292 1691683637.7409122-CDS-L-elsbetiae_contig5289:5119..5292 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5289 5120..5292 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5289.13426.1
>prot_L-elsbetiae_contig5289.13426.1 ID=prot_L-elsbetiae_contig5289.13426.1|Name=mRNA_L-elsbetiae_contig5289.13426.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp
MAREEKTAVDVTDPALPRSPAPAMRGSGGDTPLSPPPRTPESRRSNAIVQ SPSGGMVDRRQLFKGQGGGSSSSSNASTMPPPPTTPKSAARRPRSQSKTP AKRGTPQDVKVMRQGGAGSSSS back to top mRNA from alignment at L-elsbetiae_contig5289:3006..5292+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5289.13426.1 ID=mRNA_L-elsbetiae_contig5289.13426.1|Name=mRNA_L-elsbetiae_contig5289.13426.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2287bp|location=Sequence derived from alignment at L-elsbetiae_contig5289:3006..5292+ (Laminarionema elsbetiae ELsaHSoW15)GCGCACACCCCCACGAGAGACGAGAGAGAGAGAGAGAGAAAGACATCGGA
AGAGAAAGGGGTTTCGTGCGTTGGTGACAAGCAACGTATCCATCCCACGA
AGCACAGAGAGCAGGCGATCAGGGGAACTTACGGGCGAGCATTG GTACGT
GAACAAGTGTGTCTATCCTTGTCTCTCTCTCTCTTACTCTCTCCCGCCAA
AAAATCGTAGCACAGTAGTCACGCCCGCCGCGCCATACCACTAACACGTA
GGATATCATCACCAGGCCCAGCTGTGACATGACCCTCTGTGATCCTCAGC
CCGAGTCTCCGCTCTTCCGTTTTCTGCTCTCTCCAGCAGTCCAGCGCAAG
AGAAAGGGAGAGGTGAAA ATGGCGCGAGAGGAAAAAACTGCCGTTGATGT
CACAGACCCGGCTCTACCGCGCAGTCCAGCACCGGCCATGAGAGGGAGTG
GCGGCGATACCCCGCTTTCGCCACCGCCGCGCACCCCCGAGAGCAGGAGA
AGCAATGCCATCGTTCAGTCCCCTTCCGGAGGGATGGTCGATCGGCGCCA
ACTCTTCAAAG GTGAGTTTTCATCGCACATGTGGGACGTATTCGATTGCT
CTGGGTTGTGTGTCTCGTTTGTTCCGTTTGGGACCCGGAACCTGCCATAG
GTTGTGATGGTTCGCAAAGGGCGTTTATGCCGTACAACAGATGATTCATC
CTTTGTTTCAATCGTGTTGTATGGCAACCTGTTGCTGCCGTCTCTCTAAA
CCCGAGGATCCGGGCATATGTATGTAGTGCTCACCGAACAAAGAGAACCA
GCGGTCAACGTCGTCTGTAGCAGCAGGGGTACATTCAGCAGGTACACTCA
GCAGAACTAGCCAACGTACGGGCCGAACACAGAAGTATCATGCTACGGAG
GTTGTGTGTCGCCCCTTCTCTTCTGTCGGAAGATGTGTGGTGCGTGGATC
ATTCACCTCGCTATCCAGAGCAAAGTGATTAGACTACTTTTTTATCTCAA
GTGCGCGAGCGCAGCAGTCCCCCCCCCCTCTGTCCAGATCACGTGGACTA
CTACAACACATAACAATCTCGACACACCTCTTACAACCCGGCTGGTTTTG
TCACACTTGAGAAGCTTGACACCCACGCAATCAACCAGGGAAAGTTCTGG
TCACACTCTCCCGCACTCCATCAGCGATCTCTCGCCGTGTCTATTCTCAT
TGCGGGGGAGGGCGGTACATAGCCACGGAACATTTCGCGCCAAAACCAAC
GGCGTGTAGTACATACATTTGTATGGATCCCTTTTCTGTACCGCCATAAA
ACCATGTGTGCACAACTAATGTGCATGTGTACGAACAACAATAAAGCACC
GCTCGAGTATTTGAGCATTAGCTTGCCTTTGGATGGTGTGGGTATCTGCA
GGCGCAGGCTCCAAAAAAATAGTACTCCATTTAGAAGTACTTTATTTTTA
GTGGTACCTGGTATGTAGGTTGCACCGCCCCGCGTCTTAGTCAACGTGTA
GAGAGGCATGCACAGAGGGGTGCGGCAGGGAGAGACTGCAGTACTTGTTT
TGCTTGTGTGCCAAGCTCTGTGCCGATCTTCGTTGGGAAAACCGCACCAC
ATTAGGCTCGGACCGTTGTCGTTTTTTGTAGATCCCGAGGTCAAATGTCC
ATGTAGATACAACATTGTTTTCGACTATTTTAATGGCGTTTTTTGCGTGT
TTTTTCGTGTTTCGGCTTGCCGTGTCTTACATACATGTGTATCAGCTGTG
TCACTTGGCTGTGTGCATGGTTTGTCTATGGGCTTATCAATCAGCTTTTA
TTTAAATTGCACAGCTACATGTGTATTGCTAAAAATATCTGAACTACTCG
ACCAAGCCCCTGTCGACCAAGCCCCTGTTTTGGACCTTTTTTCTCGACAC
GCCACCCCTGCTTTTTAGTACAACATACTTACATATGTGCGTATATCATA
CGTAGGTACTAACGTACCAACTCACAATGAGGTTCACCTCTAAGTAGGCG
GTGGTTTTCACCCAACCAATTCACGCGACAAAAACAGCTCCTTCTTCGCT
CGATTCGATTAGACCATCTTGTACGGCGTGCATGCATGCACATGACGCAC
AATAAACGACCCAGGGCAAGGAGGCGGCAGCAGCAGCAGCAGCAACGCGA
GCACGATGCCACCGCCGCCGACGACACCCAAGTCCGCCGCCCGTCGGCCG
AGGTCTCAGTCTAAGACCCCCGCCAAGCGCGGGACGCCCCAGGACGTCAA
GGTCATGCGCCAGGGGGGGGCCGGGAGCAGCAGCAGC back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5289:3006..5292+
>mRNA_L-elsbetiae_contig5289.13426.1 ID=mRNA_L-elsbetiae_contig5289.13426.1|Name=mRNA_L-elsbetiae_contig5289.13426.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=732bp|location=Sequence derived from alignment at L-elsbetiae_contig5289:3006..5292+ (Laminarionema elsbetiae ELsaHSoW15) ATGGCGCGAGAGGAAAAAACTGCCGTTGATGTCACAGACCCGGCTCTACC GCGCAGTCCAGCACCGGCCATGAGAGGGAGTGGCGGCGATACCCCGCTTT CGCCACCGCCGCGCACCCCCGAGAGCAGGAGAAGCAATGCCATCGTTCAG TCCCCTTCCGGAGGGATGGTCGATCGGCGCCAACTCTTCAAAGATGGCGC GAGAGGAAAAAACTGCCGTTGATGTCACAGACCCGGCTCTACCGCGCAGT CCAGCACCGGCCATGAGAGGGAGTGGCGGCGATACCCCGCTTTCGCCACC GCCGCGCACCCCCGAGAGCAGGAGAAGCAATGCCATCGTTCAGTCCCCTT CCGGAGGGATGGTCGATCGGCGCCAACTCTTCAAAGGGCAAGGAGGCGGC AGCAGCAGCAGCAGCAACGCGAGCACGATGCCACCGCCGCCGACGACACC CAAGTCCGCCGCCCGTCGGCCGAGGTCTCAGTCTAAGACCCCCGCCAAGC GCGGGACGCCCCAGGACGTCAAGGTCATGCGCCAGGGGGGGGCCGGGAGC AGCAGCAGCGGCAAGGAGGCGGCAGCAGCAGCAGCAGCAACGCGAGCACG ATGCCACCGCCGCCGACGACACCCAAGTCCGCCGCCCGTCGGCCGAGGTC TCAGTCTAAGACCCCCGCCAAGCGCGGGACGCCCCAGGACGTCAAGGTCA TGCGCCAGGGGGGGGCCGGGAGCAGCAGCAGC back to top