mRNA_L-elsbetiae_contig49.12827.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: D7FJQ1_ECTSI (IFT27, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ1_ECTSI) HSP 1 Score: 404 bits (1037), Expect = 2.850e-139 Identity = 196/214 (91.59%), Postives = 206/214 (96.26%), Query Frame = 3 Query: 237 GSAAAPFQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIEGAESE 878 GS AAP QSGVRSMQT+HRTTLMLRAKVVVVGDACVGKT+VVQMFKSGGHDYPKNYIMTIGVDFGVKQVK+PETD VVELFLFDCPGQGVFNKLEQGAAYYENAAFVC+VFDVSNRDSFESCGRWLQGVRAALP SAPLPGV+IANK+DLREGGINARAVVETKEG+LFA QNGL+YFETS+AGAKGIDAPFHHMAT FH+TYEKTIEGAE E Sbjct: 10 GSVAAPSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKEGRLFALQNGLDYFETSAAGAKGIDAPFHHMATSFHETYEKTIEGAEGE 223
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A6H5KZL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL0_9PHAE) HSP 1 Score: 310 bits (794), Expect = 1.660e-102 Identity = 152/165 (92.12%), Postives = 160/165 (96.97%), Query Frame = 3 Query: 237 GSAAAPFQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETK 731 GS AAP QSGVRSMQT+HRTTLMLRAKVVVVGDACVGKT+VVQMFKSGGHDYPKNYIMTIGVDFGVKQVK+PETD VVELFLFDCPGQGVFNKLEQGAAYYENAAFVC+VFDVSNRDSFESCGRWLQGVRAALP+ SAPLPGV+IANK+DLREGGINARAVV T+ Sbjct: 10 GSVAAPSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSKSAPLPGVVIANKSDLREGGINARAVVGTE 174
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A7S2XVJ0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ0_9STRA) HSP 1 Score: 264 bits (675), Expect = 2.850e-84 Identity = 126/219 (57.53%), Postives = 170/219 (77.63%), Query Frame = 3 Query: 225 VMAPGSAAAPFQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIEGAESES 881 V+ +A F+S +RSM+++H+ LMLR KVV+VGDACVGK+A+VQMF GG YPKNY+MT GV F VKQV IP+T+ VEL+LFDC GQ +FN+ EQ +EN ++V +V+DV NRDSF+SC +WLQGVR+ S+ +PGVL+ANK+DLREGGIN+RA V +EG+ FA++N LE+FETS+A AK +DAPF+ +A+ FHQ YE+T++ AE+ S Sbjct: 15 VVTLDAAVTGFKSALRSMESAHKPLLMLRCKVVLVGDACVGKSALVQMFHGGGQRYPKNYVMTTGVGFCVKQVNIPDTNCAVELYLFDCAGQSIFNQREQNLKSWENTSYVVVVYDVGNRDSFQSCAKWLQGVRST--RQSSMIPGVLVANKSDLREGGINSRAAVSDEEGRNFAQENSLEFFETSAAEAKNVDAPFNFIASQFHQKYEQTVQRAEALS 231
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A835ZCC9_9STRA (IFT27, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC9_9STRA) HSP 1 Score: 258 bits (660), Expect = 1.920e-82 Identity = 124/199 (62.31%), Postives = 156/199 (78.39%), Query Frame = 3 Query: 276 MQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIEGAE 872 M+ H+ LMLR+KVV+VGDA VGKTA+ QM S GH+YPKNY+MT VDF VKQ+++PE + VELFLFDC GQGVFNKL+ A +++NA+FVC+VFDV NR+SF+SCGRWLQGVRA P A AP+PGVLI +KADLREG +RAVV+ +EG FA++NGL YFE S+A + G++APF HMA FH YE ++ AE Sbjct: 1 MEAQHKPLLMLRSKVVIVGDAYVGKTAITQMLISSGHNYPKNYLMTTDVDFSVKQIRLPEVNCCVELFLFDCAGQGVFNKLDLNAVHWDNASFVCVVFDVCNRESFQSCGRWLQGVRATRPTA-APMPGVLIGSKADLREG---SRAVVDAQEGARFAQENGLAYFEVSAAMSSGVEAPFQHMAQQFHTMYEASMRKAE 195
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A7S3JRK5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRK5_9STRA) HSP 1 Score: 234 bits (597), Expect = 7.870e-73 Identity = 121/211 (57.35%), Postives = 152/211 (72.04%), Query Frame = 3 Query: 240 SAAAPFQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIEGAE 872 S+A +QS VRSM++ HR+ LMLR KVVVVGDA VGK+A++ MF SGG +PK Y+MT VDF VKQV IPE+ + VEL+LFDC GQ +FN++E A+YENA+F+CLV+DVSN SFESCG+WLQ V + P+ LPGVLIANK DL GG R VV T++GQ FA N L YFETS+ + D PF H+A +F + YE TI A+ Sbjct: 6 SSAVEYQSAVRSMESGHRSILMLRCKVVVVGDAAVGKSALISMFHSGGSSFPKQYLMTAWVDFRVKQVSIPESSTAVELYLFDCGGQSIFNQIEANNAHYENASFLCLVYDVSNASSFESCGKWLQMVSKSRPS----LPGVLIANKKDL--GGELGRRVVSTQKGQEFASANNLAYFETSALEGE-FDEPFRHIAIEFAKKYEDTIAHAQ 209
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A7S3M1Q0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1Q0_9STRA) HSP 1 Score: 229 bits (585), Expect = 4.740e-71 Identity = 105/203 (51.72%), Postives = 153/203 (75.37%), Query Frame = 3 Query: 255 FQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIE 863 QSG+RSM+TSH+T ++LR K+++VGDACVGKTA+ Q F SGG YPKNY+MTIG +F VKQV IPET+ +VELF++DC GQ +FN+L+ + YYENA+ V +V++V+NRDS SC +W+ GV+A + + PL G + NK + R+G I++RA V+ E + A+ G+ YFETS+A G+DAPF ++A +F++ YE+T++ Sbjct: 1 MQSGLRSMETSHKTMVILRCKLILVGDACVGKTALTQSFVSGGTTYPKNYLMTIGAEFNVKQVTIPETNVIVELFIYDCAGQSIFNQLDLNSKYYENASAVMVVYNVANRDSLLSCNKWVSGVKA-IQNSGVPLVGAFVGNKCEFRDGSIDSRAEVDILEAKETAESLGMTYFETSAANNIGVDAPFQYIAEEFYRRYEETVQ 202
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A7S0SQ35_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQ35_9STRA) HSP 1 Score: 221 bits (562), Expect = 2.390e-67 Identity = 101/204 (49.51%), Postives = 153/204 (75.00%), Query Frame = 3 Query: 261 SGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIEGAE 872 SG+RSM + H++ +LR K+V++GD+CVGK++++Q+F+SGG YPKNY+MTIG DF VKQV IP+T+ VVEL++FDC GQ +FN+LE + YYENAA V +V+D+ N+++ +S +WL G+++A+ S L GVL+ NK+D R+G +++RA V ++ Q F+K GL YFE S+A G+ PF H+AT+F++ YE T+ A+ Sbjct: 14 SGIRSMDSKHKSLTVLRCKLVIIGDSCVGKSSLLQVFQSGGTTYPKNYMMTIGADFNVKQVPIPDTNIVVELYIFDCAGQPIFNQLEMNSKYYENAAAVMVVYDIGNQETLQSTTKWLTGLKSAVSNPS-DLIGVLVGNKSDYRDGSVDSRAEVVKEDAQRFSKDLGLAYFEASAASNIGVTEPFLHVATEFYKKYEDTLRKAD 216
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A8J2SZ95_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZ95_9STRA) HSP 1 Score: 217 bits (553), Expect = 5.060e-66 Identity = 111/207 (53.62%), Postives = 145/207 (70.05%), Query Frame = 3 Query: 252 PFQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIEGAE 872 P +S +RSM+T+HRT LMLR KVVVVGDA VGK+A++ MF SGG YPK Y+MT VDF VKQV IP+T + VEL+LFDC G VFN++E+ A+ Y+ A F+ +V+DV+ DSF SC +W+QGVR LPGVL+ANK DL E R VV+ + G+ FAK+NGL YFETS+ + PF H+A +F + YE+T+ AE Sbjct: 24 PMESCLRSMETTHRTILMLRCKVVVVGDATVGKSALISMFHSGGASYPKQYVMTSWVDFRVKQVDIPDTSTAVELYLFDCAGDPVFNQVEENASQYDQAGFLFVVYDVTKEDSFASCAKWIQGVRKGREDR---LPGVLVANKIDLEE-----RRVVDEQRGRDFAKENGLVYFETSALQGN-YEGPFRHVAMEFAKKYEETVARAE 221
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A067BYM3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BYM3_SAPPC) HSP 1 Score: 213 bits (543), Expect = 8.190e-65 Identity = 108/205 (52.68%), Postives = 146/205 (71.22%), Query Frame = 3 Query: 261 SGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIEGAES 875 SG+RSM+T+H +T++LR K VVVGDA +GKTA++Q KS GHDYPKNYIMT + VK + IPET+++VEL+L DCPGQ +FN+ E G+ ++E A + LVFDV++++SF+SC +W Q V A PA + + GVLI NKAD +EG R + TKE + FA+QN L+YFE S+ IDAPF HMAT F + Y+ E AE+ Sbjct: 2 SGLRSMETTHTSTVVLRCKAVVVGDAGIGKTALLQTLKSSGHDYPKNYIMTSSPELIVKSLPIPETNAIVELYLLDCPGQSIFNQREFGSMHFEGACMIVLVFDVNSKESFKSCIKWYQEV--ANPAPNHQISGVLIGNKADEKEGN---RDAISTKEAEDFAEQNNLKYFECSARLGTNIDAPFLHMATTFKKKYDDLAERAEN 201
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Match: A0A0N7L680_PLAHL (Intraflagellar transport protein 27 homolog n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L680_PLAHL) HSP 1 Score: 213 bits (542), Expect = 1.050e-64 Identity = 101/203 (49.75%), Postives = 147/203 (72.41%), Query Frame = 3 Query: 261 SGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETDSVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAASAPLPGVLIANKADLREGGINARAVVETKEGQLFAKQNGLEYFETSSAGAKGIDAPFHHMATDFHQTYEKTIEGA 869 SG+RSM+T+H++T +LR KV +VG+A VGKTAVVQ+ KS GH++PKNY+MT V+ K + IP+T+ VVEL+LFDC GQ +FN+L+ G +Y+ A+ +VFDV+N++SF+SC +W Q VR A P + +PGVL+ANK DLR N R + TKE + FAK+N +++FE S+ G++APF ++A FH+ Y+ T + A Sbjct: 2 SGLRSMETTHKSTTVLRCKVAIVGEATVGKTAVVQILKSNGHEFPKNYVMTSDVELSTKSISIPDTNVVVELYLFDCAGQSIFNQLDFGTVHYKGASIALVVFDVNNKESFKSCSKWYQDVRDASPNHN--IPGVLLANKTDLR---YNNRDAISTKEAEEFAKRNDMKFFECSAQQNAGVEAPFVYIADWFHKKYQATTQRA 199 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig49.12827.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig49.12827.1 >prot_L-elsbetiae_contig49.12827.1 ID=prot_L-elsbetiae_contig49.12827.1|Name=mRNA_L-elsbetiae_contig49.12827.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp MSRVMAPGSAAAPFQSGVRSMQTSHRTTLMLRAKVVVVGDACVGKTAVVQback to top mRNA from alignment at L-elsbetiae_contig49:10817..13788- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig49.12827.1 ID=mRNA_L-elsbetiae_contig49.12827.1|Name=mRNA_L-elsbetiae_contig49.12827.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2972bp|location=Sequence derived from alignment at L-elsbetiae_contig49:10817..13788- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig49:10817..13788- >mRNA_L-elsbetiae_contig49.12827.1 ID=mRNA_L-elsbetiae_contig49.12827.1|Name=mRNA_L-elsbetiae_contig49.12827.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1374bp|location=Sequence derived from alignment at L-elsbetiae_contig49:10817..13788- (Laminarionema elsbetiae ELsaHSoW15)back to top |