mRNA_L-elsbetiae_contig4888.12808.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig4888.12808.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 164 bits (416), Expect = 2.150e-40 Identity = 119/269 (44.24%), Postives = 152/269 (56.51%), Query Frame = 1 Query: 622 ADPLLQRTNSSSGMTSVXXXXXXXXXXXXXXXELVQQLGIMGCGGASGGAHALKLAAEINRADIMGVLTGAGVIDSTGIALIVAAEFCHEAAVKCLVAHHGGKNGSGFR--YTNHRSKTGRTALFNAI--IFSRPSPRIVRLLVDAGADATTTVRVLDASGGLT-NTTPLGLTADLLRKNEMG-GKDASEERRHRLEAIRRLLLRLEAVHARSWLWWSGDASLGVHTAEKSVTKKAPSVPLVS-MLPVLRLRASKNGVVLVPLFRYSRK 1407 A+PLL +T+ T+V EL+Q+LGI GC S GAHAL AA DIM +LT AGV+D TG AL +AA HEA+VK L+ H + G G Y N R G T L FS+ +PRIVR+LVDAGAD T+ V+V++ GG+ N TPL T LRK + GK A++E RLEAI RLLLR++AVHA SWLW SG +G T T P +P + MLP+L+ R + ++ L RYS K Sbjct: 264 ANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVD-TGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQ-APRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATE----TDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVK 526
BLAST of mRNA_L-elsbetiae_contig4888.12808.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 156 bits (395), Expect = 3.600e-38 Identity = 104/235 (44.26%), Postives = 137/235 (58.30%), Query Frame = 1 Query: 718 ELVQQLGIMGCGGASGGAHALKLAAEINRADIMGVLTGAGVIDSTGIALIVAAEFCHEAAVKCLVAHHGGKNGSGFRYTNHRSKTGRTALFNAI-IFSRPSPRIVRLLVDAGADATTTVRVLDASGGLTNT-TPLGLTADLLRKNEMGGKDASEERRHRLEAIRRLLLRLEAVHARSWLWWSGDASLGVHTAEKSVTKKAPSVP---LVSMLPVLRLRASKNGVVLVPLFRYSRK 1407 EL+QQLG+ GCGG S G +L+LAA DIMG+LT GV+D TG AL+VAAE+ E +VK L+ H G G + N GRT L I SPRI R L+D GAD +TV V + T+ TPLG LR+N++GGK+A+EE+ L+AI RLL ++EAVHA SWLW S D +G H + ++ P+ L M VLR K GVVL ++R + + Sbjct: 198 ELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVD-TGRALVVAAEYSREESVKFLLQHQAG--GGTWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIG-HAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYRAAEE 428
BLAST of mRNA_L-elsbetiae_contig4888.12808.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 153 bits (387), Expect = 4.180e-37 Identity = 114/267 (42.70%), Postives = 147/267 (55.06%), Query Frame = 1 Query: 619 KADPLLQRTNSSSGMTSVXXXXXXXXXXXXXXXELVQQLGIMGCGGASGGAHALKLAAEINRADIMGVLTGAGVIDSTGIALIVAAEFCHEAAVKCLVAH-HGGKNGSGFRYTNHRSKTGRTALFNAIIFSRPSPRIVRLLVDAGADATTTVRVLDASGGL-TNTTPLGLTADLLRKNE--MGGKDASEERRHRLEAIRRLLLRLEAVHARSWLWWSGDASLGVHTAEKSVTKKAPSVPLVSMLPVLRLRASKNGVVLVPLFRYSRK 1407 KADPLL SG T + EL++Q+GI GCGG+SGG AL+ AA+ +IM +LT AGV+D TG+AL+VAA + E +K L+ K Y N R + G T L I RP R+VRLLV+AGAD T+ V V + GG + TPLGLT + +R +G AS E+ H+LEAIRRLLLR+EAVHA SWLW S +++ A + A S + + V R RA V L L RYS K Sbjct: 171 KADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVD-TGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYRP--RVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSK 434
BLAST of mRNA_L-elsbetiae_contig4888.12808.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 150 bits (378), Expect = 5.820e-36 Identity = 104/239 (43.51%), Postives = 139/239 (58.16%), Query Frame = 1 Query: 718 ELVQQLGIMGCGGASGGAHALKLAAEINRADIMGVLTGAGVIDSTGIALIVAAEFCHEAAVKCLVAHHGGKNGSGFRYTNHRSKTGRTALFNAIIF-----SRPSPRIVRLLVDAGADATTTVRVLDASGG-LTNTTPLGLTADLLRKNEMGGKDASEERRHRLEAIRRLLLRLEAVHARSWLWWSGDASLGV---HTAEKSVTKKAPSVPLVSMLPVLRLRASKNGVVLVPLFRYSRK 1407 EL+Q++GI GCGG S G AL +A E R M +LT AGV+D TG AL ++A EA+VK L+ +H G G Y N R + G T L ++I PR+ RLLV+AGAD TT +R ++ G L + TPL LT +L+ ++ G S++R RLE IRRLLL++EAVHA SWLW S G + AE + A + L +LP+LR RA + GVV L R+ RK Sbjct: 187 ELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVD-TGQALTISAGLGREASVKYLLQNHAKHYGPG-AYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRK 423
BLAST of mRNA_L-elsbetiae_contig4888.12808.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 140 bits (353), Expect = 2.420e-34 Identity = 95/201 (47.26%), Postives = 124/201 (61.69%), Query Frame = 1 Query: 808 DIMGVLTGAGVIDSTGIALIVAAEFCHEAAVKCLVAHHGGKNG-SGFRYTNHRSKTGRTALFNAIIF-SRPSPRIVRLLVDAGADATTTVRVLDASGGLT-NTTPLGLTADLLRKNEMGGKDASEERRHRLEAIRRLLLRLEAVHARSWLWWSGDASLGVHTAEKSVTKKAPSVPLVSMLPVLRLRASKNGVVLVPLFRYS 1401 DIM +LTGAGV D+ G L+ A EA+V+ L+ ++ S Y N +G T L +I + S +PRIVRLLVDAGAD T+TVRV + +GG+ N TPL +T LLR+ + GK A+EE+ HRL+AIRRLLLR++AVHA SWLW S DA VH E+S + PL LP+L+ RA V + L R S Sbjct: 6 DIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSIEWCSSGNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPS-DAPSIVHAVERSCGPEPRRPPLSLTLPILKRRAKTCHVFVATLLRSS 205
BLAST of mRNA_L-elsbetiae_contig4888.12808.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 142 bits (359), Expect = 3.080e-33 Identity = 112/272 (41.18%), Postives = 140/272 (51.47%), Query Frame = 1 Query: 619 KADPLLQRTNSSSGMTSVXXXXXXXXXXXXXXXELVQQLGIMGCGGASGGAHALKLAAEINRADIMGVLTGAGVIDSTGIALIVAAEFCHEAAVKCLVAHHGGKNGSGFRYTNH-RSKTGRTALFNAI---IFSRPSPRIVRLLVDAGADATTTVRVLDASGGLTNT-TPLGLTADLLRKNEMGGKDASEERRHRLEAIRRLLLRLEAVHARSWLWWSGDASLGVH---TAEKSVTKKAPSVP-LVSMLPVLRLRASKNGVVLVPLFRYSRK 1407 KA+PLL R N + + EL+Q+ GI GCGG +GG AL+LAA D+M LT AGV+D TGIAL+ A F H VK L+ G Y + R GRT L I + SP++VRLLVDAGAD T+ VR G L TPL L + LR K +E RLE IRRLLLR+EAVHA SWLW +G +G+ TA + + P L ++LP+LR RA G V L RY+ K Sbjct: 170 KANPLLTRVNLA--WQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVD-TGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVK 438
BLAST of mRNA_L-elsbetiae_contig4888.12808.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 142 bits (359), Expect = 3.560e-33 Identity = 109/271 (40.22%), Postives = 150/271 (55.35%), Query Frame = 1 Query: 619 KADPLLQRTNSSSGMTSVXXXXXXXXXXXXXXXELVQQLGIMGCGGASGGAHALKLAAEINRADIMGVLTGAGVIDSTGIALIVAAEFCHEAAVKCLVAH-HGGKNGSGFRYTNHRSKTGRTALFNAIIFSRPSPRIVRLLVDAGADATTTVRVLDASGGLT-NTTPLGLTADLLRKNEMGGKDASE---ERRHRLEAIRRLLLRLEAVHARSWLWWSGDASLGVHTAE---KSVTKKAPSVPLVSMLPVLRLRASKNGVVLVPLFRYSRK 1407 KADPLL + S + EL++Q+GI GCGG+SGG +AL+ AA +R DIM +LT AGV+D TG+AL+VAA + EA +K L+ G K+ Y N + G T+L + I R PR+V+LLV+AGAD T+ V + + G + TPLGLT LL GG+ A E +++LE IRRLLLR EAVHA SWLW S ++ TA+ ++ + P + ++ R R K +L L RYS K Sbjct: 171 KADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVD-TGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGI--QRCRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLL-----GGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKG--LLAALLRYSSK 431
BLAST of mRNA_L-elsbetiae_contig4888.12808.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 142 bits (357), Expect = 5.100e-33 Identity = 108/272 (39.71%), Postives = 146/272 (53.68%), Query Frame = 1 Query: 619 KADPLLQRTNSSSGMTSVXXXXXXXXXXXXXXXELVQQLGIMGCGGASGGAHALKLAAEINRADIMGVLTGAGVIDSTGIALIVAAEFCHEAAVKCLVAHHGGKNGSGFRYTNH-RSKTGRTALFNAIIFSRP---SPRIVRLLVDAGADATTTVRV--LDASGGLTNTTPLGLTADLLRKNEMGGKDASEERRHRLEAIRRLLLRLEAVHARSWLWWSGDASLGVHTAEKSVTKKAPSV---PLVSMLPVLRLRASKNGVVLVPLFRYSRK 1407 KA+PLL +++ G++ V E+++Q+GI GCGG SGG AL+ AA+ + M VL AG + TG ALI+AAE AVK L+ + Y N R GRT + A+ SP+IVRLLVDAGA+ T V V + T+ TPL T LLR+ + G+ A++E+ RL+ R LL R EAVHA SWLW SG+ A + T+ A + PL +M P+LR + GV+L LFRYSRK Sbjct: 168 KANPLLC-SHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRR---RQADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435
BLAST of mRNA_L-elsbetiae_contig4888.12808.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 140 bits (352), Expect = 1.440e-32 Identity = 106/268 (39.55%), Postives = 143/268 (53.36%), Query Frame = 1 Query: 619 KADPLLQRTNSSSGMTSVXXXXXXXXXXXXXXXELVQQLGIMGCGGASGGAHALKLAAEINRADIMGVLTGAGVIDSTGIALIVAAEFCHEAAVKCLVAHHGGKNGSGFRYTN-HRSKTGRTALFNAIIFSRP---SPRIVRLLVDAGADATTTVRV-LDASGGLTNTTPLGLTADLLRKNEMGGKDASEERRHRLEAIRRLLLRLEAVHARSWLWWSGDASLGVHTAEKSVTKKAPSVPLVSMLPVLRLRASKNGVVLVPLFRYSRK 1407 KA+PLL ++ SSG + V EL+++ GI CGG SGG AL++AA + DIM +L AGV+D G+AL+ A EAAV L+ + + Y N R G TAL + ++ +PRI R LVDAGAD T+ V++ S N TPL D + G A++E+ RLEA RR+LLR+ AVHA SW+W S DA L A T K L ++LPVLR RA + ++ LFRYS+K Sbjct: 141 KANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQTS--YVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPS-DAPLLARPANSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRYSKK 405
BLAST of mRNA_L-elsbetiae_contig4888.12808.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 140 bits (352), Expect = 2.110e-32 Identity = 99/260 (38.08%), Postives = 129/260 (49.62%), Query Frame = 1 Query: 628 PLLQRTNSSSGMTSVXXXXXXXXXXXXXXXELVQQLGIMGCGGASGGAHALKLAAEINRADIMGVLTGAGVIDSTGIALIVAAEFCHEAAVKCLVAHHGGKNGSGFRYTNHRSKTGRTALFNAIIFSRPSPRIVRLLVDAGADATTTVRVLDASGGLTNTTPLGLTADLLRKNEMGGKDASEERRHRLEAIRRLLLRLEAVHARSWLWWSGDASLGVHTAEKSVTKKAPSVPLVSMLPVLRLRASKNGVVLVPLFRYSRK 1407 PLL T SSG T V ELVQ+ GI GC GAS G AL AA D+M +L AGV+D TG AL+ E A+K L+ G + R G T L +A+ SPR+VRLLVDAGADAT VRV D G T TPL L + + A+ ++ L A RRLLL++E VHA SWLW +++ T+ PL S LP++ R+++ G L +FR ++K Sbjct: 170 PLLP-TRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVD-TGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPLLSAVTTGPCSPRVVRLLVDAGADATLAVRVPDGFGRSTKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFRLAKK 427 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4888.12808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4888.12808.1 >prot_L-elsbetiae_contig4888.12808.1 ID=prot_L-elsbetiae_contig4888.12808.1|Name=mRNA_L-elsbetiae_contig4888.12808.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=427bp MPPPRCPPNQLHAAAGRGNERMVLAQLAKGCHIDQGTPTGCTALIIAAGEback to top mRNA from alignment at L-elsbetiae_contig4888:10419..12681- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig4888.12808.1 ID=mRNA_L-elsbetiae_contig4888.12808.1|Name=mRNA_L-elsbetiae_contig4888.12808.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2263bp|location=Sequence derived from alignment at L-elsbetiae_contig4888:10419..12681- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig4888:10419..12681- >mRNA_L-elsbetiae_contig4888.12808.1 ID=mRNA_L-elsbetiae_contig4888.12808.1|Name=mRNA_L-elsbetiae_contig4888.12808.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2562bp|location=Sequence derived from alignment at L-elsbetiae_contig4888:10419..12681- (Laminarionema elsbetiae ELsaHSoW15)back to top |