mRNA_L-elsbetiae_contig2142.6547.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2142.6547.1 vs. uniprot
Match: D7FWP1_ECTSI (HIT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP1_ECTSI) HSP 1 Score: 169 bits (428), Expect = 1.950e-51 Identity = 77/105 (73.33%), Postives = 90/105 (85.71%), Query Frame = 1 Query: 1 DILAKGVVWNARGEMQSCLFCDFTQRSKEKEILFEDNLVAAFGPQKPAAKQHLLVVPKKHISTVGDLTPEDNQVLERMREVAEQLLKCDASNMQFSFHIPPWNSI 315 DI++KGVVWNARGEMQSCLFCDF +KEKE+L+ED+LV AF P KPAAKQH+LVVPK+HISTVGDL D +L+RM+EVA +LLKCDAS Q SFHIPPWNS+ Sbjct: 33 DIVSKGVVWNARGEMQSCLFCDFANHTKEKELLYEDDLVIAFSPLKPAAKQHILVVPKRHISTVGDLVETDTPLLDRMKEVAVKLLKCDASQTQLSFHIPPWNSV 137
BLAST of mRNA_L-elsbetiae_contig2142.6547.1 vs. uniprot
Match: U9TE69_RHIID (HIT domain-containing protein n=4 Tax=Rhizophagus irregularis TaxID=588596 RepID=U9TE69_RHIID) HSP 1 Score: 80.1 bits (196), Expect = 5.980e-17 Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = 1 Query: 46 QSCLFCDFTQRSKEKEILFEDNLVAAFGPQKPAAKQHLLVVPKKHISTVGDLTPEDNQVLERMREVAEQLLK---CDASNMQFSFHIPPWNSI 315 Q C+FCD T +K+I++ED + AF PAAK HLL++P+ HI V LTP D +L+ M + QLL S + FH+PP+NS+ Sbjct: 14 QDCVFCDLT----DKKIVYEDERIVAFHDISPAAKLHLLIIPRNHIDNVDSLTPNDAPLLKHMIDTGNQLLSESGYQLSERRVGFHVPPYNSV 102
BLAST of mRNA_L-elsbetiae_contig2142.6547.1 vs. uniprot
Match: UPI00077B98B9 (histidine triad nucleotide-binding protein 3 isoform X1 n=2 Tax=Tetranychus urticae TaxID=32264 RepID=UPI00077B98B9) HSP 1 Score: 79.3 bits (194), Expect = 2.230e-16 Identity = 36/103 (34.95%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 16 GVVWNARGEMQSCLFCDFTQRSKEKEILFEDNLVAAFGPQKPAAKQHLLVVPKKHISTVGDLTPEDNQVLERMREVAEQLLK---CDASNMQFSFHIPPWNSI 315 G+ N + +C+FC R E I +ED+ AF PA+ H+L++PK+HI + LT +D ++ERM+++A L++ D+++ + FH PP+NSI Sbjct: 27 GMARNINPVINNCIFCSIVSRKAEATIKYEDDAYLAFKDIYPASDTHILIIPKRHIKDIKSLTTDDLPIIERMKDIAINLIRENALDSNDTRLGFHKPPFNSI 129
BLAST of mRNA_L-elsbetiae_contig2142.6547.1 vs. uniprot
Match: K5WFJ8_PHACS (HIT domain-containing protein n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) TaxID=650164 RepID=K5WFJ8_PHACS) HSP 1 Score: 79.0 bits (193), Expect = 3.900e-16 Identity = 37/91 (40.66%), Postives = 55/91 (60.44%), Query Frame = 1 Query: 52 CLFCDFTQRSKEKEILFEDNLVAAFGPQKPAAKQHLLVVPKKHISTVGDLTPEDNQVLERMREVAEQLL---KCDASNMQFSFHIPPWNSI 315 C+FCD + R K ++++ED F PAAK HLLV+PK+H+ +V L P D +++RM E+ LL A++ FHIPP+NS+ Sbjct: 35 CVFCDIS-REKGFDVVWEDETFIVFNDHSPAAKHHLLVIPKRHVESVKTLKPSDAPMIQRMSEIGHSLLGELSVPAASRMMGFHIPPFNSV 124
BLAST of mRNA_L-elsbetiae_contig2142.6547.1 vs. uniprot
Match: A0A067R9E6_ZOONE (Histidine triad nucleotide-binding protein 3 n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067R9E6_ZOONE) HSP 1 Score: 77.0 bits (188), Expect = 7.870e-16 Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 49 SCLFCDFTQRSKEKEILFEDNLVAAFGPQKPAAKQHLLVVPKKHISTVGDLTPEDNQVLERMREVAEQLLK---CDASNMQFSFHIPPWNSI 315 +C+FC ++ EIL++D+ F KPAAK H L+V ++HI LT E V+E++ E+A+Q+L D S+++F FH PP+NSI Sbjct: 7 NCVFCRICNGKEQSEILYKDDEYVVFPDIKPAAKHHYLIVTREHIQNAKQLTTEHRHVVEKLIEIAKQVLTEEGADLSDVRFGFHWPPFNSI 98
BLAST of mRNA_L-elsbetiae_contig2142.6547.1 vs. uniprot
Match: K3XBI6_GLOUD (HIT domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBI6_GLOUD) HSP 1 Score: 80.5 bits (197), Expect = 8.970e-16 Identity = 44/118 (37.29%), Postives = 68/118 (57.63%), Query Frame = 1 Query: 13 KGVVWNARGEMQSCLFCDFTQRSKEKEILFEDNLVAAFGPQKPAAKQHLLVVPKKHISTVGDLTPEDNQVLERMREVAEQLLKC-----------DAS------NMQFSFHIPPWNSI 315 KGV + G + C FCD + K++E L+ED+++A F P P + H+LVVP+ HI V LT + Q+L RM++VAE +L+ ++S + +F+FH PP+NSI Sbjct: 146 KGVKYGRDGAVVCCRFCDILHK-KDEEFLYEDDMIAVFRPLSPVVESHILVVPRCHIRNVNMLTQDHVQLLSRMKQVAETVLRAMPPSXXXXXKPESSAVSSDVDYKFAFHTPPFNSI 262
BLAST of mRNA_L-elsbetiae_contig2142.6547.1 vs. uniprot
Match: A0A662WLK2_9STRA (HIT domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLK2_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.070e-15 Identity = 48/122 (39.34%), Postives = 64/122 (52.46%), Query Frame = 1 Query: 13 KGVVWNARGEMQSCLFCDFTQRSKEKEILFEDNLVAAFGPQKPAAKQHLLVVPKKHISTVGDLTPEDNQVLERMREVAEQLLK--------------------CDA-SNMQFSFHIPPWNSI 315 KGV + GE+ SC FC+ S E L+ED V F P P H+LVVP++HI V LTP+D +L+RMR VA +L+ DA S+ +F+FH PP+NSI Sbjct: 138 KGVTYAHDGELVSCRFCEILNASDEP-FLYEDEDVVVFRPLAPVVMSHILVVPRRHIRNVNKLTPDDADLLKRMRNVAASVLREMPRPSKSEGNHVSTGAITDNDAESDYKFAFHTPPFNSI 258
BLAST of mRNA_L-elsbetiae_contig2142.6547.1 vs. uniprot
Match: A0A2J7RA74_9NEOP (HIT domain-containing protein n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RA74_9NEOP) HSP 1 Score: 76.3 bits (186), Expect = 2.240e-15 Identity = 35/93 (37.63%), Postives = 58/93 (62.37%), Query Frame = 1 Query: 46 QSCLFCDFTQRSKEKEILFEDNLVAAFGPQKPAAKQHLLVVPKKHISTVGDLTPEDNQVLERMREVAEQLLK---CDASNMQFSFHIPPWNSI 315 ++C+FC ++ EIL++D+ F KPAA+ H L+V +KHI LT E ++E++ ++A+Q+L D S+++F FH PP+NSI Sbjct: 21 ENCVFCRICNEEEQSEILYKDDEYVVFPDIKPAARHHYLIVTRKHIRNAKQLTVEHKSLVEKLVQIAKQVLNENGADLSDVRFGFHWPPFNSI 113
BLAST of mRNA_L-elsbetiae_contig2142.6547.1 vs. uniprot
Match: A0A3M6VX09_9STRA (HIT domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VX09_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 2.280e-14 Identity = 43/133 (32.33%), Postives = 64/133 (48.12%), Query Frame = 1 Query: 1 DILAKGVVWNARGEMQSCLFCDFTQRSKEKEILFEDNLVAAFGPQKPAAKQHLLVVPKKHISTVGDLTPEDNQVLERMREVAEQLLK-----------------------CDAS-----NMQFSFHIPPWNSI 315 + KGV + G + SC FC+ + KE L++D V F P P H+LVVP++HI V +LTP++ +L RMRE+A +L+ C + +F+FH PP+NSI Sbjct: 120 SVAKKGVTYGHNGTLVSCRFCEILESGKET-FLYQDEDVVVFRPLAPVVVSHILVVPRRHIRNVSELTPDEATLLRRMREIAAMILREMPRPLEVLAPSKAERAYDVAEDCTDEEDYEPDFKFAFHSPPFNSI 251
BLAST of mRNA_L-elsbetiae_contig2142.6547.1 vs. uniprot
Match: L0KCL9_HALHC (HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) TaxID=748449 RepID=L0KCL9_HALHC) HSP 1 Score: 71.2 bits (173), Expect = 8.110e-14 Identity = 35/71 (49.30%), Postives = 45/71 (63.38%), Query Frame = 1 Query: 43 MQSCLFCDFTQRSKEKEILFEDNLVAAFGPQKPAAKQHLLVVPKKHISTVGDLTPEDNQVLERMREVAEQL 255 M+ CLFC E +IL+ED V AF KP A HLL+VPKKHIST+ DL EDN ++ + +VA +L Sbjct: 1 MEDCLFCKIVSGDVESDILYEDEQVIAFQDIKPQAPVHLLIVPKKHISTLLDLKEEDNNLVGHIYQVANKL 71 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2142.6547.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2142.6547.1 >prot_L-elsbetiae_contig2142.6547.1 ID=prot_L-elsbetiae_contig2142.6547.1|Name=mRNA_L-elsbetiae_contig2142.6547.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=105bp DILAKGVVWNARGEMQSCLFCDFTQRSKEKEILFEDNLVAAFGPQKPAAKback to top mRNA from alignment at L-elsbetiae_contig2142:5327..5641- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2142.6547.1 ID=mRNA_L-elsbetiae_contig2142.6547.1|Name=mRNA_L-elsbetiae_contig2142.6547.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=315bp|location=Sequence derived from alignment at L-elsbetiae_contig2142:5327..5641- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2142:5327..5641- >mRNA_L-elsbetiae_contig2142.6547.1 ID=mRNA_L-elsbetiae_contig2142.6547.1|Name=mRNA_L-elsbetiae_contig2142.6547.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=630bp|location=Sequence derived from alignment at L-elsbetiae_contig2142:5327..5641- (Laminarionema elsbetiae ELsaHSoW15)back to top |